Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e22f
(640 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.050
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 27 0.15
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.62
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.62
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.62
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.62
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.62
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.62
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 25 0.62
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.62
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.62
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 0.62
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 25 0.82
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 24 1.1
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 24 1.1
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 4.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 4.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 4.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 7.6
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 28.7 bits (61), Expect = 0.050
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 169 NFKHEINPVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
N+ I PV + RL+ + + +LID NQ ++ N+ ++ W D
Sbjct: 31 NYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWND 79
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +1
Query: 289 IDLKPVWTDDDDGKYTAANIIPQAVSNVQYTEKLKQKYRTIVGTPS 426
ID + +W D+DGK Q S Q E + +VGTP+
Sbjct: 4 IDDELLWCPDNDGKMVDLTQCLQESSTGQSVEFSPMELNALVGTPA 49
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.62
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N LK W D
Sbjct: 4 PVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 45
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.62
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N LK W D
Sbjct: 4 PVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 45
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.62
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N LK W D
Sbjct: 4 PVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 45
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.62
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N LK W D
Sbjct: 4 PVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 45
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.62
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N LK W D
Sbjct: 4 PVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 45
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.62
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N LK W D
Sbjct: 4 PVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 45
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.0 bits (52), Expect = 0.62
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 166 RNFKHEINPVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
R + I PV++ ++ +LI+ + NQ + N+ L+ +WTD
Sbjct: 36 RGYNKLIRPVQNMTEKVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTD 85
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.62
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N LK W D
Sbjct: 72 PVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 113
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.62
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L Q++ID + NQ L+ N LK W D
Sbjct: 72 PVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVD 113
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.62
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 184 INPVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
+ P ++ L+ + +ID + NQ L+ N + +WTD
Sbjct: 21 VRPAENSSQPLAVVFGLSLHHIIDVDEKNQILTTNCWVTQIWTD 64
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 24.6 bits (51), Expect = 0.82
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 169 NFKHEINPVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
N+ I PV + + L + +LID +Q L+ N+ L+ W D
Sbjct: 31 NYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQD 79
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 24.2 bits (50), Expect = 1.1
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +1
Query: 262 KPNQELSDNIDLKPVWTDDDDGKYTAANIIPQAVSNVQYTEKLKQKYRTIV-----GTPS 426
+P ++LS + +W DD D + +A + + +K + Y T V G
Sbjct: 24 RPRRKLSKKQQMLGIWADDSDEEELSAR------PSFKTFDKGPKNYTTPVNFVAGGIQQ 77
Query: 427 WAEIKKNTDCEDDDK 471
+ K+ TD +DDD+
Sbjct: 78 AGKPKEETDDKDDDE 92
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 169 NFKHEINPVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
N+ + PV + L + K +LID NQ ++ N+ ++ W D
Sbjct: 39 NYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYD 87
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 169 NFKHEINPVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
N+ + PV + L + K +LID NQ ++ N+ ++ W D
Sbjct: 39 NYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYD 87
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 24.2 bits (50), Expect = 1.1
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 169 NFKHEINPVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
N+ + PV + L+ + K +LID NQ ++ N+ ++ W D
Sbjct: 35 NYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQSWYD 83
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 22.2 bits (45), Expect = 4.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 190 PVKDEESRLSQILFTKKQKLIDKLKPNQELSDNIDLKPVWTD 315
PV +E L ++ID + NQ L N+ LK W D
Sbjct: 41 PVGNESEPLVLSFGLTLMQIIDVDEKNQLLITNLWLKLEWND 82
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 172 SFWNYVSYLRVTLWSTFYRSVTTK 101
S W + Y+ + W+ FY V+ +
Sbjct: 108 SCWTNIYYIIILAWALFYLLVSLR 131
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 172 SFWNYVSYLRVTLWSTFYRSVTTK 101
S W + Y+ + W+ FY V+ +
Sbjct: 161 SCWTNIYYIIILAWALFYLLVSLR 184
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 7.6
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Frame = +1
Query: 310 TDDDDGK---YTAANIIPQAVSNVQYT-EKLK------QKYRTIVGTPSWAEIKKNTDCE 459
+D +DG+ + +++ S+ Y EKL+ +KY I TPS A DC+
Sbjct: 273 SDHNDGRLRYWRTPSVVVSDYSDYSYLDEKLERNDLDLEKYEGISSTPSQASSCSCLDCD 332
Query: 460 D 462
+
Sbjct: 333 E 333
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,726
Number of Sequences: 438
Number of extensions: 2919
Number of successful extensions: 23
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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