Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e17r
         (650 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071501-1|AAL49123.1|  248|Drosophila melanogaster RE55868p pro...   204   8e-53
AE013599-3052|AAF57437.2|  248|Drosophila melanogaster CG33786-P...   204   8e-53
AY071481-1|AAL49103.1|  124|Drosophila melanogaster RE55111p pro...    29   4.1  
AE014297-1787|AAF55011.1|  124|Drosophila melanogaster CG9922-PA...    29   4.1  
AY070544-1|AAL48015.1|  388|Drosophila melanogaster LD25151p pro...    29   7.2  
AE014297-468|AAF54120.1|  388|Drosophila melanogaster CG10267-PA...    29   7.2  

>AY071501-1|AAL49123.1|  248|Drosophila melanogaster RE55868p
           protein.
          Length = 248

 Score =  204 bits (498), Expect = 8e-53
 Identities = 97/192 (50%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
 Frame = -2

Query: 649 QVIAVPTDTIYGXACSANCPLAIKKLYSIKGREAVKPVAICVTSVADLRKWGEASHISDK 470
           QVIA+PTDT+YG AC AN   AI++LY IKGR+  KPVAICV ++  LR++G+A+H+SD+
Sbjct: 52  QVIALPTDTVYGLACDANNETAIQQLYEIKGRDEHKPVAICVHNIDALRRFGQAAHLSDE 111

Query: 469 LLDSLLPGPVTVVLQXTXHLDNPFLNPSTTKIGIRIPKHDXMNTVTKIF-DMPVALTSAN 293
           LL  LLPGP+T+V++ T  L N FLNPST+KIGIRIP  + M  +  ++ + P+ALTSAN
Sbjct: 112 LLTRLLPGPLTIVIERTSQLSNRFLNPSTSKIGIRIPDFNFMRDLCAVWQEKPLALTSAN 171

Query: 292 FSNXPSTLSIKEFEHLYPHLAAIFDGGLLSQGLEQNRTGSTVIDLSKNGLYKIIRKGISY 113
            S+ PS+L + EF  L+P L A+FD G +    E+ R  STVIDL+  G Y+I+R G++ 
Sbjct: 172 RSSAPSSLQVSEFRSLWPQLGAVFDAGRIGL-TEERRLASTVIDLATPGYYEIVRAGVAL 230

Query: 112 DNVIKVVERYGL 77
              + ++E +G+
Sbjct: 231 KPTLSLMEEFGI 242


>AE013599-3052|AAF57437.2|  248|Drosophila melanogaster CG33786-PA,
           isoform A protein.
          Length = 248

 Score =  204 bits (498), Expect = 8e-53
 Identities = 97/192 (50%), Positives = 138/192 (71%), Gaps = 1/192 (0%)
 Frame = -2

Query: 649 QVIAVPTDTIYGXACSANCPLAIKKLYSIKGREAVKPVAICVTSVADLRKWGEASHISDK 470
           QVIA+PTDT+YG AC AN   AI++LY IKGR+  KPVAICV ++  LR++G+A+H+SD+
Sbjct: 52  QVIALPTDTVYGLACDANNETAIQQLYEIKGRDEHKPVAICVHNIDALRRFGQAAHLSDE 111

Query: 469 LLDSLLPGPVTVVLQXTXHLDNPFLNPSTTKIGIRIPKHDXMNTVTKIF-DMPVALTSAN 293
           LL  LLPGP+T+V++ T  L N FLNPST+KIGIRIP  + M  +  ++ + P+ALTSAN
Sbjct: 112 LLTRLLPGPLTIVIERTSQLSNRFLNPSTSKIGIRIPDFNFMRDLCAVWQEKPLALTSAN 171

Query: 292 FSNXPSTLSIKEFEHLYPHLAAIFDGGLLSQGLEQNRTGSTVIDLSKNGLYKIIRKGISY 113
            S+ PS+L + EF  L+P L A+FD G +    E+ R  STVIDL+  G Y+I+R G++ 
Sbjct: 172 RSSAPSSLQVSEFRSLWPQLGAVFDAGRIGL-TEERRLASTVIDLATPGYYEIVRAGVAL 230

Query: 112 DNVIKVVERYGL 77
              + ++E +G+
Sbjct: 231 KPTLSLMEEFGI 242


>AY071481-1|AAL49103.1|  124|Drosophila melanogaster RE55111p
           protein.
          Length = 124

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 127 KGISYDNVIKVVERYGLXKNNESENSLEINQXLQK 23
           K IS DN+   VE++G  +N E+E  +   + LQK
Sbjct: 47  KEISADNISSAVEQFGNQRNKENELRVAKEKELQK 81


>AE014297-1787|AAF55011.1|  124|Drosophila melanogaster CG9922-PA
           protein.
          Length = 124

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 127 KGISYDNVIKVVERYGLXKNNESENSLEINQXLQK 23
           K IS DN+   VE++G  +N E+E  +   + LQK
Sbjct: 47  KEISADNISSAVEQFGNQRNKENELRVAKEKELQK 81


>AY070544-1|AAL48015.1|  388|Drosophila melanogaster LD25151p
           protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -1

Query: 551 GSETGGHMCH*CS*F-EKMGRSLSHK 477
           G+E GG++C  C  F EK GR + H+
Sbjct: 217 GTEKGGYICDVCGNFYEKRGRMMEHR 242


>AE014297-468|AAF54120.1|  388|Drosophila melanogaster CG10267-PA
           protein.
          Length = 388

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = -1

Query: 551 GSETGGHMCH*CS*F-EKMGRSLSHK 477
           G+E GG++C  C  F EK GR + H+
Sbjct: 217 GTEKGGYICDVCGNFYEKRGRMMEHR 242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,634,240
Number of Sequences: 53049
Number of extensions: 491104
Number of successful extensions: 999
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)