Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11f03r
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase ... 227 9e-60
U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase ... 227 9e-60
U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase ... 227 9e-60
J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein ( C.ele... 225 3e-59
AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying de... 93 3e-19
AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying de... 93 3e-19
AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying de... 93 3e-19
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 93 3e-19
AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying de... 64 1e-10
AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying de... 46 2e-05
U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF038621-2|AAK71385.1| 329|Caenorhabditis elegans Hypothetical ... 34 0.096
AC006676-6|AAK71384.2| 652|Caenorhabditis elegans Hypothetical ... 32 0.39
AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical ... 30 1.6
AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical ... 30 1.6
U39667-7|AAP31442.1| 324|Caenorhabditis elegans Disorganized mu... 30 2.1
U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized mu... 30 2.1
AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L) prot... 30 2.1
AF500489-1|AAM21705.1| 324|Caenorhabditis elegans DIM-1 short p... 30 2.1
>U39652-8|AAK82909.1| 334|Caenorhabditis elegans Protein kinase
protein 2, isoform b protein.
Length = 334
Score = 227 bits (554), Expect = 9e-60
Identities = 110/177 (62%), Positives = 135/177 (76%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
++LIYGTPRAATV A+T +KLW +DR +YRRILMGS +KR+MYDEFLS+V IL L++W
Sbjct: 156 LALIYGTPRAATVIAKTDVKLWAIDRLTYRRILMGSVTKKRKMYDEFLSKVQILADLDQW 215
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSD 390
ER VADALE F +V QG+PG++F+II+EG A VLQ+R VG LG SD
Sbjct: 216 ERANVADALERCDFEPGTHVVEQGQPGDEFFIILEGEANVLQKRSDDAPFDVVGHLGMSD 275
Query: 389 YFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVLGLCADILKRNIAQYNSFVSL 219
YFGEIALLLDRPRAATV A LKC+KLDR RFERV+G +ILKR+++ YNS+V L
Sbjct: 276 YFGEIALLLDRPRAATVVAKTHLKCIKLDRNRFERVMGPVREILKRDVSNYNSYVKL 332
Score = 72.5 bits (170), Expect = 3e-13
Identities = 50/152 (32%), Positives = 79/152 (51%)
Frame = -2
Query: 677 DRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQG 498
D Y+++++ RR + + + + LE+ E+ T+ DA+ PV + ETI+ QG
Sbjct: 62 DDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQG 121
Query: 497 EPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLK 318
E G++FY+I +GT V E V G S FGE+AL+ PRAATV A +K
Sbjct: 122 EEGDNFYVIDKGTVDVY----VNHEYVLTINEGGS--FGELALIYGTPRAATVIAKTDVK 175
Query: 317 CVKLDRARFERVLGLCADILKRNIAQYNSFVS 222
+DR + R+ L + K+ Y+ F+S
Sbjct: 176 LWAIDRLTYRRI--LMGSVTKKR-KMYDEFLS 204
>U39652-7|AAA80405.2| 366|Caenorhabditis elegans Protein kinase
protein 2, isoform a protein.
Length = 366
Score = 227 bits (554), Expect = 9e-60
Identities = 110/177 (62%), Positives = 135/177 (76%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
++LIYGTPRAATV A+T +KLW +DR +YRRILMGS +KR+MYDEFLS+V IL L++W
Sbjct: 188 LALIYGTPRAATVIAKTDVKLWAIDRLTYRRILMGSVTKKRKMYDEFLSKVQILADLDQW 247
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSD 390
ER VADALE F +V QG+PG++F+II+EG A VLQ+R VG LG SD
Sbjct: 248 ERANVADALERCDFEPGTHVVEQGQPGDEFFIILEGEANVLQKRSDDAPFDVVGHLGMSD 307
Query: 389 YFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVLGLCADILKRNIAQYNSFVSL 219
YFGEIALLLDRPRAATV A LKC+KLDR RFERV+G +ILKR+++ YNS+V L
Sbjct: 308 YFGEIALLLDRPRAATVVAKTHLKCIKLDRNRFERVMGPVREILKRDVSNYNSYVKL 364
Score = 72.5 bits (170), Expect = 3e-13
Identities = 50/152 (32%), Positives = 79/152 (51%)
Frame = -2
Query: 677 DRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQG 498
D Y+++++ RR + + + + LE+ E+ T+ DA+ PV + ETI+ QG
Sbjct: 94 DDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQG 153
Query: 497 EPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLK 318
E G++FY+I +GT V E V G S FGE+AL+ PRAATV A +K
Sbjct: 154 EEGDNFYVIDKGTVDVY----VNHEYVLTINEGGS--FGELALIYGTPRAATVIAKTDVK 207
Query: 317 CVKLDRARFERVLGLCADILKRNIAQYNSFVS 222
+DR + R+ L + K+ Y+ F+S
Sbjct: 208 LWAIDRLTYRRI--LMGSVTKKR-KMYDEFLS 236
>U39652-6|ABI18144.1| 376|Caenorhabditis elegans Protein kinase
protein 2, isoform c protein.
