Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e11r
         (753 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated prot...    33   1.1  
BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated prot...    33   1.1  
BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.     33   1.1  
BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated prot...    33   1.1  
BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated prot...    33   1.1  
BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated prot...    33   1.1  
BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated prot...    33   1.1  
BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated prot...    33   1.1  
AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated prot...    33   1.1  
AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated prot...    33   1.1  
AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated prot...    33   1.1  
BC068223-1|AAH68223.1|  195|Homo sapiens SSH2 protein protein.         31   5.9  
BC011636-1|AAH11636.2|  178|Homo sapiens SSH2 protein protein.         31   5.9  
BC008941-1|AAH08941.1|  195|Homo sapiens SSH2 protein protein.         31   5.9  
AB072359-1|BAB84118.1|  195|Homo sapiens hSSH-2A protein.              31   5.9  
AB037805-1|BAA92622.1|  652|Homo sapiens KIAA1384 protein protein.     31   5.9  

>BC101555-1|AAI01556.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 45  CGFPSFSTSGTCSSSCCQPSC-CETSC 70



 Score = 32.7 bits (71), Expect = 1.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CGYP F  S T    CC   C C T+C
Sbjct: 9   CGYPSFSISGTCGSSCCQPSC-CETSC 34


>BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 45  CGFPSFSTSGTCSSSCCQPSC-CETSC 70


>BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.
          Length = 177

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 55  CGFPSFSTSGTCSSSCCQPSC-CETSC 80


>BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 45  CGFPSFSTSGTCSSSCCQPSC-CETSC 70


>BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 45  CGFPSFSTSGTCSSSCCQPSC-CETSC 70


>BC093841-1|AAH93841.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 45  CGFPSFSTSGTCSSSCCQPSC-CETSC 70



 Score = 32.7 bits (71), Expect = 1.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CGYP F  S T    CC   C C T+C
Sbjct: 9   CGYPSFSISGTCGSSCCQPSC-CETSC 34


>BC069533-1|AAH69533.1|  174|Homo sapiens keratin associated protein
           1-5 protein.
          Length = 174

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 45  CGFPSFSTSGTCSSSCCQPSC-CETSC 70



 Score = 32.7 bits (71), Expect = 1.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CGYP F  S T    CC   C C T+C
Sbjct: 9   CGYPSFSISGTCGSSCCQPSC-CETSC 34


>BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 45  CGFPSFSTSGTCSSSCCQPSC-CETSC 70


>AJ406928-1|CAC27567.1|  174|Homo sapiens keratin associated protein
           1.5 protein.
          Length = 174

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 45  CGFPSFSTSGTCSSSCCQPSC-CETSC 70



 Score = 32.7 bits (71), Expect = 1.5
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CGYP F  S T    CC   C C T+C
Sbjct: 9   CGYPSFSISGTCGSSCCQPSC-CETSC 34


>AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated protein
           1.3 protein.
          Length = 167

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 45  CGFPSFSTSGTCSSSCCQPSC-CETSC 70


>AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated protein
           1.8 protein.
          Length = 177

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 134 CGYPRFQAS*TVSKPCCIHGCRCRTNC 214
           CG+P F  S T S  CC   C C T+C
Sbjct: 55  CGFPSFSTSGTCSSSCCQPSC-CETSC 80


>BC068223-1|AAH68223.1|  195|Homo sapiens SSH2 protein protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +3

Query: 231 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 365
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 139 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 180


>BC011636-1|AAH11636.2|  178|Homo sapiens SSH2 protein protein.
          Length = 178

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +3

Query: 231 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 365
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 122 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 163


>BC008941-1|AAH08941.1|  195|Homo sapiens SSH2 protein protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +3

Query: 231 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 365
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 139 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 180


>AB072359-1|BAB84118.1|  195|Homo sapiens hSSH-2A protein.
          Length = 195

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/45 (40%), Positives = 27/45 (60%)
 Frame = +3

Query: 231 GLQVPLGSETIDAVDSEGHVVAVRVSTDSQYQILVTLSVQDLEVD 365
           GL +PL S+T+  +D +G      VSTD++  I   +SVQ + VD
Sbjct: 139 GLVLPLWSDTLIHLDGDG---GFSVSTDNRVHIFKPVSVQAMWVD 180


>AB037805-1|BAA92622.1|  652|Homo sapiens KIAA1384 protein protein.
          Length = 652

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
 Frame = -2

Query: 407 KVSWKFIALWENNKVYFKILNTERNQYLVLGVGT-NPNGDHMAFGVNSVDSFRAQWYLQP 231
           K +WK + +   N  +  ++  E   +++ G    NPNG H    V+  D     W   P
Sbjct: 373 KKTWKILTIMPYNSAHHCVVEVENFLFVLGGEDQWNPNGKHSTNFVSRYDPRFNSWIQLP 432

Query: 230 AKYDKDNLFY 201
              ++   FY
Sbjct: 433 PMQERRASFY 442


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,247,873
Number of Sequences: 237096
Number of extensions: 2096368
Number of successful extensions: 5044
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5043
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)