Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e22r
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10438-6|AAA19087.1| 429|Caenorhabditis elegans Hypothetical pr... 120 1e-27
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 40 0.002
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 37 0.013
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 37 0.013
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical ... 33 0.28
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.64
U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical pr... 31 0.64
AF016430-11|AAB65375.1| 387|Caenorhabditis elegans Hypothetical... 31 0.64
U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF039716-4|AAB96739.1| 616|Caenorhabditis elegans Aminopeptidas... 30 1.5
Z74038-6|CAA98496.1| 423|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 29 2.6
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 29 2.6
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 29 2.6
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 29 2.6
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 29 2.6
AF106579-9|AAC78202.1| 327|Caenorhabditis elegans Serpentine re... 29 4.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 28 6.0
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical p... 28 7.9
Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical p... 28 7.9
Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical pr... 28 7.9
>U10438-6|AAA19087.1| 429|Caenorhabditis elegans Hypothetical
protein B0280.9 protein.
Length = 429
Score = 120 bits (289), Expect = 1e-27
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 8/240 (3%)
Frame = -3
Query: 712 DGKSAFIASKSNHSYCI-YDLVKAEAKLVQLPQISKRPHI--FQLSPNGKYLATSDCFDE 542
D + I S S Y + Y++ E ++ P + I F +S + ++LA +
Sbjct: 175 DKGHSVICSSSRKEYLMQYNMETREVTQLKPPNTVPKQGIRLFAISHDSQFLAIAGHNSH 234
Query: 541 VYLIDTASQELIRVLKNSTNIKSAAF-NSNSSELYCFGDQGIVTVWSLC---TFKSLKKF 374
+Y++ S E I + N F S+S E++ + G + + ++ T S F
Sbjct: 235 IYVLHATSMEHITTISLPANASEIKFFPSHSREIWIICETGQIVIANIGLPGTKSSQHTF 294
Query: 373 YDNGCVTASCITTSACGRLIATGSGEGIVNIYKTSDLMTN-EPIPLKTVSNITTKITSLK 197
D+G V + + S G ATGS GIVN+Y +D + P PL VSN+ T ++S+
Sbjct: 295 TDDGAVHGTTLAISQHGDYFATGSDTGIVNVYSGNDCRNSTNPRPLFNVSNLVTAVSSIA 354
Query: 196 FNSTTEILAACSAYYPNAVKLIHIPSYHVYQNFPKQSFNYNHIQVVNFSPNSGYMAFSNN 17
FNS +++A CS N ++L+H+ S ++NFP+++ H + V FSPN GYMA N+
Sbjct: 355 FNSDAQLMAICSNVKDNHLRLVHVASQTTFKNFPERNGKVTHARCVEFSPNGGYMAVGND 414
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Frame = -3
Query: 592 QLSPNGKYLATSDCFDEVYLIDTASQ-ELIRVLKNSTN-IKSAAFNSNSSELYCFGDQGI 419
Q S +G +LA++ +++L + + E VLK I FN++SS L G
Sbjct: 43 QFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKT 102
Query: 418 VTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIY 278
V VW + T ++ F + + S ++I + S +G V ++
Sbjct: 103 VRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVH 149
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 37.9 bits (84), Expect = 0.007
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 8/158 (5%)
Frame = -3
Query: 727 AHFTPDGKSAFIASKSNHSYCIYD------LVKAEAKLVQLPQISKRPHIFQLSPNGKYL 566
A F P + S N C YD + E+ + +L Q +R PNG +L
Sbjct: 252 ARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHL 311
Query: 565 ATSDCFDEVY-LID-TASQELIRVLKNSTNIKSAAFNSNSSELYCFGDQGIVTVWSLCTF 392
AT+ CFD + + D T +EL+ +S ++ AF+ + S G VW + T
Sbjct: 312 ATA-CFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTG 370
Query: 391 KSLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIY 278
+ + F D + G + TGS + + ++
Sbjct: 371 RCI-MFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVW 407
