Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f02r
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.4  
AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    23   7.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 521  NSNLTVEYHDVKTRGFDTIKII 456
            N NL+ +Y  VK    DT KI+
Sbjct: 1098 NQNLSADYRLVKAHDKDTFKIV 1119


>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
 Frame = -1

Query: 671 ADDPKNIKRPCPNFDLNCIREYFSRNSQCQLVMGSVPDPLPLNYYRVDIPNSNLTVEYHD 492
           ADD K I R C N   N     FS +S    +       +   +  +   N++   E H 
Sbjct: 49  ADDVKRIVRTCMNKITNAGGGNFSSSSSSSTIERDRACLMQCFFEEMKATNADGFPEKHK 108

Query: 491 VK---TRGFDTIKIIEFYINSKTE 429
           V    T+     ++ EFY++S  E
Sbjct: 109 VLHVITKDIREHELREFYVDSIQE 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,595
Number of Sequences: 2352
Number of extensions: 12452
Number of successful extensions: 69
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)