Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e22r
(735 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58885| Best HMM Match : WD40 (HMM E-Value=0.00016) 82 4e-16
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 33 0.18
SB_8050| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_41991| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_764| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_58895| Best HMM Match : SRCR (HMM E-Value=0) 30 1.7
SB_34680| Best HMM Match : WD40 (HMM E-Value=4.5e-07) 30 1.7
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_34105| Best HMM Match : Extensin_2 (HMM E-Value=4.8) 30 1.7
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 29 3.0
SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10) 29 3.0
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 3.9
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_31407| Best HMM Match : TolA (HMM E-Value=2.5) 29 5.2
SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42) 28 6.8
SB_37980| Best HMM Match : 7tm_2 (HMM E-Value=5.3e-13) 28 9.0
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 28 9.0
SB_32285| Best HMM Match : Metallophos (HMM E-Value=2.4e-07) 28 9.0
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 28 9.0
>SB_58885| Best HMM Match : WD40 (HMM E-Value=0.00016)
Length = 446
Score = 82.2 bits (194), Expect = 4e-16
Identities = 43/145 (29%), Positives = 81/145 (55%), Gaps = 4/145 (2%)
Frame = -3
Query: 727 AHFTPDGKSAFIASKSNHSYCIYDLVKAEAKLVQLPQISKRPHI----FQLSPNGKYLAT 560
AHFT DG+ ++S+ + Y +YD++K + + ++P I R F++SP+GK+L
Sbjct: 234 AHFTCDGEQVIMSSRRKYFY-VYDMIKGQ--VTRIPGIRGRHERNLEKFKVSPDGKHLVF 290
Query: 559 SDCFDEVYLIDTASQELIRVLKNSTNIKSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLK 380
+ L+ + +++ + LK + ++K F+++ S +Y G G V VW + T +
Sbjct: 291 LGDNGYMILLSSKTKQWVGNLKMNGSVKDVTFSADGSRMYSTGSDGEVYVWDMTTRSCVH 350
Query: 379 KFYDNGCVTASCITTSACGRLIATG 305
KF D+GC+T + + S G+ +A G
Sbjct: 351 KFVDDGCLTGTALAASKDGKYLACG 375
Score = 49.6 bits (113), Expect = 3e-06
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 20/256 (7%)
Frame = -3
Query: 721 FTPDGKSAFIASKSNHSYCIYDLVKAEAKLVQLPQISKRP-HIFQLSPNGKYLATSDCFD 545
F P K + + N + I+ + E +Q +++ P H + +G+ + S
Sbjct: 192 FHPSAK-VLLTAGLNKTLDIFQVDGKENPKLQSVFVNRFPIHNAHFTCDGEQVIMSSRRK 250
Query: 544 EVYLIDTASQELIRVL----KNSTNIKSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKK 377
Y+ D ++ R+ ++ N++ + + L GD G + + S T + +
Sbjct: 251 YFYVYDMIKGQVTRIPGIRGRHERNLEKFKVSPDGKHLVFLGDNGYMILLSSKTKQWVGN 310
Query: 376 FYDNGCVTASCITTSACG-RLIATGSGEGIVNIYKTSDLMTNEPIPLKTVSNITTKITSL 200
NG V +T SA G R+ +TGS +G V ++ MT K V + T+L
Sbjct: 311 LKMNGSVKD--VTFSADGSRMYSTGS-DGEVYVWD----MTTRSCVHKFVDDGCLTGTAL 363
