Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e15r
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated prot... 32 2.4
BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated prot... 32 2.4
BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated prot... 31 3.1
AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated prot... 31 3.1
AB076348-1|BAD01535.1| 255|Homo sapiens keratin associated prot... 31 3.1
BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein. 31 5.4
AJ566387-1|CAD97467.1| 251|Homo sapiens keratin associated prot... 31 5.4
AB076358-1|BAD01545.1| 251|Homo sapiens keratin associated prot... 31 5.4
AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated prot... 31 5.4
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 27 6.0
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 27 6.0
BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated prot... 27 6.0
BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated prot... 27 6.0
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 27 6.0
AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated prot... 27 6.0
BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated prot... 27 6.0
AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated prot... 27 6.0
AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated prot... 27 6.0
BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated prot... 30 7.2
BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated prot... 30 7.2
BC033499-1|AAH33499.1| 613|Homo sapiens coiled-coil domain cont... 30 7.2
AK093365-1|BAC04145.1| 515|Homo sapiens ACT) mRNA. protein. 30 7.2
AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated prot... 30 7.2
X07994-1|CAA30801.1| 1927|Homo sapiens protein ( Human mRNA for ... 30 9.5
M61850-1|AAA59504.1| 1927|Homo sapiens lactase phlorizinhydrolas... 30 9.5
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 30 9.5
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 30 9.5
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 30 9.5
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 30 9.5
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 30 9.5
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 30 9.5
AC011893-3|AAX88924.1| 1927|Homo sapiens unknown protein. 30 9.5
>BC125049-1|AAI25050.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 31.9 bits (69), Expect = 2.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQ 662
C P +C S+P C V+C+ S C SG S C S S Q
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPC--QSGCTSSCTPSCCQQSSCQ 96
>BC125048-1|AAI25049.1| 401|Homo sapiens keratin associated protein
10-4 protein.
Length = 401
Score = 31.9 bits (69), Expect = 2.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQ 662
C P +C S+P C V+C+ S C SG S C S S Q
Sbjct: 57 CTPVSCVSSPCCPVTCEPSPC--QSGCTSSCTPSCCQQSSCQ 96
>BC131611-1|AAI31612.1| 298|Homo sapiens keratin associated protein
10-11 protein.
Length = 298
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQ 662
C P +C S+P C +C+ S C SG S C S S Q
Sbjct: 47 CTPVSCVSSPCCQAACEPSAC--QSGCTSSCTPSCCQQSSCQ 86
>AB076359-1|BAD01546.1| 298|Homo sapiens keratin associated protein
protein.
Length = 298
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQ 662
C P +C S+P C +C+ S C SG S C S S Q
Sbjct: 47 CTPVSCVSSPCCQAACEPSAC--QSGCTSSCTPSCCQQSSCQ 86
>AB076348-1|BAD01535.1| 255|Homo sapiens keratin associated protein
protein.
Length = 255
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQ 662
C P +C S+P C +C+ S C SG S C S S Q
Sbjct: 47 CTPVSCVSSPCCQAACEPSAC--QSGCTSSCTPSCCQQSSCQ 86
>BC133677-1|AAI33678.1| 194|Homo sapiens KRTAP10-3 protein protein.
Length = 194
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQ 662
C P +C S+P C +C+ S C SG S C S S Q
Sbjct: 47 CTPVSCVSSPCCQAACEPSPC--QSGCTSSCTPSCCQQSSCQ 86
>AJ566387-1|CAD97467.1| 251|Homo sapiens keratin associated protein
KAP10.10 protein.
Length = 251
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPC 629
C P +C S+P C +C+ S C SG S C
Sbjct: 42 CTPVSCVSSPCCQTACEPSAC--QSGYTSSC 70
>AB076358-1|BAD01545.1| 251|Homo sapiens keratin associated protein
protein.
Length = 251
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPC 629
C P +C S+P C +C+ S C SG S C
Sbjct: 42 CTPVSCVSSPCCQTACEPSAC--QSGYTSSC 70
>AB076350-1|BAD01537.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 30.7 bits (66), Expect = 5.4
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGSHIPSSDGQ 662
C P +C S+P C +C+ S C SG S C S S Q
Sbjct: 47 CTPVSCVSSPCCQAACEPSPC--QSGCTSSCTPSCCQQSSCQ 86
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.5 bits (58), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 TACSSTPWCSVSCQ*SGC 599
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 537 CRPTACSSTPW 569
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 27.5 bits (58), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 TACSSTPWCSVSCQ*SGC 599
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 537 CRPTACSSTPW 569
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.5 bits (58), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 TACSSTPWCSVSCQ*SGC 599
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 537 CRPTACSSTPW 569
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 27.5 bits (58), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 TACSSTPWCSVSCQ*SGC 599
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 537 CRPTACSSTPW 569
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 27.5 bits (58), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 TACSSTPWCSVSCQ*SGC 599
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 537 CRPTACSSTPW 569
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated protein
9.3 protein.
Length = 159
Score = 27.5 bits (58), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 TACSSTPWCSVSCQ*SGC 599
T CSSTP C SC S C
Sbjct: 25 TTCSSTPCCQPSCCVSSC 42
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 537 CRPTACSSTPW 569
C+PT C +T W
Sbjct: 9 CQPTCCRTTCW 19
>BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated protein
9-4 protein.
