Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e15f
         (565 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    29   3.3  
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros...    28   7.6  
BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p pro...    28   7.6  
AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA...    28   7.6  

>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
           protein.
          Length = 3539

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +3

Query: 69  ACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLS 182
           +CSP + ++     T  T+TS  N T  SS ATTTV S
Sbjct: 747 SCSPSSSSASTLLSTA-TRTSMSNSTCTSSAATTTVSS 783


>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 1059

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +2

Query: 365 YVKIIY--RNYNLALKLGSTTNPSNERI 442
           Y+KI+Y  R+Y   L  GST N  NE I
Sbjct: 15  YIKIVYKGRSYKCLLDTGSTINMINENI 42


>BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p
           protein.
          Length = 2727

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 454 WCRQAY*TRQLEVHYLVGEQQSVLQD 531
           W  Q+  T QL++H   G Q +VLQD
Sbjct: 810 WVLQSQKTNQLQIHNTEGHQVTVLQD 835


>AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA
           protein.
          Length = 2727

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 454 WCRQAY*TRQLEVHYLVGEQQSVLQD 531
           W  Q+  T QL++H   G Q +VLQD
Sbjct: 810 WVLQSQKTNQLQIHNTEGHQVTVLQD 835


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,623,909
Number of Sequences: 53049
Number of extensions: 554050
Number of successful extensions: 1632
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)