Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e24f
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    56   2e-08
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    56   2e-08
U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    55   4e-08
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    55   4e-08
U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    48   4e-06
U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein ...    48   4e-06
U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein ...    48   4e-06
AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or cys...    48   4e-06
AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or cys...    48   4e-06
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    48   4e-06
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    46   1e-05
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    46   1e-05
U50301-8|AAB37049.1|  339|Caenorhabditis elegans Serpin protein ...    36   0.021
AY525086-1|AAS13534.1|  199|Caenorhabditis elegans serine or cys...    36   0.021
Z69716-3|CAA93529.1|  335|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 55.6 bits (128), Expect = 2e-08
 Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
 Frame = +1

Query: 163 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQ 342
           LK    L    +V+ SPL + L L+L  +GA   +++E+ ++LGG    E    +  L +
Sbjct: 13  LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69

Query: 343 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWA 516
              + D    T + N+++V+  Y +   +  T   L+++  ++++F   + AA  +N + 
Sbjct: 70  AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129

Query: 517 DEQTQGHIKTPVSED 561
           +  T G IK  +  D
Sbjct: 130 ENHTNGKIKDLIPAD 144


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 55.6 bits (128), Expect = 2e-08
 Identities = 34/135 (25%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
 Frame = +1

Query: 163 LKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQ 342
           LK    L    +V+ SPL + L L+L  +GA   +++E+ ++LGG    E    +  L +
Sbjct: 13  LKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLGGSRIFEE---FSGLME 69

Query: 343 RYAEFDPKFLT-VANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWA 516
              + D    T + N+++V+  Y +   +  T   L+++  ++++F   + AA  +N + 
Sbjct: 70  AVGDTDNGVETKIVNRVFVNQAYTIHQDYLETVEKLYKASGESLDFSQTEQAAKTMNTFV 129

Query: 517 DEQTQGHIKTPVSED 561
           +  T G IK  +  D
Sbjct: 130 ENHTNGKIKDLIPAD 144


>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
 Frame = +1

Query: 154 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQES--SHTY 327
           L +L++  NL +  + + SPL + L LSL    A  ++++EIR+ L  G   E    H  
Sbjct: 22  LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78

Query: 328 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADII 504
            +            + VAN I+    + +   + +    L+ +    +NF D + +A+ I
Sbjct: 79  NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138

Query: 505 NRWADEQTQGHIKTPVSEDKLT 570
           N +  E T+GHIK  ++ D ++
Sbjct: 139 NNFVSENTKGHIKKIINPDSIS 160


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 54.8 bits (126), Expect = 4e-08
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
 Frame = +1

Query: 154 LKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQES--SHTY 327
           L +L++  NL +  + + SPL + L LSL    A  ++++EIR+ L  G   E    H  
Sbjct: 22  LSLLRQQ-NLTE--SFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFS 78

Query: 328 GLLNQRYAEFDPKFLTVANKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADII 504
            +            + VAN I+    + +   + +    L+ +    +NF D + +A+ I
Sbjct: 79  NISAGLLVAEKGTEVNVANHIFSRKTFTIKKLYLNDVKKLYNAGASQLNFEDQEASAEAI 138

Query: 505 NRWADEQTQGHIKTPVSEDKLT 570
           N +  E T+GHIK  ++ D ++
Sbjct: 139 NNFVSENTKGHIKKIINPDSIS 160


>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +1

Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
           SPL + L LSL    A  +++++IRE L  G  + Q   H   +     A      + +A
Sbjct: 28  SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87

Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
           N ++    +K+  ++      L+ +   +++F + +  A+ IN +  E T  HIK  +  
Sbjct: 88  NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147

Query: 559 DKL 567
           D +
Sbjct: 148 DSI 150


>U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform b protein.
          Length = 366

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +1

Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
           SPL + L LSL    A  +++++IRE L  G  + Q   H   +     A      + +A
Sbjct: 28  SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87

Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
           N ++    +K+  ++      L+ +   +++F + +  A+ IN +  E T  HIK  +  
Sbjct: 88  NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147

Query: 559 DKL 567
           D +
Sbjct: 148 DSI 150


>U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein 7,
           isoform c protein.
          Length = 365

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +1

Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
           SPL + L LSL    A  +++++IRE L  G  + Q   H   +     A      + +A
Sbjct: 28  SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87

Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
           N ++    +K+  ++      L+ +   +++F + +  A+ IN +  E T  HIK  +  
Sbjct: 88  NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147

Query: 559 DKL 567
           D +
Sbjct: 148 DSI 150


>AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 365

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +1

Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
           SPL + L LSL    A  +++++IRE L  G  + Q   H   +     A      + +A
Sbjct: 28  SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87

Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
           N ++    +K+  ++      L+ +   +++F + +  A+ IN +  E T  HIK  +  
Sbjct: 88  NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147

Query: 559 DKL 567
           D +
Sbjct: 148 DSI 150


>AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +1

Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
           SPL + L LSL    A  +++++IRE L  G  + Q   H   +     A      + +A
Sbjct: 28  SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87

Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
           N ++    +K+  ++      L+ +   +++F + +  A+ IN +  E T  HIK  +  
Sbjct: 88  NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147

Query: 559 DKL 567
           D +
Sbjct: 148 DSI 150


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +1

Query: 208 SPLGVMLLLSLYESGAGAQSKEEIREIL--GGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
           SPL + L LSL    A  +++++IRE L  G  + Q   H   +     A      + +A
Sbjct: 28  SPLSIALALSLVHVAAKGETRDQIREALVKGSTDEQLEQHFANISAALLAAERGTEVKLA 87

Query: 382 NKIYVSDQYKLADAF-SRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKTPVSE 558
           N ++    +K+  ++      L+ +   +++F + +  A+ IN +  E T  HIK  +  
Sbjct: 88  NHVFTRAGFKIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGS 147

Query: 559 DKL 567
           D +
Sbjct: 148 DSI 150


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
 Frame = +1

Query: 190 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEFDPKF 369
           +++++ SPL + L+LSL  +G    S+++IR  L  G   E    +     +  +   K 
Sbjct: 21  NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80

Query: 370 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWADEQTQGHI 540
           + V  ANK+Y+   + +   F  TA   + ++  +++   P  A   IN + +  T G I
Sbjct: 81  VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKI 139

Query: 541 KTPVSEDKL 567
           K   ++D +
Sbjct: 140 KNIATQDSI 148


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 3/129 (2%)
 Frame = +1

Query: 190 DKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESSHTYGLLNQRYAEFDPKF 369
           +++++ SPL + L+LSL  +G    S+++IR  L  G   E    +     +  +   K 
Sbjct: 21  NESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHFSFVSKEVKNGTKG 80

Query: 370 LTV--ANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFGDPKNAADIINRWADEQTQGHI 540
           + V  ANK+Y+   + +   F  TA   + ++  +++   P  A   IN + +  T G I
Sbjct: 81  VEVYLANKVYLKKGFTVNPTFLSTALKNYGADAKSLDLTTPA-AVQEINSFVNTATNGKI 139

Query: 541 KTPVSEDKL 567
           K   ++D +
Sbjct: 140 KNIATQDSI 148


>U50301-8|AAB37049.1|  339|Caenorhabditis elegans Serpin protein 8
           protein.
          Length = 339

 Score = 35.9 bits (79), Expect = 0.021
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
 Frame = +1

Query: 163 LKESYNLADDKNVIASPLGVMLLL-SLYESGAGAQSKEEIREIL--GGGEAQESSHTYGL 333
           LK  +     ++ + SP+ + L L SLYE+  G +++ +I + L     + +  +H   +
Sbjct: 14  LKLLHQQDHSQSFVFSPIAISLALYSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNV 72