Length = 376
Score = 227 bits (554), Expect = 9e-60
Identities = 110/177 (62%), Positives = 135/177 (76%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
++LIYGTPRAATV A+T +KLW +DR +YRRILMGS +KR+MYDEFLS+V IL L++W
Sbjct: 198 LALIYGTPRAATVIAKTDVKLWAIDRLTYRRILMGSVTKKRKMYDEFLSKVQILADLDQW 257
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSD 390
ER VADALE F +V QG+PG++F+II+EG A VLQ+R VG LG SD
Sbjct: 258 ERANVADALERCDFEPGTHVVEQGQPGDEFFIILEGEANVLQKRSDDAPFDVVGHLGMSD 317
Query: 389 YFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVLGLCADILKRNIAQYNSFVSL 219
YFGEIALLLDRPRAATV A LKC+KLDR RFERV+G +ILKR+++ YNS+V L
Sbjct: 318 YFGEIALLLDRPRAATVVAKTHLKCIKLDRNRFERVMGPVREILKRDVSNYNSYVKL 374
Score = 72.5 bits (170), Expect = 3e-13
Identities = 50/152 (32%), Positives = 79/152 (51%)
Frame = -2
Query: 677 DRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQG 498
D Y+++++ RR + + + + LE+ E+ T+ DA+ PV + ETI+ QG
Sbjct: 104 DDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQG 163
Query: 497 EPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLK 318
E G++FY+I +GT V E V G S FGE+AL+ PRAATV A +K
Sbjct: 164 EEGDNFYVIDKGTVDVY----VNHEYVLTINEGGS--FGELALIYGTPRAATVIAKTDVK 217
Query: 317 CVKLDRARFERVLGLCADILKRNIAQYNSFVS 222
+DR + R+ L + K+ Y+ F+S
Sbjct: 218 LWAIDRLTYRRI--LMGSVTKKR-KMYDEFLS 246
>J05220-1|AAA27980.1| 376|Caenorhabditis elegans protein (
C.elegans cAMP-dependentprotein kinase subunit R mRNA,
complete cds. ).
Length = 376
Score = 225 bits (550), Expect = 3e-59
Identities = 109/177 (61%), Positives = 135/177 (76%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
++LIYGTPRAATV A+ +KLW +DR +YRRILMGS +KR+MYDEFLS+V IL L++W
Sbjct: 198 LALIYGTPRAATVIAKIDVKLWAIDRLTYRRILMGSVTKKRKMYDEFLSKVQILADLDQW 257
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSD 390
ER+ VADALE F +V QG+PG++F+II+EG A VLQ+R VG LG SD
Sbjct: 258 ERVNVADALERCDFEPGTHVVEQGQPGDEFFIILEGEANVLQKRSDDAPFDVVGHLGMSD 317
Query: 389 YFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVLGLCADILKRNIAQYNSFVSL 219
YFGEIALLLDRPRAATV A LKC+KLDR RFERV+G +ILKR+++ YNS+V L
Sbjct: 318 YFGEIALLLDRPRAATVVAKTHLKCIKLDRNRFERVMGPVREILKRDVSNYNSYVKL 374
Score = 71.7 bits (168), Expect = 5e-13
Identities = 50/152 (32%), Positives = 79/152 (51%)
Frame = -2
Query: 677 DRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQG 498
D Y+++++ RR + + + + LE+ E+ T+ DA+ PV + ETI+ QG
Sbjct: 104 DDTEYKKVVIPKDDATRRSLESAMRKNLLFAHLEEDEQKTMYDAMFPVEKSAGETIIEQG 163
Query: 497 EPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLK 318
E G++FY+I +GT V E V G S FGE+AL+ PRAATV A +K
Sbjct: 164 EEGDNFYVIDKGTVDVY----VNHEYVLTINEGGS--FGELALIYGTPRAATVIAKIDVK 217
Query: 317 CVKLDRARFERVLGLCADILKRNIAQYNSFVS 222
+DR + R+ L + K+ Y+ F+S
Sbjct: 218 LWAIDRLTYRRI--LMGSVTKKR-KMYDEFLS 246
>AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying
defective protein 4,isoform c protein.