Length = 154
Score = 27.5 bits (58), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 TACSSTPWCSVSCQ*SGC 599
T CSSTP C SC S C
Sbjct: 30 TTCSSTPCCQPSCCVSSC 47
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 528 PVRCRPTACSSTPW 569
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated protein
9.9 protein.
Length = 154
Score = 27.5 bits (58), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 TACSSTPWCSVSCQ*SGC 599
T CSSTP C SC S C
Sbjct: 30 TTCSSTPCCQPSCCVSSC 47
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 528 PVRCRPTACSSTPW 569
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated protein
9.4 protein.
Length = 154
Score = 27.5 bits (58), Expect(2) = 6.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 546 TACSSTPWCSVSCQ*SGC 599
T CSSTP C SC S C
Sbjct: 30 TTCSSTPCCQPSCCVSSC 47
Score = 21.8 bits (44), Expect(2) = 6.0
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3
Query: 528 PVRCRPTACSSTPW 569
P CR T C +T W
Sbjct: 11 PTCCRTTCCRTTCW 24
>BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGS 638
C P +C S+P C +C+ S C SG S C S
Sbjct: 41 CTPVSCVSSPCCQAACEPSPC--QSGCTSSCTPS 72
>BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGS 638
C P +C S+P C +C+ S C SG S C S
Sbjct: 41 CTPVSCVSSPCCQAACEPSPC--QSGCTSSCTPS 72
>BC033499-1|AAH33499.1| 613|Homo sapiens coiled-coil domain
containing 116 protein.
Length = 613
Score = 30.3 bits (65), Expect = 7.2
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 534 RCRPTACSSTP--WCSVSCQ*SGC*LHSG*WSPCLGSHIPSSD 656
R RPT C+ P + S S S C HS + CLGSH SD
Sbjct: 137 RVRPTLCTGHPNNYPSSSSSMSNC--HSSLMAGCLGSHSRDSD 177
>AK093365-1|BAC04145.1| 515|Homo sapiens ACT) mRNA. protein.
Length = 515
Score = 30.3 bits (65), Expect = 7.2
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 534 RCRPTACSSTP--WCSVSCQ*SGC*LHSG*WSPCLGSHIPSSD 656
R RPT C+ P + S S S C HS + CLGSH SD
Sbjct: 137 RVRPTLCTGHPNNYPSSSSSMSNC--HSSLMAGCLGSHSRDSD 177
>AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated protein
protein.
Length = 271
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 537 CRPTACSSTPWCSVSCQ*SGC*LHSG*WSPCLGS 638
C P +C S+P C +C+ S C SG S C S
Sbjct: 41 CTPVSCVSSPCCQAACEPSPC--QSGCTSSCTPS 72
>X07994-1|CAA30801.1| 1927|Homo sapiens protein ( Human mRNA for
lactase-phlorizin hydrolase LPH (EC 3.2.1.23-62). ).
Length = 1927
Score = 29.9 bits (64), Expect = 9.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 505 WEVLSNNFLSVADPQLVAVLHGVPSLVNDQVVNYILDD 618
WE NF+S A P +LH + L+ DQ N++ D
Sbjct: 22 WES-DRNFISTAGPLTNDLLHNLSGLLGDQSSNFVAGD 58
>M61850-1|AAA59504.1| 1927|Homo sapiens lactase phlorizinhydrolase
protein.
Length = 1927
Score = 29.9 bits (64), Expect = 9.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 505 WEVLSNNFLSVADPQLVAVLHGVPSLVNDQVVNYILDD 618
WE NF+S A P +LH + L+ DQ N++ D
Sbjct: 22 WES-DRNFISTAGPLTNDLLHNLSGLLGDQSSNFVAGD 58
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -2
Query: 456 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKIHNTKYNQYLK 277
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 276 MSTTTCNCNSRDRVVYGGNSADSTREQW 193
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -2
Query: 456 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKIHNTKYNQYLK 277
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 276 MSTTTCNCNSRDRVVYGGNSADSTREQW 193
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -2
Query: 456 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKIHNTKYNQYLK 277
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 276 MSTTTCNCNSRDRVVYGGNSADSTREQW 193
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -2
Query: 456 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKIHNTKYNQYLK 277
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 276 MSTTTCNCNSRDRVVYGGNSADSTREQW 193
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -2
Query: 456 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKIHNTKYNQYLK 277
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 276 MSTTTCNCNSRDRVVYGGNSADSTREQW 193
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = -2
Query: 456 RNYNLALKLGSTTNPSNERIAYGDGVDKHTELVSWKFITLWENNRVYFKIHNTKYNQYLK 277
++ ++ L NP+ + I Y + + + E +W T+ + ++ F +NT+ N ++
Sbjct: 4167 KSTSVELSWSEPVNPNGKIIRY-EVIRRCFEGKAWGNQTIQADEKIVFTEYNTERNTFMY 4225
Query: 276 MSTTTCNCNSRDRVVYGGNSADSTREQW 193
T + +Y NSA T W
Sbjct: 4226 NDTGLQPWTQCEYKIYTWNSAGHTCSSW 4253
>AC011893-3|AAX88924.1| 1927|Homo sapiens unknown protein.
Length = 1927
Score = 29.9 bits (64), Expect = 9.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 505 WEVLSNNFLSVADPQLVAVLHGVPSLVNDQVVNYILDD 618
WE NF+S A P +LH + L+ DQ N++ D
Sbjct: 22 WES-DRNFISTAGPLTNDLLHNLSGLLGDQSSNFVAGD 58
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,990,027
Number of Sequences: 237096
Number of extensions: 2096181
Number of successful extensions: 4632
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4632
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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