Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11f01f
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    27   0.59 
AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.     25   1.8  
EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic anhy...    23   9.5  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 26.6 bits (56), Expect = 0.59
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 73  FSLGLFLYNFLTFSGYNACRHRLY 2
           FSL +   N + +S YN  RH +Y
Sbjct: 336 FSLSICFGNIIMYSSYNKFRHNVY 359


>AY462096-1|AAS21248.1|  603|Anopheles gambiae transposase protein.
          Length = 603

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 295 WSNLGTIHIFFNSGHAINA-CRISS 366
           W+NL  I  F  +GH I+  C++SS
Sbjct: 183 WTNLNQISFFALTGHYIDENCKLSS 207


>EF065522-1|ABK59322.1|  255|Anopheles gambiae beta carbonic
           anhydrase protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/60 (20%), Positives = 29/60 (48%)
 Frame = +1

Query: 193 KVGEVNFYNTFKKRQARDLIEEKIKKYSVS*NASWSNLGTIHIFFNSGHAINACRISSSS 372
           K+ +VN     +   +   ++ +++ + +  +A W ++ T  I+F S ++     I  SS
Sbjct: 183 KLSQVNTLQQIENVASYGFLKRRLESHDLHIHALWFDIYTGDIYFFSRNSKRFIAIDESS 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 518,639
Number of Sequences: 2352
Number of extensions: 10787
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)