Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e20r
(783 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.2
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 4.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 4.2
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 5.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 5.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.6
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 7.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.8
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 492 VLTTDVRSNSVLNYYNGSPSLRAKTHDY 575
V+ + N Y S SLR++THD+
Sbjct: 197 VVNIEKSGNESKKYATSSNSLRSRTHDF 224
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 498 TTDVRSNSVLNYYNGS 545
T D+ N + N+YNGS
Sbjct: 458 TLDLGENRISNFYNGS 473
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.6 bits (46), Expect = 4.2
Identities = 6/16 (37%), Positives = 14/16 (87%)
Frame = -1
Query: 294 GFAYGTSLVIVKDRLA 247
GF +G++++++ DRL+
Sbjct: 668 GFGFGSAVLLISDRLS 683
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.6 bits (46), Expect = 4.2
Identities = 6/16 (37%), Positives = 14/16 (87%)
Frame = -1
Query: 294 GFAYGTSLVIVKDRLA 247
GF +G++++++ DRL+
Sbjct: 706 GFGFGSAVLLISDRLS 721
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +3
Query: 432 IGLDGQKSSQPIIEPLPS*KVLTTDVRSNSVLNYYNGSPS 551
I LDG+ P+ PL + ++ VL ++ G P+
Sbjct: 966 ISLDGKPLGFPLDRPLSLGALSVPNIFVKDVLVFHQGQPT 1005
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 5.6
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +3
Query: 492 VLTTDVRS--NSVLNYYNGSPSLRAKTHDY 575
VL +++ N Y S SLR +THD+
Sbjct: 195 VLVVNIKKSGNESKKYATSSNSLRNRTHDF 224
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.2 bits (45), Expect = 5.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 205 KFEQLHFSNLIFIINGYIDNLKPISI 128
K H+S + F+ N I NL+P+S+
Sbjct: 1030 KSRLFHYSVVPFVSNHDILNLRPLSM 1055
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 7.4
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 120 YIKILMGFKLSM*PLIINIKFEKCSCSNL*YVVKKIF 230
+ IL+G + + +I+N+ + K S + V+KIF
Sbjct: 304 FTMILVGLSVVITIVILNVHYRKPSTHKMAPWVRKIF 340
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 492 VLTTDVRSNSVLNYYNGSPSLRAKTHDY 575
V+ + N Y S SLR++TH +
Sbjct: 197 VVNIEKSGNESKKYATSSNSLRSRTHGF 224
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 492 VLTTDVRSNSVLNYYNGSPSLRAKTHDY 575
V+ + N Y S SLR++TH +
Sbjct: 197 VVNIEKSGNESKKYATSSNSLRSRTHGF 224
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 9.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 462 PIIEPLPS*KVLTTDVRSNSVLNYYNGSPSL 554
PIIEP + L+ +R+ +V G P L
Sbjct: 611 PIIEPFTFQEGLSEGMRTRTVCGVAAGDPPL 641
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,607
Number of Sequences: 438
Number of extensions: 4264
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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