Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e23f
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.9  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    21   9.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.9  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 379 NVLERGLFC 353
           N +ERGLFC
Sbjct: 128 NCIERGLFC 136


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -1

Query: 310 LRSPTKTTCLPLNFFSSSRTSLIWIF*KAFSLG 212
           L +PT T      F+ + + +++W+      LG
Sbjct: 31  LTTPTPTDINSFYFYKTEQFTVLWVLFTMIVLG 63


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 520 LCSIVVCWFLSKC 482
           L  ++ CW +SKC
Sbjct: 218 LYRLLRCWLISKC 230


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 374 DIDLCVQCYPRGL 412
           D+DL  Q +PRGL
Sbjct: 46  DLDLNAQNHPRGL 58


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 520 LCSIVVCWFLSKC 482
           L  ++ CW +SKC
Sbjct: 218 LYRLLRCWLISKC 230


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 107 RNQLRPQSPTSGA 145
           R Q++PQSP+S +
Sbjct: 19  RMQIKPQSPSSSS 31


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 107 RNQLRPQSPTSGA 145
           R Q++PQSP+S +
Sbjct: 19  RMQIKPQSPSSSS 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,769
Number of Sequences: 336
Number of extensions: 2412
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)