Query: 334 LNQRYA-EFDPKFLTVANKIYVSDQYKLAD-AFSRTANLFRSEVDNINFGDPKNAADIIN 507
                A + DP+ + + N I   +  K       +   L+  EV + +  + K     IN
Sbjct: 73  STALSAMKKDPQ-VKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTIN 131

Query: 508 RWADEQTQGHIK---TPVSEDK 564
           +   E T GHIK   T +S DK
Sbjct: 132 KLIRENTDGHIKKINTKISIDK 153


>AY525086-1|AAS13534.1|  199|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 199

 Score = 35.9 bits (79), Expect = 0.021
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
 Frame = +1

Query: 163 LKESYNLADDKNVIASPLGVMLLL-SLYESGAGAQSKEEIREIL--GGGEAQESSHTYGL 333
           LK  +     ++ + SP+ + L L SLYE+  G +++ +I + L     + +  +H   +
Sbjct: 13  LKLLHQQDHSQSFVFSPIAISLALYSLYEAARG-ETRSQIHDCLFKNATDGEMVTHFSNV 71

Query: 334 LNQRYA-EFDPKFLTVANKIYVSDQYKLAD-AFSRTANLFRSEVDNINFGDPKNAADIIN 507
                A + DP+ + + N I   +  K       +   L+  EV + +  + K     IN
Sbjct: 72  STALSAMKKDPQ-VKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDNEKETIKTIN 130

Query: 508 RWADEQTQGHIK---TPVSEDK 564
           +   E T GHIK   T +S DK
Sbjct: 131 KLIRENTDGHIKKINTKISIDK 152


>Z69716-3|CAA93529.1|  335|Caenorhabditis elegans Hypothetical
           protein C04B4.3 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 9/175 (5%)
 Frame = +1

Query: 49  RLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPLGVML 228
           +LLL V +  G +   +  H    +     I        KES +L  D    +S +G  +
Sbjct: 137 QLLLSVLVYTGARHIDIIAHSMGVSIARAIIQGGKFTSEKESCDLGSD---FSSLIGTFI 193

Query: 229 LLSLYESG-----AG----AQSKEEIREILGGGEAQESSHTYGLLNQRYAEFDPKFLTVA 381
            +S    G     AG    A  KE IR+I       ES  ++  L  +Y+    KFLT  
Sbjct: 194 AISSANYGMCSCEAGTAFPACDKEVIRKINPLENQLESKKSF--LQTKYS----KFLTKL 247

Query: 382 NKIYVSDQYKLADAFSRTANLFRSEVDNINFGDPKNAADIINRWADEQTQGHIKT 546
           NK++  +   +A  +S+   +F     N+ +G   +     N W +     H++T
Sbjct: 248 NKVHKKEAEFIASIWSKDDEVFLK--GNLVWGKQTSLVPGSNIWKEYPQLTHMET 300


>AF000198-2|AAB53055.2|  748|Caenorhabditis elegans Hypothetical
           protein T28F2.4a protein.
          Length = 748

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 18/60 (30%), Positives = 29/60 (48%)
 Frame = +1

Query: 37  TVMDRLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNLADDKNVIASPL 216
           T  D+      LV   +    FG+ FS  RLG+ ++K  L+    + N+A  KN + + L
Sbjct: 319 TFFDKFYQSNVLVVRRKQPTYFGNLFSTARLGELLEKNHLE-YGRNINIAQYKNGVRTTL 377


>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical
           protein ZK512.5 protein.
          Length = 1232

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
 Frame = +1

Query: 244 ESGAGAQSKEEIREILGGG---EAQESSHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKL 414
           ESG+  ++KE   + L GG   EA ES+ T GL    YA+     +T+  +++ +D  K+
Sbjct: 521 ESGSKFEAKERFNKYLLGGHINEAVESAITDGL----YAD----AMTLIRRLHPNDAKKI 572

Query: 415 ADAFSRTANL 444
            +  +R  NL
Sbjct: 573 EEIEARFMNL 582


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.134    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,869,597
Number of Sequences: 27780
Number of extensions: 293416
Number of successful extensions: 758
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 756
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)