Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e07r
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.29 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.89 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 608 CYFLNFCIHYINSSHY*IVNAYLFLIANYFF*KTGLIF 721
           C F+ F +H++  ++Y    A++ L+  Y+F    +IF
Sbjct: 87  CPFIIFTVHFLLCTYY-FYYAFIILLCVYYFYYAFIIF 123


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 57  LKLYIHNIIVSTLRTIKT*CDTCFLTNYHIINT 155
           L +YI  I++ T  TI+T   +     +HI+ T
Sbjct: 227 LLIYIQVIVIGTKNTIETVAYSVIFILWHIVGT 259


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 563 EIFIHIKLLFFKAHCLNCF 507
           EI I I L+FFK   L CF
Sbjct: 60  EIHIKIVLMFFKEASLYCF 78


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 208 LLNQSLINITNCDDN 252
           L+ QS+ NIT+ DD+
Sbjct: 143 LMGQSIFNITSPDDH 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,186
Number of Sequences: 336
Number of extensions: 3089
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)