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = -3
Query: 568 LATSDCFDEVYLIDTASQELIRVLKNSTNIKSAAFNSNSSELYCFGDQGIVTVWSLCTFK 389
L S C D V LI T S +L+R ++ + + + L F + +VT + T K
Sbjct: 2342 LVVSGCEDGVILIHTTSSDLLRRIRGHGIVTQLSMSRECILLSLFDSKRMVTYSA--TAK 2399
Query: 388 SLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIYK---TSDLMTNEPI 245
L + + + C+T + G TG+ G +NI++ + L T +P+
Sbjct: 2400 KLDEVLVDDKI--ECVTVTRDGEFAVTGAVNGRINIWRMFPLTKLYTYQPL 2448
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 37.1 bits (82), Expect = 0.013
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Frame = -3
Query: 568 LATSDCFDEVYLIDTASQELIRVLKNSTNIKSAAFNSNSSELYCFGDQGIVTVWSLCTFK 389
L S C D V LI T S +L+R ++ + + + L F + +VT + T K
Sbjct: 2342 LVVSGCEDGVILIHTTSSDLLRRIRGHGIVTQLSMSRECILLSLFDSKRMVTYSA--TAK 2399
Query: 388 SLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIYK---TSDLMTNEPI 245
L + + + C+T + G TG+ G +NI++ + L T +P+
Sbjct: 2400 KLDEVLVDDKI--ECVTVTRDGEFAVTGAVNGRINIWRMFPLTKLYTYQPL 2448
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 586 SPNGKYLATSDCFDEVYLIDTASQELIRVLKNSTNIK-SAAFNSNSSELYCFGDQGIVTV 410
SP+GKY+ S EVY+ ++ + E+ L+ A F+S ++ G+ V +
Sbjct: 292 SPDGKYIVASGSEKEVYVFNSETMEIKGSLQTECGWNWDAIFSSEGRYIFTGGNDNQVKI 351
Query: 409 WSL 401
W +
Sbjct: 352 WDV 354
>AF003151-1|AAK18921.2| 1184|Caenorhabditis elegans Hypothetical
protein D1007.15 protein.
Length = 1184
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -3
Query: 712 DGKSAFIASKSNHSYCIYDLVKAEAKLVQLPQISKRPHIFQLSPNGKYLATSDCFDEVYL 533
+ ++ I SK+N S C+ D+ + +L+ P S ++ Q+S LAT D V L
Sbjct: 845 NASNSMIYSKANISVCVDDVEEPACRLLDHPVESVNNNVMQISSRLTALATDFRLDHVKL 904
Query: 532 IDTAS 518
+ +S
Sbjct: 905 LKMSS 909
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 32.3 bits (70), Expect = 0.37
Identities = 28/120 (23%), Positives = 54/120 (45%)
Frame = -3
Query: 388 SLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIYKTSDLMTNEPIPLKTVSNITTKI 209
SL K + S I S CG+ + TGS + + ++ T D+ L+T+++ I
Sbjct: 204 SLVKTISGHTKSVSVIKFSYCGKYLGTGSADKQIKVWNTVDMTY-----LQTLASHQLGI 258
Query: 208 TSLKFNSTTEILAACSAYYPNAVKLIHIPSYHVYQNFPKQSFNYNHIQVVNFSPNSGYMA 29
++S ++ +A SA VK+ + S + + N++ +F+P S +A
Sbjct: 259 NDFSWSSNSQFIA--SASDDTTVKIFDVISGACLRTMRGHT---NYVFCCSFNPQSSLIA 313
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Frame = -3
Query: 586 SPNGKYLATSDCFDEVYLIDTASQELIRVLKNSTNIKSAAFNSNS----SELYCFGDQGI 419
SPNGKYL ++ + L D + ++ N K F + S + + G
Sbjct: 391 SPNGKYLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPLGKHIISGSEDGR 450
Query: 418 VTVWSLCTFKSLKKFYDNGCVTASCITTSACGRLIATGSGE--GIVNIYK 275
+ VWS+ T K + + + + +IA+G E ++ I++
Sbjct: 451 ILVWSIQT-KQIVQILEGHTTPVLATDSHPTLNIIASGGLEPDNVIRIWR 499
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.64
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = -3
Query: 535 LIDTASQELIRVLKNSTN-IKSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKFYDNGC 359
+ + + + + LK N + FN SS + V +W + T +K +
Sbjct: 155 IFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSD 214
Query: 358 VTASCITTSACGRLIATGSGEGIVNIYKTSD 266
S ++ + G LIA+GS +G+V I+ T++
Sbjct: 215 -PVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = -3
Query: 568 LATSDCFDE-VYLIDTASQELIRVLK-NSTNIKSAAFNSNSSELYCFGDQGIVTVWSLCT 395
L S FDE V + D + I+ L +S + + +FN + S + G+V +W
Sbjct: 185 LVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN 244
Query: 394 FKSLKKFYDNGCVTASCITTSACGRLIATGSGEGIVNIYKTS 269
+ +K D+ + + S G+ I + + + ++ S
Sbjct: 245 GQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFS 286
>U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical
protein C33H5.7 protein.
Length = 326
Score = 31.5 bits (68), Expect = 0.64
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -3
Query: 727 AHFTPDGKSAFIASKSNHSYCIYDLVKAEAKLVQLPQISKRPHIFQLSPNGKYLATSD 554
A FTP+ + S + Y YD+ E L L ++ HI + SP AT+D
Sbjct: 251 ASFTPESSHIMVGSSDGYIY-FYDVETGEIALKTLAPNNQTCHIAEFSPQHFVAATAD 307
>AF016430-11|AAB65375.1| 387|Caenorhabditis elegans Hypothetical
protein C05C8.8 protein.
Length = 387
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Frame = -3
Query: 265 LMTNEPIP--LKTVSNITTKITSLKFNSTTEI--LAACSAYYPNAVKLIHI-------PS 119
++T IP LK +N+ +++T LK+N TTE+ P+ V ++ P+
Sbjct: 262 ILTTGTIPEKLKNFANLQSELTFLKYNKTTEVSWYNFKGIIRPDLVYVLFYHWSFRQKPN 321
Query: 118 YHVYQNFPKQSFNYNHIQVVN-FSPNSGYMAFSN 20
HV + PKQ + H + V+ S N +M F N
Sbjct: 322 VHVI-SIPKQIIHLRHYRSVDQNSLNGNWMEFYN 354
>U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical
protein F21H12.1 protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.5
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 4/134 (2%)
Frame = -3
Query: 586 SPNGKYLATSDCFDEVYLIDTASQELIRVLKNSTNIKSAAF---NSNSSELYCFGDQGIV 416
S +G+ L TS + + + D + L+ ++ ++ + A F N N + + Q V
Sbjct: 76 SRDGRKLLTSSADNSIAMFDVLAGTLLHRIRFNSMVTFAMFHPRNDNKAIVLQVNKQPTV 135
Query: 415 TVWSLCTFKSLKKFYDNGC-VTASCITTSACGRLIATGSGEGIVNIYKTSDLMTNEPIPL 239
+S L +ASC++ G+ I G+G+G + IY L
Sbjct: 136 EQFSPRIQTVLANDTPGSSDESASCVSYDRKGKYIIAGTGKGKLLIYNAETLKCVAWCKQ 195
Query: 238 KTVSNITTKITSLK 197
TV I I +K
Sbjct: 196 NTVQQIRQIIVPMK 209
>AF039716-4|AAB96739.1| 616|Caenorhabditis elegans Aminopeptidase p
protein 1 protein.
Length = 616
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -3
Query: 712 DGKSAFIASKSNHSYCIYDLVKAE-AKLVQLPQISKRPHIFQLSPNGKYLATSDCFDEVY 536
D KS KSN S Y V + + ++ + SK PH+ L+P Y S +E
Sbjct: 245 DEKSRAHFHKSNVSIHPYGEVYSWISNWLKAKEASKEPHMVYLTPETNYAIGSIIGEENS 304
Query: 535 LIDTASQELIRVLKN 491
++DT+ + + KN
Sbjct: 305 MVDTSLVQTAKATKN 319
>Z74038-6|CAA98496.1| 423|Caenorhabditis elegans Hypothetical
protein F58B4.5 protein.
Length = 423
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 471 ADFILVLFFNTLISS*DAVSIKYTSSKQSDVAK-YFP 578
ADF+L ++NT ++ D + + YT + D + YFP
Sbjct: 328 ADFLLEEYYNTFVNELDGMDVPYTFQQLKDSYQVYFP 364
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = -3
Query: 511 LIRVLKNSTNI--KSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKF----YDNGCV-- 356
+ R +K ST +SA F+ +++ L G + VW+ K K DN +
Sbjct: 205 MARSIKFSTKSYPESAVFSPDANYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMD 264
Query: 355 -TASCITTSACGRLIATGSGEGIVNIYK 275
CI+ S ++ATGS +G + ++K
Sbjct: 265 AAVRCISFSRDSEMLATGSIDGKIKVWK 292
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = -3
Query: 352 ASCITTSACGRLIATGSGEGIVNIYKTSDLMTNEPIPLKTVSNITTKITSLKFNSTTEIL 173
+SC+ S + +A G + V++YK S +E +KT+ + +ITS+ F++ L
Sbjct: 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE---VKTIVH-PAEITSVAFSNNGAFL 506
Query: 172 AA 167
A
Sbjct: 507 VA 508
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = -3
Query: 352 ASCITTSACGRLIATGSGEGIVNIYKTSDLMTNEPIPLKTVSNITTKITSLKFNSTTEIL 173
+SC+ S + +A G + V++YK S +E +KT+ + +ITS+ F++ L
Sbjct: 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE---VKTIVH-PAEITSVAFSNNGAFL 506
Query: 172 AA 167
A
Sbjct: 507 VA 508
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Frame = -3
Query: 511 LIRVLKNSTNI--KSAAFNSNSSELYCFGDQGIVTVWSLCTFKSLKKF----YDNGCV-- 356
+ R +K ST +SA F+ +++ L G + VW+ K K DN +
Sbjct: 205 MARSIKFSTKSYPESAVFSPDANYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMD 264
Query: 355 -TASCITTSACGRLIATGSGEGIVNIYK 275
CI+ S ++ATGS +G + ++K
Sbjct: 265 AAVRCISFSRDSEMLATGSIDGKIKVWK 292
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = -3
Query: 352 ASCITTSACGRLIATGSGEGIVNIYKTSDLMTNEPIPLKTVSNITTKITSLKFNSTTEIL 173
+SC+ S + +A G + V++YK S +E +KT+ + +ITS+ F++ L
Sbjct: 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE---VKTIVH-PAEITSVAFSNNGAFL 506
Query: 172 AA 167
A
Sbjct: 507 VA 508
>AF106579-9|AAC78202.1| 327|Caenorhabditis elegans Serpentine
receptor, class t protein34 protein.
Length = 327
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/75 (24%), Positives = 39/75 (52%)
Frame = -3
Query: 283 IYKTSDLMTNEPIPLKTVSNITTKITSLKFNSTTEILAACSAYYPNAVKLIHIPSYHVYQ 104
+YK +++ P+ +V N+T++ S K+ IL A Y + +++IP + V
Sbjct: 4 VYKYGSVLSI-PLYNCSVKNLTSEQWSEKYGERRPILGIVEATYGILINVLYIPVFFVI- 61
Query: 103 NFPKQSFNYNHIQVV 59
F K+ F+ + +++
Sbjct: 62 -FEKKQFSMSCYKIM 75
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -3
Query: 541 VYLIDTASQELIRVLKNS--TNIKSAAFNSNSSEL-YCFGDQGIVTVW 407
+++ D + IR + N+ ++ S F S L Y GD G+V VW
Sbjct: 251 IHVFDVEQRRRIRTIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVW 298
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -3
Query: 541 VYLIDTASQELIRVLKNS--TNIKSAAFNSNSSEL-YCFGDQGIVTVW 407
+++ D + IR + N+ ++ S F S L Y GD G+V VW
Sbjct: 292 IHVFDVEQRRRIRTIVNAHEDDVNSVCFADLGSNLIYSAGDDGLVKVW 339
>Z83016-1|CAB05407.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 733 TAAHFTPDGKSAFIASKSNHSYCIYDLVK 647
T F PD KS + K + C+Y LVK
Sbjct: 141 TRVVFAPDCKSVVFSVKRENKICVYKLVK 169
>Z82260-14|CAB05142.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 259 TNEPIPLKTVSNITTKITSLKFNSTTE 179
TN P + TV TK T+LK+ STT+
Sbjct: 475 TNAPSAISTVVGTFTKGTTLKYESTTK 501
>Z73104-10|CAA97437.2| 521|Caenorhabditis elegans Hypothetical
protein C32H11.1 protein.
Length = 521
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 259 TNEPIPLKTVSNITTKITSLKFNSTTE 179
TN P + TV TK T+LK+ STT+
Sbjct: 475 TNAPSAISTVVGTFTKGTTLKYESTTK 501
>Z68314-8|CAA92666.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 733 TAAHFTPDGKSAFIASKSNHSYCIYDLVK 647
T F PD KS + K + C+Y LVK
Sbjct: 141 TRVVFAPDCKSVVFSVKRENKICVYKLVK 169
>Z54281-9|CAA91052.1| 451|Caenorhabditis elegans Hypothetical
protein F46C5.9 protein.
Length = 451
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 733 TAAHFTPDGKSAFIASKSNHSYCIYDLVK 647
T F PD KS + K + C+Y LVK
Sbjct: 141 TRVVFAPDCKSVVFSVKRENKICVYKLVK 169
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,492,172
Number of Sequences: 27780
Number of extensions: 343498
Number of successful extensions: 1046
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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