Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e07f
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synapti... 76 2e-14
AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform... 76 2e-14
AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform... 76 2e-14
AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isofo... 76 2e-14
U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synapti... 67 8e-12
U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synapti... 67 8e-12
AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein. 67 8e-12
U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 31 0.65
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 1.1
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical p... 29 2.0
AF098995-3|AAC67483.1| 276|Caenorhabditis elegans F-box b prote... 29 2.0
Z81073-8|CAN86905.1| 271|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81073-7|CAB03032.2| 248|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82271-5|CAI46599.1| 378|Caenorhabditis elegans Hypothetical pr... 29 3.5
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 29 3.5
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 4.6
U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical... 28 4.6
AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical... 28 4.6
AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical... 28 4.6
AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gam... 28 4.6
AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gam... 28 4.6
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 28 4.6
Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical pr... 28 6.1
U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical pr... 28 6.1
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 28 6.1
AL032653-3|CAA21713.1| 861|Caenorhabditis elegans Hypothetical ... 28 6.1
AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical ... 28 6.1
AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical ... 28 6.1
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 27 8.1
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 27 8.1
>U88174-1|ABP57823.1| 1124|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform a protein.
Length = 1124
Score = 75.8 bits (178), Expect = 2e-14
Identities = 42/146 (28%), Positives = 74/146 (50%)
Frame = +1
Query: 148 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 327
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 328 ESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAK 507
E ++ + F+ G LI+ C +S+HLW +K+ E+ H + + +S I + + K
Sbjct: 88 EPVL-HMQFLVNEGGLITSCGTDSIHLWNYRQKT-AEI-VHTVQLSKESVSCIHLPVAGK 144
Query: 508 NALLGTEGGNIYSLDLSAFTISEDVI 585
+GT+ GN+Y L L++F +S VI
Sbjct: 145 WLFIGTDKGNVYFLCLNSFLLSPYVI 170
>AY997306-1|AAY44303.1| 1133|Caenorhabditis elegans TOM-1 isoform E
protein.
Length = 1133
Score = 75.8 bits (178), Expect = 2e-14
Identities = 42/146 (28%), Positives = 74/146 (50%)
Frame = +1
Query: 148 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 327
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 328 ESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAK 507
E ++ + F+ G LI+ C +S+HLW +K+ E+ H + + +S I + + K
Sbjct: 88 EPVL-HMQFLVNEGGLITSCGTDSIHLWNYRQKT-AEI-VHTVQLSKESVSCIHLPVAGK 144
Query: 508 NALLGTEGGNIYSLDLSAFTISEDVI 585
+GT+ GN+Y L L++F +S VI
Sbjct: 145 WLFIGTDKGNVYFLCLNSFLLSPYVI 170
>AY997305-1|AAY44302.1| 1128|Caenorhabditis elegans TOM-1 isoform D
protein.
Length = 1128
Score = 75.8 bits (178), Expect = 2e-14
Identities = 42/146 (28%), Positives = 74/146 (50%)
Frame = +1
Query: 148 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 327
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 328 ESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAK 507
E ++ + F+ G LI+ C +S+HLW +K+ E+ H + + +S I + + K
Sbjct: 88 EPVL-HMQFLVNEGGLITSCGTDSIHLWNYRQKT-AEI-VHTVQLSKESVSCIHLPVAGK 144
Query: 508 NALLGTEGGNIYSLDLSAFTISEDVI 585
+GT+ GN+Y L L++F +S VI
Sbjct: 145 WLFIGTDKGNVYFLCLNSFLLSPYVI 170
>AY912102-1|AAX89145.1| 1124|Caenorhabditis elegans tomosyn isoform
A protein.
