Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f01f
         (581 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9W3T5 Cluster: CG32736-PA, isoform A; n=4; Diptera|Rep...   102   7e-21
UniRef50_Q8WVI0 Cluster: SNHG8 protein; n=2; Homo/Pan/Gorilla gr...    62   9e-09
UniRef50_Q4RJY1 Cluster: Chromosome 9 SCAF15033, whole genome sh...    61   2e-08
UniRef50_UPI0000EB18EA Cluster: SNHG8 protein; n=3; Laurasiather...    60   4e-08
UniRef50_Q8BZ92 Cluster: 16 days neonate cerebellum cDNA, RIKEN ...    53   4e-06
UniRef50_Q69YU5 Cluster: Putative uncharacterized protein DKFZp5...    42   0.008
UniRef50_A3EV58 Cluster: 4-amino-4-deoxy-L-arabinose transferase...    34   2.1  
UniRef50_Q59JR8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_Q245R4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_A2EKW4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.5  
UniRef50_Q687H5 Cluster: DegP-like serine protease 1 precursor; ...    32   8.6  
UniRef50_A0C1Y0 Cluster: Chromosome undetermined scaffold_143, w...    32   8.6  
UniRef50_Q0UVU4 Cluster: Putative uncharacterized protein; n=1; ...    32   8.6  

>UniRef50_Q9W3T5 Cluster: CG32736-PA, isoform A; n=4; Diptera|Rep:
           CG32736-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 79

 Score =  102 bits (244), Expect = 7e-21
 Identities = 40/60 (66%), Positives = 53/60 (88%)
 Frame = +1

Query: 82  IQKLVNKWPGKRAFGIYRFLPIFFLLGASLEFSMINWKVGEVNFYNTFKKRQARDLIEEK 261
           +++L++ WPGK+ FG+YRFLP+FFLLGA LEFSMINW VGE NFY TFK+RQA++ +EE+
Sbjct: 8   VRRLLDSWPGKKRFGVYRFLPLFFLLGAGLEFSMINWTVGETNFYRTFKRRQAKNYVEEQ 67


>UniRef50_Q8WVI0 Cluster: SNHG8 protein; n=2; Homo/Pan/Gorilla
           group|Rep: SNHG8 protein - Homo sapiens (Human)
          Length = 120

 Score = 62.1 bits (144), Expect = 9e-09
 Identities = 22/62 (35%), Positives = 45/62 (72%)
 Frame = +1

Query: 82  IQKLVNKWPGKRAFGIYRFLPIFFLLGASLEFSMINWKVGEVNFYNTFKKRQARDLIEEK 261
           +++++ + PGK+ FGIYRFLP FF+LG ++E+ MI  +VG+  FY+ ++++ +    + +
Sbjct: 57  VRRILQRVPGKQRFGIYRFLPFFFVLGGTMEWIMIKVRVGQETFYDVYRRKASERQYQRR 116

Query: 262 IK 267
           ++
Sbjct: 117 LE 118


>UniRef50_Q4RJY1 Cluster: Chromosome 9 SCAF15033, whole genome
           shotgun sequence; n=10; Euteleostomi|Rep: Chromosome 9
           SCAF15033, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 71

 Score = 61.3 bits (142), Expect = 2e-08
 Identities = 24/53 (45%), Positives = 39/53 (73%)
 Frame = +1

Query: 106 PGKRAFGIYRFLPIFFLLGASLEFSMINWKVGEVNFYNTFKKRQARDLIEEKI 264
           PGKR  GIYRFLPIFF +G  +E+ MIN ++G+  FY+ ++++++    ++KI
Sbjct: 16  PGKRPLGIYRFLPIFFCIGGVMEWVMINVRIGKETFYDVYRRKKSEREYQQKI 68


>UniRef50_UPI0000EB18EA Cluster: SNHG8 protein; n=3;
           Laurasiatheria|Rep: SNHG8 protein - Canis familiaris
          Length = 83

 Score = 60.1 bits (139), Expect = 4e-08
 Identities = 21/65 (32%), Positives = 45/65 (69%)
 Frame = +1

Query: 82  IQKLVNKWPGKRAFGIYRFLPIFFLLGASLEFSMINWKVGEVNFYNTFKKRQARDLIEEK 261
           +++++ + PGK+  G+YRFLP FF+LG ++E+ MI  +VG+  FY+ ++++ +    + +
Sbjct: 10  VRRVLQRVPGKQRLGVYRFLPFFFVLGGTMEWIMIKLRVGQETFYDVYRRKASERQYQRR 69

Query: 262 IKKYS 276
           ++  S
Sbjct: 70  LENAS 74


>UniRef50_Q8BZ92 Cluster: 16 days neonate cerebellum cDNA, RIKEN
           full-length enriched library, clone:9630053E15
           product:HYPOTHETICAL 13.9 kDa PROTEIN homolog; n=1; Mus
           musculus|Rep: 16 days neonate cerebellum cDNA, RIKEN
           full-length enriched library, clone:9630053E15
           product:HYPOTHETICAL 13.9 kDa PROTEIN homolog - Mus
           musculus (Mouse)
          Length = 102

 Score = 53.2 bits (122), Expect = 4e-06
 Identities = 21/44 (47%), Positives = 33/44 (75%)
 Frame = +1

