Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f02f
         (637 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    25   0.70 
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    25   0.70 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   4.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.9  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 341 KTEKLVLAAEVQSLKLASPKTIFKYNRKAKEPIVRSDALEVDY 469
           KT  LVL   V S+  A+ K   KY+      I++SD L  +Y
Sbjct: 2   KTLVLVLFVAVLSVVFAADKYTTKYDNIDLNQILKSDRLLKNY 44


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 341 KTEKLVLAAEVQSLKLASPKTIFKYNRKAKEPIVRSDALEVDY 469
           KT  LVL   V S+  A+ K   KY+      I++SD L  +Y
Sbjct: 2   KTLVLVLFVAVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNY 44


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 146 FDLNCIREYFSRNSQCQLVMGSV 214
           FD+ C+  Y  + S+  L++ SV
Sbjct: 475 FDVKCVSNYTKQQSKIHLIVRSV 497



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 180 LEKYSRMQFKSKFGQGLLMFFGSS 109
           L K  R+ F   FG GLL+ FG S
Sbjct: 861 LSKLIRL-FNEIFGHGLLLMFGIS 883



 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 159 QFKSKFGQGLLMFFGSS 109
           +F   FG GLL+ FG S
Sbjct: 591 RFNEIFGLGLLLMFGVS 607


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 454 CVTSYNWLFGFPIVFENCF 398
           CV  +N +FG+ I+F + F
Sbjct: 147 CVIYFNRIFGWNILFGHIF 165


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 340 QNRKTSISSRSAV-LKIGFAENNFQIQ*ESQRANCKK 447
           + R   I  R  V LKI   E+  Q+  +++RA C++
Sbjct: 90  KTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,881
Number of Sequences: 336
Number of extensions: 3102
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)