Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e22r
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    24   1.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   1.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.8  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 224 IRYCLQRDRFICH*VRCFINVHYSFSASCSNQSS 325
           IRY      F+     CF  ++Y +S+ C N S+
Sbjct: 144 IRYSAFGMIFVALLEHCFSMLNYVYSSKCENNST 177


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/55 (27%), Positives = 31/55 (56%)
 Frame = +1

Query: 472 LILYWCYFLTPLLVLEMLYLSSILHQNNLMLLSIFHLVTIEKYVASLRFVATAQV 636
           L + + +F+ PL++L +LY   I+ +N   L+S    + + K++ ++   A  QV
Sbjct: 239 LTIIFLFFIIPLIILLILY--CIIAKN---LMSNAATLVLNKHIDNISLRARKQV 288


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +2

Query: 476 FYIGAIF*HPY*FLRCCIYQVYFIKTI*CC 565
           FY   I    +  L  CIY  Y++  + CC
Sbjct: 241 FYYAFILFTVHLLLLVCIYYFYYMHLLFCC 270


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 374 EFFQRFKCT*TPNCNYSLV 430
           +FFQ+F+C   P   + L+
Sbjct: 80  DFFQQFECDNEPKLRHYLI 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,934
Number of Sequences: 336
Number of extensions: 3923
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)