Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e20f
(639 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934 134 6e-32
10_08_1021 - 22315487-22315493,22317051-22317154,22317227-223173... 116 1e-26
03_06_0726 - 35761959-35762063,35762232-35762336,35762543-357626... 113 1e-25
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 95 4e-20
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 91 7e-19
07_03_0910 - 22519006-22519159,22519300-22519355,22519433-225197... 91 9e-19
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 88 6e-18
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 75 4e-14
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523... 74 8e-14
08_02_1409 - 26864544-26864658,26864787-26864916,26864953-268652... 68 5e-12
03_02_0844 + 11695159-11695263,11695402-11695463,11695789-116958... 68 5e-12
05_06_0203 + 26348360-26348458,26349584-26349645,26349808-263498... 66 3e-11
01_06_1112 + 34606171-34606266,34607170-34607231,34607932-346080... 65 4e-11
01_06_1618 - 38681729-38683989,38685577-38685796 40 0.002
02_05_0566 - 30017031-30017309,30018077-30018172,30018261-300183... 34 0.083
02_05_0073 - 25602268-25603182,25603273-25604190 29 2.4
10_08_0738 - 20212220-20212282,20212387-20212593,20212690-202128... 29 3.1
12_01_0093 + 732276-732619,732722-732731 29 4.1
08_01_0675 - 5840867-5841253,5842699-5842997,5844022-5844202 29 4.1
03_04_0143 + 17670103-17670430,17670511-17670785,17670897-176713... 29 4.1
12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264... 28 5.4
11_03_0150 + 10810322-10810380,10810530-10810593,10810803-108110... 28 5.4
11_02_0138 - 8708483-8709033,8709163-8709265,8709312-8709359,871... 28 5.4
06_02_0193 - 12874300-12874863 28 7.2
02_02_0704 + 13095449-13095584,13095671-13095990,13096102-130964... 28 7.2
01_01_0432 - 3276305-3276356,3276687-3276805 28 7.2
10_02_0061 - 4812903-4812940,4813140-4813536 27 9.5
04_01_0501 - 6558120-6559312,6559441-6559518,6559818-6559877,656... 27 9.5
03_06_0259 + 32712976-32714335,32714454-32714587,32714904-327151... 27 9.5
01_05_0514 - 22876264-22878567 27 9.5
>03_02_0554 - 9426195-9426674,9427163-9427252,9428143-9428934
Length = 453
Score = 134 bits (324), Expect = 6e-32
Identities = 61/126 (48%), Positives = 79/126 (62%)
Frame = +3
Query: 105 RKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKW 284
R+L ++ N C +C NPQW SV+YGV++CLECSG HR LGVH+SFVRSVTMD W
Sbjct: 7 RRLRELQGQAGNKTCVDCAQRNPQWASVSYGVFMCLECSGKHRGLGVHISFVRSVTMDSW 66
Query: 285 KDVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYNTKAAAMYRQKIAALAEGRPWSPS 464
+ +L KM GGN + F ++ + KYN+ AAA YR +I A+AEGRPW+
Sbjct: 67 TEAQLRKMEAGGNDRLNAFLAAR-GVPKETPHVAKYNSNAAAAYRDRIVAVAEGRPWTDP 125
Query: 465 DYKPET 482
ET
Sbjct: 126 PVVKET 131
>10_08_1021 -
22315487-22315493,22317051-22317154,22317227-22317328,
22317623-22317745,22318038-22318094,22318498-22318758,
22318948-22319377,22320168-22320286,22320515-22320595
Length = 427
Score = 116 bits (280), Expect = 1e-26
Identities = 51/104 (49%), Positives = 71/104 (68%)
Frame = +3
Query: 120 IRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVEL 299
+R +N CF+C NP W SVTYGV++C++CS VHRSLGVH+SFVRS +D W +L