Query: 82  IQKLVNKWPGKRAFGIYRFLPIFFLLGASLEFSMINWKVGEVNF 213
           +++ + + PGK+ FGIYRFLP FF+LG ++E+ MI  +VG+  F
Sbjct: 7   VRRALQRVPGKQRFGIYRFLPFFFVLGGAMEWIMIKVRVGQETF 50


>UniRef50_Q69YU5 Cluster: Putative uncharacterized protein
           DKFZp547P055; n=14; Euteleostomi|Rep: Putative
           uncharacterized protein DKFZp547P055 - Homo sapiens
           (Human)
          Length = 71

 Score = 42.3 bits (95), Expect = 0.008
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 287 MPAGVTWGQYISFSIAAMLSMLAGSQVVHLYYKP 388
           MPAGV    Y+    A++L+M AG++VVH YY+P
Sbjct: 1   MPAGVPMSTYLKMFAASLLAMCAGAEVVHRYYRP 34


>UniRef50_A3EV58 Cluster: 4-amino-4-deoxy-L-arabinose transferase;
           n=1; Leptospirillum sp. Group II UBA|Rep:
           4-amino-4-deoxy-L-arabinose transferase - Leptospirillum
           sp. Group II UBA
          Length = 546

 Score = 34.3 bits (75), Expect = 2.1
 Identities = 16/32 (50%), Positives = 21/32 (65%)
 Frame = +1

Query: 103 WPGKRAFGIYRFLPIFFLLGASLEFSMINWKV 198
           W G+  FG+  F P+ FLL ASL  S+I WK+
Sbjct: 78  WWGQNEFGVRFFAPVLFLL-ASLILSLIAWKL 108


>UniRef50_Q59JR8 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 411

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = +2

Query: 296 GVTWGQYISFSIAAMLSMLAGSQVVHLYYKPLQDLNEYINRELKNLPDNIQVQIKDD 466
           G  W + I  +I  ++ M+    +V+     L+ LNE+I  +LKNLP++   ++ DD
Sbjct: 332 GSDWSKQIGITIQNIMKMIIMKMMVNNEMNKLK-LNEFIQLKLKNLPNHGLKELVDD 387


>UniRef50_Q245R4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 166

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
 Frame = +1

Query: 97  NKWPGKRAFGIYRFLP---IFFLLGASLEFSMINWKVGEV-NFYNTFKKRQARDLIEEKI 264
           N W  KR F  ++F+    +F++   + +  ++N KV ++ NFYN   K+Q  D    K 
Sbjct: 68  NMWVYKRLFTSFQFVKNEQLFYIEDNNKDRLILNAKVSKLKNFYNQIGKKQCMDKSGLKF 127

Query: 265 KK 270
           KK
Sbjct: 128 KK 129


>UniRef50_A2EKW4 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 422

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 24/77 (31%), Positives = 38/77 (49%)
 Frame = -1

Query: 392 VMACSIDELLEILQALIAWPLLKKICIVPKLLQLAFYETEYFLIFSSIKSRAWRFLNVL* 213
           V +CSID +  +++A+ A  L  K+C   KLL    Y  E   +  ++ S   R L +  
Sbjct: 52  VKSCSIDPINIVIRAIAALHLASKVCEEAKLLSRIVYALEDCKLKENLISYFNR-LGIYQ 110

Query: 212 KFTSPTFQFIIENSKLA 162
           +      Q +IE SK+A
Sbjct: 111 QILDMDPQVLIEYSKIA 127


>UniRef50_Q687H5 Cluster: DegP-like serine protease 1 precursor;
           n=2; Plasmodium falciparum|Rep: DegP-like serine
           protease 1 precursor - Plasmodium falciparum
          Length = 870

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 18/69 (26%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
 Frame = +1

Query: 52  IKIVLMRISWIQKLVNK--WPGKRAFGIYRFLPIFFLLGASLEFSMINWKVGEVNFYNTF 225
           IK V++++  ++ L+N+  W  +  + IY  + +F +L  SL     N ++ ++  YN F
Sbjct: 684 IKSVMVKLYKVKYLLNQHNWDKRNKYFIYGGI-VFSILTRSLYVYTQNPEINKLMLYNNF 742

Query: 226 KKRQARDLI 252
           KK+   +++
Sbjct: 743 KKKSKDEIV 751


>UniRef50_A0C1Y0 Cluster: Chromosome undetermined scaffold_143,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_143,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 241

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 115 RAFGIYRFLPIFFLLGASLEFSMINWKVGEVNF-YNTFKKRQARDLIE 255
           +  G Y  +P++ +LG SL F++I   V  +NF    F++   R L+E
Sbjct: 105 KTMGYYTKIPLYVVLGVSLNFTLIFGFVDTINFVIGFFQQAWQRTLVE 152


>UniRef50_Q0UVU4 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 237

 Score = 32.3 bits (70), Expect = 8.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 222 CIIKIHFTDFPVYHRKFQTSTK*EKNREKPINPKS 118
           C+   H T  P+  R+FQT++     RE+P N  S
Sbjct: 32  CVFCAHHTQPPLTQRRFQTNSSDSNKREEPFNSSS 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,308,068
Number of Sequences: 1657284
Number of extensions: 9420061
Number of successful extensions: 23032
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 22398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23029
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)