Query: 199 KFNSTTEILAACSAYYPNA--------------VKLIHIPSYHVYQNFPKQSFNYNHIQV 62
+ + LA Y P A V+ +H+PS V+ N+P ++
Sbjct: 364 AASKDGKYLACGYIYLPTANGTLTFTQGQVEEFVRGVHLPSMTVFSNWPNSKVPLRYVNA 423
Query: 61 VNFSPNSGYMAFSNNQ 14
+FSPNSG+++ N++
Sbjct: 424 FDFSPNSGFLSIGNDR 439
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 39.9 bits (89), Expect = 0.002
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Frame = -3
Query: 718 TPDGKSAFIASKSNHSYCIYDLVKAEAKLVQLPQISKRPHIFQLSPNGKYLATSDCFDEV 539
T DG+ AS+ + + I++L + A + L S+ + SP+ K+ + V
Sbjct: 841 TSDGRRLVSASQ-DRTLRIWNL-ETFAHVSTLRGHSETVYCVCCSPDDKFAISGSEDTMV 898
Query: 538 YLIDTASQELIRVLKNSTN-IKSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKFYDNG 362
+ D S + +R L T+ I + A + S++ GD V VWSL + + L + +
Sbjct: 899 KIWDLESAKEVRSLVGHTSDIFAVAVTPDGSKVISSGDDTQVKVWSLESGEELASLHGHS 958
Query: 361 CVTASCITTSACGRLIATGSGEGIVNIYKTSDLMTNEPI 245
+ +T S G I +GS + I++ + + T P+
Sbjct: 959 -ESVRIVTVSPDGLTIVSGSEDATFKIWRIASMNTISPV 996
Score = 31.5 bits (68), Expect = 0.73
Identities = 34/156 (21%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Frame = -3
Query: 721 FTPDGKSAFIASKSNHSYCIYDLVKAEAKLVQLP-QISKRPHIFQLSPNGKYLATSDCFD 545
++PDG S + AS N +D+ + Q + S + + N + +AT FD
Sbjct: 1460 WSPDGLSLYSASTDN-KIAHWDVTEPSYSQRQNEIKASSFGISYLYADNERLIAT---FD 1515
Query: 544 EVYLI--DTASQELIRVLKNSTN-IKSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKF 374
+ ++I D S+E+IR +F ++ G + W L + + +
Sbjct: 1516 DAHVITWDIKSREVIRSANGHWGRYNVVSFFPQGDQVVSNGHHFTLKQWDLGSGRIKHIY 1575
Query: 373 YDNGCVTASCITTSACGRLIATGSGEGIVNIYKTSD 266
+ +T C+ CGR + TGS + I+ +++ +
Sbjct: 1576 PHSNEITTLCVLP--CGRYLVTGSRDKILRLWEAGN 1609
>SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = -3
Query: 472 AAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGSGEG 293
AAFNS S L G +T W + + KS+KK Y + T SC+ + IA+GS +G
Sbjct: 46 AAFNSTSRYLLLGGKTKTLTAWDVRS-KSVKKTYKDHKDTVSCLQFNWNDTSIASGSVDG 104
Query: 292 IVNIYKTSDLMTNEPI 245
+ ++ ++P+
Sbjct: 105 NILLHNVVTAQVSQPL 120
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 35.5 bits (78), Expect = 0.045
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 9/118 (7%)
Frame = -3
Query: 604 PHIFQLSPNGKYLATS--DCFDEVYLIDTAS-------QELIRVLKNSTNIKSAAFNSNS 452
P SP+G+YL T D F EV+ T Q + + F+ +S
Sbjct: 217 PECAAFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQENFMMMDETVLCLTFSRDS 276
Query: 451 SELYCFGDQGIVTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIY 278
L G G + VW L T + L++F +C+T S + +GS + + ++
Sbjct: 277 EMLASGGQDGKIKVWKLQTGQCLRRFERAHSKGVTCVTFSRDASQLLSGSFDMTIRMH 334
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 33.5 bits (73), Expect = 0.18
Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Frame = -3
