Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e17f
         (555 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical ...    91   5e-19
AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical ...    47   1e-05
Z54216-1|CAA90943.1|  308|Caenorhabditis elegans Hypothetical pr...    42   4e-04
Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical pr...    41   5e-04

>AC024214-2|AAF36076.1|  108|Caenorhabditis elegans Hypothetical
           protein Y77E11A.6 protein.
          Length = 108

 Score = 91.1 bits (216), Expect = 5e-19
 Identities = 35/62 (56%), Positives = 43/62 (69%)
 Frame = +2

Query: 212 KELDYIMGGAAAWEXVDSTDAXCPXCGYGRAYFXXLQTRSADEPMTTFYRCCNHXCAHNW 391
           K++D ++GG  AW     TD  CP C +GRAYF  LQTRSADEP T FYRC ++ CAH W
Sbjct: 47  KDIDDVLGGPGAWANAQVTDETCPVCSHGRAYFMQLQTRSADEPSTIFYRCADNACAHRW 106

Query: 392 RD 397
           +D
Sbjct: 107 KD 108


>AC024880-8|AAK85514.1|  167|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.5 protein.
          Length = 167

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +2

Query: 215 ELDYIMGGAAAWEXVDSTDAX-CPXCGYGRAYFXXLQTRSADEPMTTFYRCCNHXCAHNW 391
           EL  I+G       +  T+   CP CG  +A F   QT+ A+E M  +Y C +  C H W
Sbjct: 106 ELTQIVGDIIHDPTLPKTEEHQCPVCGKSKAVFFQAQTKKAEEEMRLYYVCASQDCQHRW 165

Query: 392 RD 397
            +
Sbjct: 166 TE 167


>Z54216-1|CAA90943.1|  308|Caenorhabditis elegans Hypothetical
           protein T24H10.1 protein.
          Length = 308

 Score = 41.5 bits (93), Expect = 4e-04
 Identities = 18/39 (46%), Positives = 22/39 (56%)
 Frame = +2

Query: 278 CPXCGYGRAYFXXLQTRSADEPMTTFYRCCNHXCAHNWR 394
           C  CG     +  LQTRS+DEPMTTF  C    C + W+
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFCLE--CGNRWK 306


>Z81035-6|CAB02739.1|  119|Caenorhabditis elegans Hypothetical
           protein C15H11.8 protein.
          Length = 119

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 16/32 (50%), Positives = 20/32 (62%)
 Frame = +2

Query: 269 DAXCPXCGYGRAYFXXLQTRSADEPMTTFYRC 364
           D  C  CG+ +A +  +QTRSADE  T FY C
Sbjct: 77  DHICTKCGHSKASYSTMQTRSADEGQTVFYTC 108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,982,977
Number of Sequences: 27780
Number of extensions: 161331
Number of successful extensions: 294
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)