Length = 749
Score = 92.7 bits (220), Expect = 3e-19
Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
++++Y R A+V+A T ++LW LDR ++ I + + FL++VSI ++L +
Sbjct: 236 LAILYNCTRTASVQALTDVQLWVLDRSVFQMITQRLGMERHSQLMNFLTKVSIFQNLSED 295
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSD 390
+AD ++ ++ I+RQGE G+ F++I G V QQ E E+ L D
Sbjct: 296 RISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGETEPREIRVLNQGD 355
Query: 389 YFGEIALLLDRPRAATVRAHGP-LKCVKLDRARFERVLG 276
+FGE ALL + R A + A P ++ + LDR F +++G
Sbjct: 356 FFGERALLGEEVRTANIIAQAPGVEVLTLDRESFGKLIG 394
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/120 (21%), Positives = 62/120 (51%)
Frame = -2
Query: 641 TIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEG 462
T+ ++M + + + L+ L K + + + + + + + ++++GEPG+ +++ EG
Sbjct: 154 TVGAKQMIRDAVQKNDFLKQLAKEQIIELVNCMYEMRARAGQWVIQEGEPGDRLFVVAEG 213
Query: 461 TAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERV 282
V + E +G++ GE+A+L + R A+V+A ++ LDR+ F+ +
Sbjct: 214 ELQVSR------EGALLGKMRAGTVMGELAILYNCTRTASVQALTDVQLWVLDRSVFQMI 267
>AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying
defective protein 4,isoform e protein.
Length = 743
Score = 92.7 bits (220), Expect = 3e-19
Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
++++Y R A+V+A T ++LW LDR ++ I + + FL++VSI ++L +
Sbjct: 230 LAILYNCTRTASVQALTDVQLWVLDRSVFQMITQRLGMERHSQLMNFLTKVSIFQNLSED 289
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSD 390
+AD ++ ++ I+RQGE G+ F++I G V QQ E E+ L D
Sbjct: 290 RISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGETEPREIRVLNQGD 349
Query: 389 YFGEIALLLDRPRAATVRAHGP-LKCVKLDRARFERVLG 276
+FGE ALL + R A + A P ++ + LDR F +++G
Sbjct: 350 FFGERALLGEEVRTANIIAQAPGVEVLTLDRESFGKLIG 388
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/120 (21%), Positives = 62/120 (51%)
Frame = -2
Query: 641 TIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEG 462
T+ ++M + + + L+ L K + + + + + + + ++++GEPG+ +++ EG
Sbjct: 148 TVGAKQMIRDAVQKNDFLKQLAKEQIIELVNCMYEMRARAGQWVIQEGEPGDRLFVVAEG 207
Query: 461 TAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERV 282
V + E +G++ GE+A+L + R A+V+A ++ LDR+ F+ +
Sbjct: 208 ELQVSR------EGALLGKMRAGTVMGELAILYNCTRTASVQALTDVQLWVLDRSVFQMI 261
>AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying
defective protein 4,isoform b protein.