Sbjct: 20 LRAKSDNKMCFDCNAKNPTWASVTYGVFLCIDCSAVHRSLGVHVSFVRSTNLDSWTPEQL 79
Query: 300 EKMMVGGNAKAREFFESQPDISSGMTIPQKYNTKAAAMYRQKIA 431
+ M+ GGN +A+ FF+ Q + G I KY ++AA +YRQ +A
Sbjct: 80 KMMVYGGNNRAQAFFK-QHGWTDGGKIEAKYTSRAADLYRQLLA 122
>03_06_0726 -
35761959-35762063,35762232-35762336,35762543-35762665,
35763056-35763316,35763449-35763905,35764637-35764755,
35764851-35764919
Length = 412
Score = 113 bits (271), Expect = 1e-25
Identities = 48/96 (50%), Positives = 65/96 (67%)
Frame = +3
Query: 135 ENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVELEKMMV 314
EN CF+C NP W SVTYG+++CL+CS VHRSLGVH++FVRS +D W +L+ M
Sbjct: 21 ENKMCFDCSAKNPTWASVTYGIFLCLDCSAVHRSLGVHITFVRSTNLDSWTPDQLKMMAF 80
Query: 315 GGNAKAREFFESQPDISSGMTIPQKYNTKAAAMYRQ 422
GGN +A FF+ Q + G + KY ++AA +YRQ
Sbjct: 81 GGNNRAHAFFK-QHGWTDGGKVDAKYTSRAAELYRQ 115
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 66 LSLIDKMASPRTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGV 245
+SL DKM RKL + + EN C +C + +P+W S GV+ICL+CSG+HRSLG
Sbjct: 803 MSLTDKM------RKLKELLHKSENRICADCSSPDPKWASANIGVFICLKCSGIHRSLGT 856
Query: 246 HLSFVRSVTMDKWKDVELEKMM-VGGNAKAREFFES 350
H+S V SVT+D+W D E+ M+ VGGN+ A +E+
Sbjct: 857 HISKVLSVTLDEWTDDEINSMLEVGGNSYANAIYEA 892
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 91.1 bits (216), Expect = 7e-19
Identities = 39/82 (47%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 108 KLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWK 287
KL + + EN C +C +P+W S GV+ICL+CSGVHRSLG H+S V SVT+D+W
Sbjct: 13 KLKELLHRSENRICADCSAPDPKWASANIGVFICLKCSGVHRSLGTHISKVLSVTLDQWS 72
Query: 288 DVELEKMM-VGGNAKAREFFES 350
D E++ ++ VGGN+ A +E+
Sbjct: 73 DNEIDNVIEVGGNSHANAIYET 94
>07_03_0910 -
22519006-22519159,22519300-22519355,22519433-22519702,
22519808-22519986,22520146-22520374,22520985-22521180,
22521728-22521818,22521921-22521975,22522812-22522902,
22523366-22523424,22524000-22524050
Length = 476
Score = 90.6 bits (215), Expect = 9e-19
Identities = 36/93 (38%), Positives = 60/93 (64%)
Frame = +3
Query: 75 IDKMASPRTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLS 254
+ K + + K+ L + L EN +C +C + P+W SV G++IC++CSG+HRSLGVH+S
Sbjct: 7 VSKELNAKHKKILEGLLRLPENRECADCKSKGPRWASVNLGIFICMQCSGIHRSLGVHIS 66
Query: 255 FVRSVTMDKWKDVELEKMMVGGNAKAREFFESQ 353
VRS T+D W ++ + GN K+ ++E++
Sbjct: 67 KVRSATLDTWLPEQVAFIQSMGNEKSNSYWEAE 99
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 87.8 bits (208), Expect = 6e-18
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 99 TKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMD 278
T +L + N N C +CG +P+WVS+T+GV+IC++CSG HRSLGVH+S V SV +D
Sbjct: 49 TAERLEHLLNQPANKICADCGAPDPKWVSLTFGVFICIKCSGAHRSLGVHISKVVSVKLD 108
Query: 279 KWKDVELEKMM-VGGNAKAREFFES 350
+W D +++ + GGNA +E+
Sbjct: 109 EWTDEQVDILADSGGNAAVNMIYEA 133
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 75.4 bits (177), Expect = 4e-14
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = +3
Query: 90 SPRTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSV 269
S + + ++ +R + N+ C +CG P W S+ G+ +C+ECSGVHR+LGVH+S VRS+
Sbjct: 406 SMKPDKPIDLLRKVVGNNICADCGAAEPDWASLNLGILLCIECSGVHRNLGVHISKVRSL 465
