Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e08r
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    24   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.5  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   4.6  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   4.6  

>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 687 NTYKCTKILKMKFGLIVVFVLL 622
           N  KC+++ K + G I+ FVLL
Sbjct: 84  NCSKCSEVQKKQAGKILTFVLL 105


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 190 QSQIHVTMLSK--GVFLHQVSFKSIFTYRLKHL*LFSFFFYFVMSSTSY*HKFT 345
           ++ + +T+L K  G+    +S    F  R   L  +S+FFY     T+Y  K +
Sbjct: 50  KTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLS 103


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +1

Query: 190 QSQIHVTMLSK--GVFLHQVSFKSIFTYRLKHL*LFSFFFYFVMSSTSY*HKFT 345
           ++ + +T+L K  G+    +S    F  R   L  +S+FFY     T+Y  K +
Sbjct: 6   KTPLPLTLLYKLLGIIQFPISAHFSFMSRFLCLPFYSYFFYLSYIYTTYSRKLS 59


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -1

Query: 134 WNFECMRLSYRGYRYVWYCSLVE 66
           WN +  R++   ++ +WY  L++
Sbjct: 289 WNCQNTRVASEDFKAIWYSILIK 311


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 260 NIDLNETW*RNTPLDNIVTCICD 192
           NIDLN+    +  L N V C+ D
Sbjct: 28  NIDLNQILKSDRLLKNYVNCLLD 50


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -1

Query: 260 NIDLNETW*RNTPLDNIVTCICD 192
           NIDLN+    +  L N V C+ D
Sbjct: 28  NIDLNQILKSDRLLKNYVNCLLD 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,579
Number of Sequences: 336
Number of extensions: 4028
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)