Length = 737
Score = 92.7 bits (220), Expect = 3e-19
Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
++++Y R A+V+A T ++LW LDR ++ I + + FL++VSI ++L +
Sbjct: 224 LAILYNCTRTASVQALTDVQLWVLDRSVFQMITQRLGMERHSQLMNFLTKVSIFQNLSED 283
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSD 390
+AD ++ ++ I+RQGE G+ F++I G V QQ E E+ L D
Sbjct: 284 RISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGETEPREIRVLNQGD 343
Query: 389 YFGEIALLLDRPRAATVRAHGP-LKCVKLDRARFERVLG 276
+FGE ALL + R A + A P ++ + LDR F +++G
Sbjct: 344 FFGERALLGEEVRTANIIAQAPGVEVLTLDRESFGKLIG 382
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/120 (21%), Positives = 62/120 (51%)
Frame = -2
Query: 641 TIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEG 462
T+ ++M + + + L+ L K + + + + + + + ++++GEPG+ +++ EG
Sbjct: 142 TVGAKQMIRDAVQKNDFLKQLAKEQIIELVNCMYEMRARAGQWVIQEGEPGDRLFVVAEG 201
Query: 461 TAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERV 282
V + E +G++ GE+A+L + R A+V+A ++ LDR+ F+ +
Sbjct: 202 ELQVSR------EGALLGKMRAGTVMGELAILYNCTRTASVQALTDVQLWVLDRSVFQMI 255
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 92.7 bits (220), Expect = 3e-19
Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
++++Y R A+V+A T ++LW LDR ++ I + + FL++VSI ++L +
Sbjct: 267 LAILYNCTRTASVQALTDVQLWVLDRSVFQMITQRLGMERHSQLMNFLTKVSIFQNLSED 326
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAVEVGRLGPSD 390
+AD ++ ++ I+RQGE G+ F++I G V QQ E E+ L D
Sbjct: 327 RISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGETEPREIRVLNQGD 386
Query: 389 YFGEIALLLDRPRAATVRAHGP-LKCVKLDRARFERVLG 276
+FGE ALL + R A + A P ++ + LDR F +++G
Sbjct: 387 FFGERALLGEEVRTANIIAQAPGVEVLTLDRESFGKLIG 425
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/120 (21%), Positives = 62/120 (51%)
Frame = -2
Query: 641 TIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEG 462
T+ ++M + + + L+ L K + + + + + + + ++++GEPG+ +++ EG
Sbjct: 185 TVGAKQMIRDAVQKNDFLKQLAKEQIIELVNCMYEMRARAGQWVIQEGEPGDRLFVVAEG 244
Query: 461 TAVVLQQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERV 282
V + E +G++ GE+A+L + R A+V+A ++ LDR+ F+ +
Sbjct: 245 ELQVSR------EGALLGKMRAGTVMGELAILYNCTRTASVQALTDVQLWVLDRSVFQMI 298
>AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying
defective protein 4,isoform f protein.
Length = 470
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Frame = -2
Query: 599 VSILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEA 420
VSI ++L + +AD ++ ++ I+RQGE G+ F++I G V QQ E
Sbjct: 7 VSIFQNLSEDRISKMADVMDQDYYDGGHYIIRQGEKGDAFFVINSGQVKVTQQIEGETEP 66
Query: 419 VEVGRLGPSDYFGEIALLLDRPRAATVRAHGP-LKCVKLDRARFERVLG 276
E+ L D+FGE ALL + R A + A P ++ + LDR F +++G
Sbjct: 67 REIRVLNQGDFFGERALLGEEVRTANIIAQAPGVEVLTLDRESFGKLIG 115
>AF067612-5|AAM98011.3| 195|Caenorhabditis elegans Egg laying
defective protein 4,isoform d protein.
Length = 195
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/77 (29%), Positives = 43/77 (55%)
Frame = -2
Query: 725 RAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADA 546
+ A+V+A T ++LW LDR ++ I + + FL++VSI ++L + +AD
Sbjct: 87 KTASVQALTDVQLWVLDRSVFQMITQRLGMERHSQLMNFLTKVSIFQNLSEDRISKMADV 146
Query: 545 LEPVSFNDSETIVRQGE 495
++ ++ I+RQGE
Sbjct: 147 MDQDYYDGGHYIIRQGE 163
>U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical
protein C09G4.2a protein.
Length = 581
Score = 42.3 bits (95), Expect = 4e-04
Identities = 32/106 (30%), Positives = 51/106 (48%)
Frame = -2
Query: 596 SILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAV 417
S L +L+ + ++ A+ PV I+RQG+ G+ Y+I EG V++ +
Sbjct: 35 SFLRNLDATQIEKISSAMYPVEVPAGAIIIRQGDLGSIMYVIQEGKVQVVKD-NRFVRTM 93
Query: 416 EVGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVL 279
E G L FGE+A+L R ATVRA ++R F ++
Sbjct: 94 EDGAL-----FGELAILHHCERTATVRAIESCHLWAIERNVFHAIM 134
Score = 34.3 bits (75), Expect = 0.096
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 4/153 (2%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
+++++ R ATVRA S LW ++R+ + I+M S K + L + +
Sbjct: 102 LAILHHCERTATVRAIESCHLWAIERNVFHAIMMESAREKTMSFKRHLKYSARFGGYPEE 161
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQ----RGAGGEAVEVGRL 402
L +A+ + ++ E +V + + Y++ G+ + Q + G+ E+ R
Sbjct: 162 VLLRIAEFCTEMRYDAREELVVKPQ---YVYLVCRGSVLCDDQGEVSKIVAGQDFEL-RC 217
Query: 401 GPSDYFGEIALLLDRPRAATVRAHGPLKCVKLD 303
G F E +L+ P A ++ H C LD
Sbjct: 218 GRKGRF-ERFFVLEGP-AHLIKMHVEQLCKALD 248
>U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical
protein C09G4.2c protein.
