Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e17f
         (555 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2764| Best HMM Match : Phytochelatin (HMM E-Value=0)                28   4.5  
SB_2429| Best HMM Match : 7tm_1 (HMM E-Value=5.1e-08)                  27   7.8  

>SB_2764| Best HMM Match : Phytochelatin (HMM E-Value=0)
          Length = 413

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +2

Query: 212 KELDYIMGGAAAWEXVDST-DAXCPXCGYGRAYFXXLQTRSAD 337
           +EL  I+G   A   +  T D  CP CG+  + F   Q+  AD
Sbjct: 38  RELTQIVGDVIADPTLPRTEDHECPRCGHRESVFFQSQSSKAD 80


>SB_2429| Best HMM Match : 7tm_1 (HMM E-Value=5.1e-08)
          Length = 377

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 23  IIYEIFSWSLVSNYQFXNVYDXTILFYKLL 112
           II   F W+L  N  F + ++  +LFYK+L
Sbjct: 116 IICIFFLWTLSLNLLFFHGFEILLLFYKML 145


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,183,855
Number of Sequences: 59808
Number of extensions: 207420
Number of successful extensions: 265
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1288581898
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)