Query: 270 TMD--KWKDVELEKMMVGGNAKAREFFESQPDISSGM 374
T+D W+ + GN A +E SS +
Sbjct: 466 TLDVRVWEPSVINLFQSLGNTFANTIWEDMLPSSSSV 502
>02_05_0042 +
25351648-25351724,25351983-25352010,25352311-25352373,
25352880-25352945,25353029-25353076,25353338-25353379,
25353499-25353714,25354066-25354188,25354352-25354564,
25354930-25355016,25355259-25355507,25356386-25356507,
25357135-25357225,25358467-25358882,25359489-25359609
Length = 653
Score = 74.1 bits (174), Expect = 8e-14
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +3
Query: 114 NSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTMD--KWK 287
N +RN+ N C EC + +P W S+ G+ IC+ECSG HR+LGVH+S VRS+ +D W+
Sbjct: 357 NHLRNIPGNDSCAECRSPDPDWASLNLGILICIECSGAHRNLGVHISKVRSLRLDVKVWE 416
Query: 288 DVELEKMMVGGNAKAREFFES 350
V ++ GN +E+
Sbjct: 417 PVIMDLFHELGNDYTNSIWEA 437
>08_02_1409 -
26864544-26864658,26864787-26864916,26864953-26865283,
26866507-26866626,26867489-26867821,26867915-26868001,
26868093-26868320,26868434-26868565,26868649-26868861,
26869376-26869417,26869829-26869894,26870230-26870274,
26870367-26870429,26870757-26870827,26871149-26871249,
26871458-26871534,26872415-26872459
Length = 732
Score = 68.1 bits (159), Expect = 5e-12
Identities = 25/60 (41%), Positives = 42/60 (70%)
Frame = +3
Query: 96 RTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTM 275
+ ++ ++ +R +D N C +CG++ P W S+ G +C+ECSGVHR+LGVH+S + S T+
Sbjct: 448 KPEKPIDLLRKVDGNIICVDCGSMEPDWASLNLGALLCIECSGVHRNLGVHISKLISTTL 507
>03_02_0844 +
11695159-11695263,11695402-11695463,11695789-11695876,
11695958-11696019,11696250-11696346,11696592-11696984,
11697072-11697611,11697856-11697966,11698102-11698242,
11698290-11698394,11698480-11698557,11699346-11699472,
11699580-11699625,11699709-11699754
Length = 666
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/100 (34%), Positives = 54/100 (54%)
Frame = +3
Query: 96 RTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTM 275
R +R + + L N +C C L PQ+V ++ ++C+ CSG+HR H V+SV+M
Sbjct: 12 RNERVVRGLLKLPPNRRCINCNGLGPQYVCTSFWTFVCISCSGIHREF-THR--VKSVSM 68
Query: 276 DKWKDVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYN 395
+ E+E + GGN +ARE F + D + M +P N
Sbjct: 69 STFTTQEVEALQNGGNQRARESFLKEFD-AQKMRLPDSSN 107
>05_06_0203 +
26348360-26348458,26349584-26349645,26349808-26349895,
26349985-26350085,26350130-26350223,26350323-26350730,
26351090-26351521,26351612-26351755,26351824-26351940,
26352842-26352949
Length = 550
Score = 65.7 bits (153), Expect = 3e-11
Identities = 29/96 (30%), Positives = 52/96 (54%)
Frame = +3
Query: 96 RTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTM 275
R +R + ++ L N +C C +L PQ+V ++ ++C+ CSG+HR H V+S++M
Sbjct: 10 RNERAIRALLKLPGNRRCINCNSLGPQYVCTSFSTFVCVSCSGIHREF-THR--VKSISM 66
Query: 276 DKWKDVELEKMMVGGNAKAREFFESQPDISSGMTIP 383
K+ E+ + GGN + +E + D G +P
Sbjct: 67 AKFTSQEVSALQEGGNERGKEIYLKHWDF-QGQPLP 101
>01_06_1112 +
34606171-34606266,34607170-34607231,34607932-34608019,
34608104-34608165,34608246-34608342,34608499-34608930,
34609042-34610061,34610151-34610282,34610354-34610470,
34610982-34611062,34611321-34611447,34611547-34611592,
34611663-34611708
Length = 801
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/100 (33%), Positives = 52/100 (52%)
Frame = +3
Query: 96 RTKRKLNSIRNLDENHKCFECGTLNPQWVSVTYGVWICLECSGVHRSLGVHLSFVRSVTM 275
R ++ + + L N KC C ++ PQ+V + +ICL CSG+HR H V+SV+M
Sbjct: 9 RNEKIIRGLMKLPPNRKCINCNSVGPQYVCTNFWTFICLSCSGIHREF-THR--VKSVSM 65
Query: 276 DKWKDVELEKMMVGGNAKAREFFESQPDISSGMTIPQKYN 395
K+ E+ + GGN +AR+ + D M +P N
Sbjct: 66 AKFTTQEVRSLEQGGNQRARDIYLKDWDWQR-MRLPDNSN 104
>01_06_1618 - 38681729-38683989,38685577-38685796
Length = 826
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = -2
Query: 632 RLLWGVTEAGVAAASILAVVANVVIRSACRQRVVRRVE 519
+L+ G+ AGVAAA ILAVV V++R + R + +RRVE
Sbjct: 469 KLIIGLVVAGVAAAVILAVVVTVLVRRSRRLKALRRVE 506
>02_05_0566 -
30017031-30017309,30018077-30018172,30018261-30018377,
30018538-30018667,30018866-30019029,30019480-30019485
Length = 263
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 258 VRSVTMDKWKDVELEKMM-VGGNAKAREFFES 350
V SVT+D W D +++ M+ +GGN+ A +ES
Sbjct: 3 VLSVTLDDWSDSDIDSMLEIGGNSYANSIYES 34
>02_05_0073 - 25602268-25603182,25603273-25604190
Length = 610
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 444 GRPWSPSDYKPETIEK-PQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNS 620
G PW+PS ++P ++E + W SR + D + GS ++ S R + +
Sbjct: 500 GNPWTPS-WEPNSVESTDRTWSASRSTNNGDEVV-EQGSSSHAGARSPLNRSRQSSKQRA 557
Query: 621 PKQSHS 638
+ HS
Sbjct: 558 AQPEHS 563
>10_08_0738 -
20212220-20212282,20212387-20212593,20212690-20212819,
20212919-20213089,20213311-20213433,20213517-20213618,
20214123-20214880
Length = 517
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -2
Query: 626 LWGVTEAGVAAASILAVVANVVIRSACRQRVVRRV 522
LW + AG AAA +LA++ V + CR+R R+
Sbjct: 74 LWVLVAAGAAAAVVLALLIVVCLCRRCRRRRCSRL 108
>12_01_0093 + 732276-732619,732722-732731
Length = 117
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -1
Query: 546 SAACCPKSRNRETGATPEASRSSRACNPMDSMGGPQLKPRSFGGTSQRPWYC 391
SAACC R+ + AT A R + ACN + ++ G + + G + P C
Sbjct: 50 SAACCSGVRSLNSAATTTADRRT-ACNCLKNVAG-SISGLNAGNAASIPSKC 99
>08_01_0675 - 5840867-5841253,5842699-5842997,5844022-5844202
Length = 288
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 399 KAAAMYRQKIAALAEGRPWSPSDYK--PETIEKPQEWLQSRDFYSSDNTLPTSGSDNNIS 572
K YR + A W +++ P+ + ++W+ R FY + T+P+ S+ ++
Sbjct: 128 KTLVFYRGR-APKGRKTEWVMHEFRLEPQPLHLKEDWVLCRVFYKTRQTIPSPSSEEAVT 186
Query: 573 YHSE 584
+E
Sbjct: 187 LPNE 190
>03_04_0143 +
17670103-17670430,17670511-17670785,17670897-17671376,
17671454-17671849,17673215-17673289,17673939-17673960,
17674041-17674129,17675204-17675495,17676019-17676087,
17676394-17676572
Length = 734
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 183 SVTYGVWICLECSGVHRSLGVHLSFVRSVTMDKWKDVELEKMMVG 317
S ++ +WIC SGV + +H +V V D + +++ KM G
Sbjct: 591 SSSHNLWICFHQSGVVKP-SIHCFYVLVVLFDTRRRIQMMKMRRG 634
>12_01_0343 +
2640822-2641106,2641488-2641556,2641708-2641887,
2642015-2642081,2643237-2644015
Length = 459
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 441 EGRPWSPSDYKPETIEKPQEWLQS--RDFYSSDNTLPTSGSDNNISYHSEYG 590
EGR SP D +T+ P+ L + R++ + + T+ +G D + +H E G
Sbjct: 235 EGRSQSPIDINTKTVV-PRSDLDTLDRNYNAVNATIVNNGKDITMKFHGEVG 285
>11_03_0150 +