Length = 617
Score = 42.3 bits (95), Expect = 4e-04
Identities = 32/106 (30%), Positives = 51/106 (48%)
Frame = -2
Query: 596 SILESLEKWERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQRGAGGEAV 417
S L +L+ + ++ A+ PV I+RQG+ G+ Y+I EG V++ +
Sbjct: 71 SFLRNLDATQIEKISSAMYPVEVPAGAIIIRQGDLGSIMYVIQEGKVQVVKD-NRFVRTM 129
Query: 416 EVGRLGPSDYFGEIALLLDRPRAATVRAHGPLKCVKLDRARFERVL 279
E G L FGE+A+L R ATVRA ++R F ++
Sbjct: 130 EDGAL-----FGELAILHHCERTATVRAIESCHLWAIERNVFHAIM 170
Score = 34.3 bits (75), Expect = 0.096
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 4/153 (2%)
Frame = -2
Query: 749 ISLIYGTPRAATVRARTSLKLWGLDRDSYRRILMGSTIRKRRMYDEFLSRVSILESLEKW 570
+++++ R ATVRA S LW ++R+ + I+M S K + L + +
Sbjct: 138 LAILHHCERTATVRAIESCHLWAIERNVFHAIMMESAREKTMSFKRHLKYSARFGGYPEE 197
Query: 569 ERLTVADALEPVSFNDSETIVRQGEPGNDFYIIVEGTAVVLQQ----RGAGGEAVEVGRL 402
L +A+ + ++ E +V + + Y++ G+ + Q + G+ E+ R
Sbjct: 198 VLLRIAEFCTEMRYDAREELVVKPQ---YVYLVCRGSVLCDDQGEVSKIVAGQDFEL-RC 253
Query: 401 GPSDYFGEIALLLDRPRAATVRAHGPLKCVKLD 303
G F E +L+ P A ++ H C LD
Sbjct: 254 GRKGRF-ERFFVLEGP-AHLIKMHVEQLCKALD 284
>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
protein T20G5.5 protein.
Length = 1234
Score = 38.3 bits (85), Expect = 0.006
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Frame = -2
Query: 623 MYDEFLSRVSILESLEKWERLTVADALEPVSFNDSETIV-RQGEPGNDFYIIVEGTAVVL 447
+Y+E L+ + L L + +++ ++ + + ++V RQGE G +YI+++G V
Sbjct: 562 VYEE-LTFIKALSHLSTMVKRQLSNFVKVEQYVHAGSVVFRQGEIGVYWYIVLKGAVEV- 619
Query: 446 QQRGAGGEAVEVGRLGPSDYFGEIALLLDRPRAATVRAH-GPLKCVKLDRARFERVL 279
G+ V + R G D FG++AL+ D PRAAT+ + + +D+ F ++L
Sbjct: 620 ---NVNGKIVCLLREG--DDFGKLALVNDLPRAATIVTYEDDSMFLVVDKHHFNQIL 671
>AF038621-2|AAK71385.1| 329|Caenorhabditis elegans Hypothetical
protein M116.4 protein.
Length = 329
Score = 34.3 bits (75), Expect = 0.096
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = +1
Query: 25 NL*NKYILYIVKSNRIFILITVLYFSFNLVNRKNKTEQT*ASA-----QIN*VSYLDIVL 189
NL K I Y++K+ + LI ++ FSF KN+TE+ +A Q++ V + I L
Sbjct: 13 NLPEKSIRYVLKNMK---LIDLIGFSFTSAVAKNQTERLGLNAKSMYVQLSCVINISIYL 69
Query: 190 QKFHRNFYTESDTKLL 237
K NFY +DT L
Sbjct: 70 PKRSTNFYLLTDTTFL 85
>AC006676-6|AAK71384.2| 652|Caenorhabditis elegans Hypothetical
protein M04F3.5 protein.
