Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e21r
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.57 
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    24   5.3  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   9.3  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   9.3  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -3

Query: 299 SCSCADLYYSTHNLSLRNAEWEAKTLCNMHWN 204
           S +C D Y    +LS+ N E E++ LC   ++
Sbjct: 175 SATCRDTYGLPDSLSVMNGEDESRALCTSEYS 206


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 696 VYVDMFTRFQAGFLSAIV 643
           VYV MFTRF     SA++
Sbjct: 553 VYVRMFTRFTQEIFSALI 570


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 327  LYQAHLYLGLMLMCGFVLFDTQLII 253
            LY   LY+G+  + G   FD  LI+
Sbjct: 938  LYGVFLYMGVSALKGLQFFDRLLIM 962


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 412 PAASFSKHSSSREAYKYQGSAE 477
           P A F++HSSSR A K+ G  E
Sbjct: 415 PRALFARHSSSRLA-KFIGEQE 435


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 394  CATEE*PAASFSKHSSS--REAYKYQGSAEQSSYYDRWVNYTDIFKQG 531
            C++     ++ S HSSS    A  + G  +Q S+Y  + +   +F  G
Sbjct: 1090 CSSTSSSHSNHSSHSSSSSNSAGSWAGMGKQESHYVMYPSNVPVFAGG 1137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,409
Number of Sequences: 2352
Number of extensions: 15755
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)