Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e22r
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   2.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   2.4  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       24   4.2  
AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    24   4.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   5.6  
EF519524-1|ABP73587.1|  250|Anopheles gambiae APL2 protein.            23   7.4  
EF519520-1|ABP73583.1|  250|Anopheles gambiae APL2 protein.            23   7.4  
EF519513-1|ABP73576.1|  250|Anopheles gambiae APL2 protein.            23   7.4  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = -3

Query: 256 NEPIPLKTVSNITTKITSLKFNSTTEILAACSAYYPNAVKLIHIPSYHVYQNF 98
           N  + L  ++N   ++  L + +       CS  +P+ V L+ + SYH   +F
Sbjct: 270 NGLVQLNHINNSHGRMLDLLY-ANNAAAKLCSPVFPSVVPLVPLDSYHPALDF 321


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = -3

Query: 211  ITSLKFNSTTEILAACSAYYPNAVKLIHIPSYHVYQNFPKQSFNYNH----IQVVNFSPN 44
            ITS  ++S  E LA    Y  N +  IH P     + F +  ++Y++    I + N + +
Sbjct: 2006 ITSALYSSGNESLAINYEYQKNQIHEIHYPVSVKGKRF-RLRYSYDNRGKLIGISNAATD 2064

Query: 43   SGYMAFSNN 17
              ++A  NN
Sbjct: 2065 EKFIAIDNN 2073


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = -3

Query: 211  ITSLKFNSTTEILAACSAYYPNAVKLIHIPSYHVYQNFPKQSFNYNH----IQVVNFSPN 44
            ITS  ++S  E LA    Y  N +  IH P     + F +  ++Y++    I + N + +
Sbjct: 2007 ITSALYSSGNESLAINYEYQKNQIHEIHYPVSVKGKRF-RLRYSYDNRGKLIGISNAATD 2065

Query: 43   SGYMAFSNN 17
              ++A  NN
Sbjct: 2066 EKFIAIDNN 2074


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
 Frame = -3

Query: 721 FTPDG---KSAFIASKSNHS-YCIYDLVKAEAKLVQLPQISKRPHIFQLSPN 578
           F PDG   +S  + S S    Y  YD  + +AK+V L     +  ++ + PN
Sbjct: 290 FYPDGYGRESKLVPSMSTVGCYPYYDAPELDAKIVGLSYQGNKSALYIIQPN 341


>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 607 RPHIFQLSPNGKYLA 563
           RP++FQ  P+G Y A
Sbjct: 143 RPYLFQCDPSGAYFA 157


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -3

Query: 622 PQISKRPHIFQLSPNGKYLATSDCFDEVYLIDTASQELIRVLKNSTN 482
           PQ  K+  +  L   GK       F  + L+D   + L R+L N  N
Sbjct: 475 PQPWKKQRLVLLPKPGKSPGEPSSFRPICLLDNTGKALERLLLNRLN 521


>EF519524-1|ABP73587.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 148 NAVKLIHIPSYHVYQNFPKQSFNYNHIQVVNFSPN 44
           NA+K  ++  +    +F     +YN + VV   PN
Sbjct: 123 NALKTFNVAQFERRWSFDLIDASYNKLSVVRIPPN 157


>EF519520-1|ABP73583.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 148 NAVKLIHIPSYHVYQNFPKQSFNYNHIQVVNFSPN 44
           NA+K  ++  +    +F     +YN + VV   PN
Sbjct: 123 NALKTFNVAQFERRWSFDLIDASYNKLSVVRIPPN 157


>EF519513-1|ABP73576.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 148 NAVKLIHIPSYHVYQNFPKQSFNYNHIQVVNFSPN 44
           NA+K  ++  +    +F     +YN + VV   PN
Sbjct: 123 NALKTFNVAQFERRWSFDLIDASYNKLSVVRIPPN 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,349
Number of Sequences: 2352
Number of extensions: 14643
Number of successful extensions: 48
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)