Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f03r
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    28   0.36 
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    28   0.36 
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   4.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   7.8  

>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 651 ENSTVRVTIQSPQLKGGASANRGGSR 728
           E++T  VTIQ+PQL     A  GGSR
Sbjct: 347 ESTTAGVTIQAPQLDINTVAAGGGSR 372


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +3

Query: 651 ENSTVRVTIQSPQLKGGASANRGGSR 728
           E++T  VTIQ+PQL     A  GGSR
Sbjct: 347 ESTTAGVTIQAPQLDINTVAAGGGSR 372


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 37  KYILYIVKSNRIFILITVLYFSFN 108
           KY+L+    N + IL+TV+  ++N
Sbjct: 297 KYLLFTFIMNTVSILVTVIIINWN 320


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = -2

Query: 542 EPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGE 378
           EP    ++    ++GEPGND    + G    +  RG  G   E G  G     GE
Sbjct: 215 EPARHPENYNKGQKGEPGNDGLEGLPGPQGEVGPRGFPGRPGEKGVPGTPGVRGE 269


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +3

Query: 633 PNSRAHENSTVRVTIQSPQLKGGASANRGGSRCTIN*ANSQS 758
           P+S ++ NST  +    P   GG +   G  R + + + S S
Sbjct: 373 PSSGSNANSTAGLNNNEPDTAGGGTVGDGKKRSSRSRSKSLS 414


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = -2

Query: 500 GEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPL 321
           G PGND     +G      QRG  G   E G  GP  + G      +R R      +GP 
Sbjct: 606 GRPGNDGLPGPQG------QRGLPGPQGEKGDQGPPGFIGPKGDKGERDRDGLNGLNGP- 658

Query: 320 KCVKLDRAR--FERVLGL 273
           + +K DR     E V GL
Sbjct: 659 QGMKGDRGMPGLEGVAGL 676


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,288
Number of Sequences: 2352
Number of extensions: 14398
Number of successful extensions: 28
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)