Query: 565 ATSDCFDEVYLIDTASQELIRVL-KNSTNIKSAAFNSNSSELYCFG-DQGIVTVWSLCTF 392
A++DCF +V+ D ++ EL+ L ++ ++S +F+ ++ + C G D GIV +W +
Sbjct: 945 ASADCFAKVW--DASTGELLLSLGRHPDVVRSISFSPDN--MICTGCDDGIVRIWDSVSG 1000
Query: 391 KSLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIYKTSDLM 260
K + N A C T GR I + S + + SD++
Sbjct: 1001 KEVTSCKKNETWIADCHFTRD-GRNIVSVSDN--IQVSSCSDIL 1041
>SB_8050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 32.3 bits (70), Expect = 0.42
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -3
Query: 625 LPQISKRPHIFQLSPNGKYLATSDCFDEVYLIDTASQELIRVLK 494
LP +R L+PNGK T+D F V L+D IR+ K
Sbjct: 37 LPDFPRRGTNITLAPNGKVAVTTDEFGRVMLLDVKKGIAIRMWK 80
>SB_762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 202
Score = 31.9 bits (69), Expect = 0.55
Identities = 31/105 (29%), Positives = 47/105 (44%)
Frame = -3
Query: 475 SAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGSGE 296
+ F+ +S L G V + +L K G T S + S G IA G+ +
Sbjct: 69 TVTFSPDSKILATGSHSGKVNLINLELGKKESSLDTRGKFTMS-LAYSPDGHYIACGAID 127
Query: 295 GIVNIYKTSDLMTNEPIPLKTVSNITTKITSLKFNSTTEILAACS 161
GI+NI+ DL TN+ L T+ I SL F+ +++L S
Sbjct: 128 GIINIF---DLTTNK--LLHTLEGHAMPIRSLTFSPDSQLLITAS 167
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -3
Query: 418 VTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNI 281
V +W L + K LK D V +T S +++ATGS G VN+
Sbjct: 46 VRIWDLVSGKQLKTI-DCDPVDTWTVTFSPDSKILATGSHSGKVNL 90
>SB_41991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = -3
Query: 469 AFNSNSSELYCFGDQGIVTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGSGEGI 290
A N S+ L G QG V W++ L + + SC+ T + + + T G
Sbjct: 289 ASNKESATLVASGPQGYVHFWNVYNGGQLYAAFRASQYSVSCMATDSDNKRLVTTDSAGF 348
Query: 289 VNIYKTSD 266
+ ++ D
Sbjct: 349 LYVWDVED 356
>SB_764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -3
Query: 502 VLKNSTNIKSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKFYDNGCVTASCITT 335
+L T++ + + SE F D G+ T C+ + + + C+T C++T
Sbjct: 164 ILDRLTSLSDSVLELDVSECASFSDNGLQTALQKCSALQILRTVRSPCMTDKCLST 219
>SB_58895| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1838
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -3
Query: 355 TASCITTSACGRLIATG---SGEGIVNIYKTSDLMTNEPIPLKTVSNITT 215
T S +T A R+I T +GE + N T + MTN+P+ KT++N T
Sbjct: 103 TKSTVTAPAT-RIIMTNQPMTGEAMTNQPMTGEAMTNQPMTEKTMTNQPT 151
>SB_34680| Best HMM Match : WD40 (HMM E-Value=4.5e-07)
Length = 454
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Frame = -3
Query: 613 SKRPHIFQLSPNGKYLATSDCFDEVYLIDTASQELIRVL-------KNSTNIKSAAFN-- 461
S R + Q S +GKYLA + L+D S + VL N I+SA +
Sbjct: 331 SARLYSCQYSKDGKYLAAGTSEANIILLDPDSLSTLLVLDCKAVSAPNEGMIQSAIIHCI 390
Query: 460 --SNSSELYCFG-DQGIVTVWSL 401
SNS + G + G+V +WSL
Sbjct: 391 AFSNSCQYLAAGYNDGVVRIWSL 413
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = -3
Query: 367 NGCVTASCITTSACGRLIATGSGEGIVNIYKTSDLMTNEPIPLKTVSNITTKITSLKFNS 188
N + + ITT+ +I T I+ T+ + T T + ITT IT+ +
Sbjct: 1072 NTTINTTIITTTITTTIITTTITTTIITTTITTTITTTIITTTVTTTIITTTITTTIITT 1131
Query: 187 TTEILAACS 161
T IL +CS
Sbjct: 1132 TDPILFSCS 1140
>SB_34105| Best HMM Match : Extensin_2 (HMM E-Value=4.8)
Length = 623
Score = 30.3 bits (65), Expect = 1.7
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Frame = +1
Query: 442 IIHCCYC*KL---LILYWCYFLTPLLVLEMLYLSSILHQ---NNLMLLSIFHLVTIEKYV 603
++H YC + ++LY YF + + +L +LHQ N SI V + +Y
Sbjct: 296 LLHQYYCTSITAPVLLYQYYFTS--ITAPVLLQPVLLHQYYCNQYYCTSITAPVLLHQYY 353
Query: 604 ASLRFVATAQV*LQPSLNHKYSKNGYF 684
+ TA V LQP L H+Y N Y+
Sbjct: 354 CTS---ITAPVLLQPVLLHQYYCNQYY 377
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +1
Query: 469 LLILYWCYFLTPLLVLEMLYLSSI-----LHQNNLMLLSIFHLVTIEKYVASLRFVA-TA 630
LL Y+C +T ++L Y +SI LH +L + ++ + Y S+ + TA
Sbjct: 391 LLYQYYCTSITVPVLLHQYYCTSITVPVLLHHITAPVL-LQPVLLYQYYCTSIIATSITA 449
Query: 631 QV*LQPSLNHKYSKNGYF 684
V LQP L H+Y N Y+
Sbjct: 450 PVLLQPVLLHQYYCNQYY 467
>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
Length = 685
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -3
Query: 325 GRLIATGSGEGIVNIY---KTSDLMTNEPIPLKTVSNITTKITSLKFNSTTE 179
G+L+A+G + +VNI+ T EP P++ + ++T ++K N+ +
Sbjct: 483 GKLLASGGNDNVVNIWPYPSTVGSSAGEPSPVEPLFSLTHHQAAVKVNNNKD 534
>SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10)
Length = 283
Score = 29.5 bits (63), Expect = 3.0
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -3
Query: 322 RLIATGSGEGIVNIYKTSDLMTNE 251
+L+ATG EG++ I++ SD +T +
Sbjct: 243 QLVATGDSEGVIKIWRLSDELTTQ 266
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -3
Query: 535 LIDTASQELIRVLKNSTNIKSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKFYD--NG 362
L+DT+ L + +K +S + + + + CF I+ V S CTF+ + F +G
Sbjct: 229 LVDTSWVNLKKKVKCR---RSNPYQNENDGVCCFEHAHIIKVTSPCTFQRFQTFKSGVDG 285
Query: 361 CVTASCITTSACG 323
+ A+ + + CG
Sbjct: 286 WIQANTLRKTKCG 298
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = -3
Query: 721 FTPDGKSAFIASKSNHSYCIYDLVKAEAKLVQLPQISKRPHIFQLSPNGKYLATSDCFDE 542
F+ D + F S+ + + ++D K A L QL + ++SP+G +A+S D+
Sbjct: 1189 FSIDDRKIFSGSE-DCTIRVWDS-KTGALLAQLDGHAGAVTCVRVSPDGGVIASSSA-DK 1245
Query: 541 VYLIDTASQELIRVLK-NSTNIKSAAFNSNSSELYCFGDQGIVTVWSL 401
+ S E +R L+ + + S AF+ N L + VW +
Sbjct: 1246 TIRLWNPSDEFLRSLEGHEDRVTSLAFSKNGKRLVSVALDKKLKVWDV 1293
>SB_31407| Best HMM Match : TolA (HMM E-Value=2.5)
Length = 315
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 595 FQLSPNGKYLATSDCFDEVYLIDTAS-QELIRVLKNSTNIKSAAFNSNS 452
F L+P GK D Y++D + + LIR+ +S ++S SNS
Sbjct: 191 FALTPEGKSFIQPDHLRAYYIMDALTFKILIRIKNSSHTVRSVHSRSNS 239
>SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1287
Score = 28.3 bits (60), Expect = 6.8
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Frame = -3
Query: 364 GCVTASCITTSACGRLIATGSGEGIVNIYKTSDLMTNEPIPLKTVSNITTKITSLKF--- 194
GC+ A T R + GS E + I+K ++ P P+ + N + K TSL
Sbjct: 153 GCIMAELYTL----RPLFPGSSE-VDEIFKVCSVL-GPPKPVMSNYNSSLKATSLHSLIP 206
Query: 193 NSTTEILAACSAYY-------PNAVKLIHIPSYHVYQNFPK 92
N++ E + P A + +H P + V QN PK
Sbjct: 207 NASAEAIQLMQEMLFWNPKKRPTAAQALHFPYFKVGQNLPK 247
>SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42)
Length = 383
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 5/111 (4%)
Frame = -3
Query: 592 QLSPNGKYLATSDCFDEVYLIDTASQELIRVL-KNSTNIKSAAF----NSNSSELYCFGD 428
++ P+GK LAT V L + + EL+R L + + + AF + + L +
Sbjct: 58 EVGPDGKTLATCSADCTVGLWNITTGELLRTLVGHEKPVTNCAFMWGPSLKTPILATASE 117
Query: 427 QGIVTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIYK 275
G V +W + K + + C+ GR +AT S +G + Y+
Sbjct: 118 DGDVILWHYDSGKRAARLAVHCKAVTDCVFAKD-GRALATSSLDGTICHYR 167
>SB_37980| Best HMM Match : 7tm_2 (HMM E-Value=5.3e-13)
Length = 1297
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = -3
Query: 175 LAACSAYYPNAVKLIHIPSYHVYQNFPKQSFNYNHIQVVN 56
LA CS + + + +H+P+ +Y N K++++ + N
Sbjct: 677 LANCSGVFISRQEFMHLPNQSIYVNVSKKTYDLQEYFIEN 716
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/109 (20%), Positives = 46/109 (42%)
Frame = -3
Query: 481 IKSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGS 302
+++ FNS+ + G I+ +W+ LK + +G + R IA+ S
Sbjct: 574 VRAVRFNSDGNYCLTCGSDKILALWNPHKATRLKTYSGHGYEVLDAVAAGDSSR-IASCS 632
Query: 301 GEGIVNIYKTSDLMTNEPIPLKTVSNITTKITSLKFNSTTEILAACSAY 155
+ V ++ D+ T + I + T+++ +KFN + +Y
Sbjct: 633 ADRTVVLW---DVSTGQVI--RRYRGHTSRVNCVKFNQPDSTVIISGSY 676
>SB_32285| Best HMM Match : Metallophos (HMM E-Value=2.4e-07)
Length = 562
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 574 KYLATSDCFDEVYLIDTASQE--LIRVLKNSTNIKSAAFNSNSSELYCFGDQGIVTVW 407
K+L SD + + ++ S+E L R L N T SA FN+ + C ++T W
Sbjct: 122 KFLVASDLHYDTFYDESVSEENTLCRKLGNYT---SAKFNATLGRVGCDSPMSLMTSW 176
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = -3
Query: 226 NITTKITSLKFNSTTEILAACSAYYPNAVKLIHIPSYHVYQNFPKQSFNYNHIQVVNFSP 47
N+T K+N T++ L +CS Y + L I V K+ I + F P
Sbjct: 652 NVTASEAGYKYNDTSQRLCSCSPYMIIHLLLYSIKGI-VRSTMTKKQLAITAIIDIRFEP 710
Query: 46 NSGYMAFSN 20
N S+
Sbjct: 711 NDTEFTISD 719
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,593,522
Number of Sequences: 59808
Number of extensions: 428100
Number of successful extensions: 1327
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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