Length = 652
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -3
Query: 400 ALQTTSARSRCCWTGREPPPCALTARSNASSSTVPDLKEFLVSVPTFSRETSPNTTALY 224
++Q R R R PPP T++ A++ T P + E ++ T S ++ LY
Sbjct: 559 SMQNQQVRMRTTSASRPPPPARRTSQITAATPTAPSVAEQRMNGSTMGSRQSLDSAGLY 617
>AF016687-8|AAK72065.1| 737|Caenorhabditis elegans Hypothetical
protein T21D12.9c protein.
Length = 737
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 514 VSLSLKDTGSNASATVSRSHFSKLSNIETLERNSSYILRFLIVEPMRIRR*ESRSSPHN- 690
V++ D SN+ + HFS + + TL+ ++I R+R+ ES N
Sbjct: 171 VNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNM 230
Query: 691 LREVR 705
+REVR
Sbjct: 231 IREVR 235
>AF016687-7|AAK72063.1| 881|Caenorhabditis elegans Hypothetical
protein T21D12.9a protein.
Length = 881
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 514 VSLSLKDTGSNASATVSRSHFSKLSNIETLERNSSYILRFLIVEPMRIRR*ESRSSPHN- 690
V++ D SN+ + HFS + + TL+ ++I R+R+ ES N
Sbjct: 171 VNIEKLDLASNSITDIGTDHFSSFNTLVTLKLARNHITTLNQFSFSRLRKLESLDLTRNM 230
Query: 691 LREVR 705
+REVR
Sbjct: 231 IREVR 235
>U39667-7|AAP31442.1| 324|Caenorhabditis elegans Disorganized
muscle protein 1,isoform b protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -2
Query: 707 ARTSLKLWGLDRDSY-RRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVS 531
A +LKL G ++ + + S + M EF ++ SILE W++L A E ++
Sbjct: 94 ANFNLKLTGFSSPTFVEKPQISSRDDGQVMVMEFRAK-SILEPTFVWQKLVGGGAEEIIA 152
Query: 530 FNDSETIVRQGEPGNDFYIIVE 465
+D V++ E GN +Y +E
Sbjct: 153 NSDRIKAVKKLEAGNVYYSALE 174
>U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized
muscle protein 1,isoform a protein.
Length = 640
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -2
Query: 707 ARTSLKLWGLDRDSY-RRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVS 531
A +LKL G ++ + + S + M EF ++ SILE W++L A E ++
Sbjct: 410 ANFNLKLTGFSSPTFVEKPQISSRDDGQVMVMEFRAK-SILEPTFVWQKLVGGGAEEIIA 468
Query: 530 FNDSETIVRQGEPGNDFYIIVE 465
+D V++ E GN +Y +E
Sbjct: 469 NSDRIKAVKKLEAGNVYYSALE 490
>AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L)
protein.
Length = 640
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -2
Query: 707 ARTSLKLWGLDRDSY-RRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVS 531
A +LKL G ++ + + S + M EF ++ SILE W++L A E ++
Sbjct: 410 ANFNLKLTGFSSPTFVEKPQISSRDDGQVMVMEFRAK-SILEPTFVWQKLVGGGAEEIIA 468
Query: 530 FNDSETIVRQGEPGNDFYIIVE 465
+D V++ E GN +Y +E
Sbjct: 469 NSDRIKAVKKLEAGNVYYSALE 490
>AF500489-1|AAM21705.1| 324|Caenorhabditis elegans DIM-1 short
protein isoform protein.
Length = 324
Score = 29.9 bits (64), Expect = 2.1
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -2
Query: 707 ARTSLKLWGLDRDSY-RRILMGSTIRKRRMYDEFLSRVSILESLEKWERLTVADALEPVS 531
A +LKL G ++ + + S + M EF ++ SILE W++L A E ++
Sbjct: 94 ANFNLKLTGFSSPTFVEKPQISSRDDGQVMVMEFRAK-SILEPTFVWQKLVGGGAEEIIA 152
Query: 530 FNDSETIVRQGEPGNDFYIIVE 465
+D V++ E GN +Y +E
Sbjct: 153 NSDRIKAVKKLEAGNVYYSALE 174
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,961,369
Number of Sequences: 27780
Number of extensions: 313218
Number of successful extensions: 959
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -