Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e20f
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    26   1.2  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   2.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   2.0  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    25   2.0  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   2.0  
AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    25   2.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.7  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.2  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.2  

>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 571 ATTASMEAAATPASVTPQSNR 633
           A T+S  AAATP + TPQ  R
Sbjct: 73  AGTSSHRAAATPTTPTPQPRR 93


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 486 EKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSG 596
           E+P   LQS    SS  +  +SG+   +S +  YG G
Sbjct: 602 EEPMTPLQSTTALSSITSFSSSGNTTVVSDYDVYGKG 638


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 486 EKPQEWLQSRDFYSSDNTLPTSGSDNNISYHSEYGSG 596
           E+P   LQS    SS  +  +SG+   +S +  YG G
Sbjct: 603 EEPMTPLQSTTALSSITSFSSSGNTTVVSDYDVYGKG 639


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 623 WGVTEAGVAAASILAVVANVVIRSACRQRVVRRVEIA 513
           WG TE+  A+   L V   V   S CRQ + R + IA
Sbjct: 250 WGKTESASASERKLKVELTVQDPSRCRQ-IYRGINIA 285


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +1

Query: 199 SGYAWSARACIEASVFTCHSFAPSLWTSGRTWNLRK*WSEATRRP 333
           SG   S R  I  ++     +A S+W     +  RK W     RP
Sbjct: 753 SGPRSSRRRIIANTIIAGIRYASSIWAESLKFECRKQWLRRCHRP 797


>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 401 LGIVLLWYSHPR 366
           +G   LWYSHPR
Sbjct: 1   MGFANLWYSHPR 12


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = -2

Query: 176  LRIQSSALKAFMV--LVEVAD*VQLAFGTW*CHFIY**KWEVFLKRLHQTRD 27
            LR+  + L  F V  L +  + ++LAF  W C   Y  +++ +LK     RD
Sbjct: 893  LRLDHNRLVEFNVWLLPKQLNDIRLAFNAWSCECDYVTRFQEYLKTYDFVRD 944


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 271 LWTSGRTWNLRK*WSEATRRPASSSRV 351
           LW   +TW  R  W   + R AS+ ++
Sbjct: 123 LWLLSQTWITRHLWMAKSDRNASTEKL 149


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 635 VRLLWGVTEAGVAAASILAVVANVV 561
           +RL W V +AG+A   +L  +  VV
Sbjct: 209 LRLSWVVGQAGIAQGVLLICMTTVV 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,915
Number of Sequences: 2352
Number of extensions: 16298
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)