Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e22f
(640 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 25 0.53
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.2
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 24 1.2
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 24 1.2
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 24 1.2
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 24 1.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 2.1
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 23 2.8
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 21 8.7
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 8.7
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 25.0 bits (52), Expect = 0.53
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -3
Query: 185 ISCLKFLELRFIFKG-DTMVYFLQISNN--EVFDQKTICVFTS 66
I C++ + F + D YFL++SNN + + T C + S
Sbjct: 77 IRCIESNMISFYLEATDDFAYFLEVSNNNFKTYSNVTTCSYYS 119
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L NI L W D
Sbjct: 21 PVANESEPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWND 62
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.8 bits (49), Expect = 1.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L NI L W D
Sbjct: 21 PVANESEPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWND 62
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 456 TICIFLYFRPTGCSHDSSI 400
T C+FL F CSH +S+
Sbjct: 290 TYCLFLLFVFCDCSHQASL 308
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 456 TICIFLYFRPTGCSHDSSI 400
T C+FL F CSH +S+
Sbjct: 290 TYCLFLLFVFCDCSHQASL 308
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 456 TICIFLYFRPTGCSHDSSI 400
T C+FL F CSH +S+
Sbjct: 290 TYCLFLLFVFCDCSHQASL 308
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N L W D
Sbjct: 21 PVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWND 62
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N L W D
Sbjct: 21 PVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWND 62
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N L W D
Sbjct: 21 PVANESEPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWND 62
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -2
Query: 480 FHQFVIIFTICIFLYFRPTGCSHDSSIFLFKFFSV 376
F I+FTI F P + F+ KF++V
Sbjct: 3 FQLLQIMFTIGKFFALTPRSIKLEKQTFIQKFYAV 37
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 21.0 bits (42), Expect = 8.7
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +1
Query: 319 DDGKYTAANIIPQAVSNVQY 378
D+GK+TA ++ P +++ Y
Sbjct: 36 DNGKFTALDVDPTLCTHLLY 55
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.0 bits (42), Expect = 8.7
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +3
Query: 51 CNIKLGSKNANCFLVKNFVVT 113
CN KLG +C NF T
Sbjct: 324 CNCKLGFMGRHCESKVNFCAT 344
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,642
Number of Sequences: 336
Number of extensions: 2836
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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