10810322-10810380,10810530-10810593,10810803-10811047,
10811627-10811747,10811821-10811895,10811986-10812112,
10812194-10812939,10813065-10813195,10813547-10813636,
10814000-10814105
Length = 587
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = -1
Query: 375 SSQN*CPVDSRRTRGPSRCLRPSFSQVPRPST 280
SSQN S R R PS+ RP SQ RPS+
Sbjct: 416 SSQNERLESSERQRPPSQSYRPQSSQGQRPSS 447
>11_02_0138 -
8708483-8709033,8709163-8709265,8709312-8709359,
8713887-8714359,8716353-8716508,8716572-8716617,
8716657-8716713
Length = 477
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +3
Query: 444 GRPWSPSDYKPETIEKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSGRYTGFGNSP 623
G W D+ +E E+L RDF + ++ + + + S YG G +P
Sbjct: 128 GARWYADDFNKSQLEAAGEFLSPRDFDGHGTHVASTAAGSVVRNVSFYGLASGIAQGGAP 187
Query: 624 K 626
K
Sbjct: 188 K 188
>06_02_0193 - 12874300-12874863
Length = 187
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
Frame = +3
Query: 198 VWICLECSGVHR---SLGVHL-SFVRSVTMDK 281
V+IC+ECS VHR ++ H S +RS M+K
Sbjct: 42 VYICVECSEVHRNQQTMAAHCRSHIRSDGMEK 73
>02_02_0704 +
13095449-13095584,13095671-13095990,13096102-13096423,
13096556-13096632,13096744-13097127
Length = 412
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +3
Query: 336 EFFESQPDISSGMTIPQKYNTKAAAMYRQKIAALAEGRPWSPSDYKPETIEKPQEWLQSR 515
EF +P +S + + + AA +++ A +E R SP PE + +WLQS
Sbjct: 74 EFIPLKPSLSLSSSEEESTHADAAKSGKKEEAETSE-RHSSPPPPPPEAKKVTPDWLQSV 132
Query: 516 DFYSSD 533
+S +
Sbjct: 133 QLWSQE 138
>01_01_0432 - 3276305-3276356,3276687-3276805
Length = 56
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -2
Query: 446 ALS*SRDLLAVHRSGLGIVLLWYSHPRTDVRLT 348
A+ S+++ AVH +G+V+L Y H ++RL+
Sbjct: 2 AMDMSKEMRAVHPIAIGLVVLSYHHVFEEMRLS 34
>10_02_0061 - 4812903-4812940,4813140-4813536
Length = 144
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Frame = +1
Query: 250 CHSFAPSLWT-------SGRT-WNLRK*W-SEATRRPASSSRVNRTSVLG*LYHRSTIP 399
C PS W +G T W R+ W EATRR SS+ V + +G L RS P
Sbjct: 19 CSPLPPSHWRPRRGLRQNGSTRWRWRQWWWLEATRRANSSTAVGGSMAVGRLLPRSRSP 77
>04_01_0501 -
6558120-6559312,6559441-6559518,6559818-6559877,
6560000-6560083,6560407-6560566
Length = 524
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 431 RDLLAVHRSGLGIVLLWYSHPRTDVRLTLE 342
+D +AVH SG G V WY + DVR+ +E
Sbjct: 482 KDPVAVHLSGWGNVAEWYL-GKQDVRVNIE 510
>03_06_0259 +
32712976-32714335,32714454-32714587,32714904-32715144,
32715254-32715462,32715522-32715583,32715690-32715801,
32715916-32716208,32716400-32716520
Length = 843
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 626 LWGVTEAGVAAASILAVVANVVIRSACRQRVVRR 525
L G+ A +AAAS +AVVA V +R ++ V+ R
Sbjct: 396 LAGIAMAALAAASAIAVVAVVAVRRKNKKGVMVR 429
>01_05_0514 - 22876264-22878567
Length = 767
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/35 (40%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -2
Query: 620 GVTEAGVAAASI-LAVVANVVIRSACRQRVVRRVE 519
G+ AGV AA++ LAV+ V++ + R + +RR+E
Sbjct: 395 GLVVAGVVAAAVTLAVLVAVLVMRSRRAKALRRLE 429
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,499,204
Number of Sequences: 37544
Number of extensions: 444856
Number of successful extensions: 1466
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -