Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e07r
         (773 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0179 - 1319291-1319332,1319884-1320579,1322759-1323207,132...    30   2.3  
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141...    30   2.3  

>12_01_0179 -
           1319291-1319332,1319884-1320579,1322759-1323207,
           1323291-1324903,1324991-1325077,1326983-1327251
          Length = 1051

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 768 HPLRMLLCAYLFSFLIKISPVF 703
           H  R++LC  LF+FL+  SPVF
Sbjct: 114 HIKRLMLCPSLFNFLLSSSPVF 135


>11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,
            1414639-1414725,1416244-1416411,1416785-1416958,
            1417662-1417720,1418132-1420154,1420549-1420647,
            1420998-1421796,1422101-1422120,1422446-1422513
          Length = 1827

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 768  HPLRMLLCAYLFSFLIKISPVF 703
            H  R++LC  LF+FL+  SPVF
Sbjct: 1161 HIKRLMLCPSLFNFLLSSSPVF 1182


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,497,909
Number of Sequences: 37544
Number of extensions: 199323
Number of successful extensions: 245
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)