Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f03f
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   3.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 70  FIPKKLKFTMDILSLFNSIYFLI 2
           F P  L+F ++ILS+F  +  ++
Sbjct: 312 FRPSSLRFCLNILSIFTYVPMIL 334


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 70  FIPKKLKFTMDILSLFNSIYFLI 2
           F P  L+F ++ILS+F  +  ++
Sbjct: 37  FRPSSLRFCLNILSIFTYVPMIL 59


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 612 TVSPGRHWTGNIASNISALSDSSKCVN 532
           T  PG  +TG+   N   L DSS C+N
Sbjct: 48  TCKPG--FTGSNCQNRINLCDSSPCLN 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,564
Number of Sequences: 336
Number of extensions: 2719
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)