Length = 1124
Score = 75.8 bits (178), Expect = 2e-14
Identities = 42/146 (28%), Positives = 74/146 (50%)
Frame = +1
Query: 148 QKLQNELFAFRKTVQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNY 327
+K+Q+E F + V+HG P A+DP ++ G GV+ +H +
Sbjct: 28 EKIQSEHCRFTRVVRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESG 87
Query: 328 ESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAK 507
E ++ + F+ G LI+ C +S+HLW +K+ E+ H + + +S I + + K
Sbjct: 88 EPVL-HMQFLVNEGGLITSCGTDSIHLWNYRQKT-AEI-VHTVQLSKESVSCIHLPVAGK 144
Query: 508 NALLGTEGGNIYSLDLSAFTISEDVI 585
+GT+ GN+Y L L++F +S VI
Sbjct: 145 WLFIGTDKGNVYFLCLNSFLLSPYVI 170
>U88174-3|ABP57824.1| 1058|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform d protein.
Length = 1058
Score = 67.3 bits (157), Expect = 8e-12
Identities = 38/133 (28%), Positives = 66/133 (49%)
Frame = +1
Query: 187 VQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNYESIVTQIHFITGT 366
V+HG P A+DP ++ G GV+ +H + E ++ + F+
Sbjct: 6 VRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESGEPVL-HMQFLVNE 64
Query: 367 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 546
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 65 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 122
Query: 547 LDLSAFTISEDVI 585
L L++F +S VI
Sbjct: 123 LCLNSFLLSPYVI 135
>U88174-2|AAP68903.1| 1211|Caenorhabditis elegans Tomosyn synaptic
protein protein1, isoform c protein.
Length = 1211
Score = 67.3 bits (157), Expect = 8e-12
Identities = 38/133 (28%), Positives = 66/133 (49%)
Frame = +1
Query: 187 VQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNYESIVTQIHFITGT 366
V+HG P A+DP ++ G GV+ +H + E ++ + F+
Sbjct: 6 VRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESGEPVL-HMQFLVNE 64
Query: 367 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 546
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 65 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 122
Query: 547 LDLSAFTISEDVI 585
L L++F +S VI
Sbjct: 123 LCLNSFLLSPYVI 135
>AY912103-1|AAX89146.1| 1058|Caenorhabditis elegans tomosyn protein.
Length = 1058
Score = 67.3 bits (157), Expect = 8e-12
Identities = 38/133 (28%), Positives = 66/133 (49%)
Frame = +1
Query: 187 VQHGFPHRASALAWDPXXXXXXXXXXXXXXKVYGRPGVELYGQHTNYESIVTQIHFITGT 366
V+HG P A+DP ++ G GV+ +H + E ++ + F+
Sbjct: 6 VRHGLPEDPRCFAYDPVQRLIAIGTGRGHIRIIGDAGVDYLLKHESGEPVL-HMQFLVNE 64
Query: 367 GRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNIYS 546
G LI+ C +S+HLW +K+ E+ H + + +S I + + K +GT+ GN+Y
Sbjct: 65 GGLITSCGTDSIHLWNYRQKT-AEIV-HTVQLSKESVSCIHLPVAGKWLFIGTDKGNVYF 122
Query: 547 LDLSAFTISEDVI 585
L L++F +S VI
Sbjct: 123 LCLNSFLLSPYVI 135
>U47144-5|AAB52621.2| 1410|Caenorhabditis elegans Hypothetical
protein ZC53.4 protein.
Length = 1410
Score = 32.7 bits (71), Expect = 0.21
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 304 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNK 471
L Q+ YE+++TQ + T L+ D+N + E+NE S E++ +FE NK
Sbjct: 693 LASQNDEYETLLTQEAYTMYT--LLKHSDENVKSIDELNEMSRDEVRKELFEMNNK 746
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 31.1 bits (67), Expect = 0.65
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 325 YESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVE 438
+E V + F+TG GR++S DD S+ +W+I + +E
Sbjct: 276 HEKGVNCVEFLTG-GRIVSGSDDCSICVWDIQTQKCIE 312
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 182 RQSSMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTP 322
RQS R+ R+ SS SR PPP R R ++Q + +P
Sbjct: 491 RQSPQRRRSPRRRRSPSSSSRSRSPPPPPRRPRQDSEQQAPVAVKSP 537
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +2
Query: 125 ASSPLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASN 304
AS RGR+ + S AS R SRG R +++ RL + ST+ + S
Sbjct: 61 ASKSATRGRTASKTPKTPSKTPSSASARSRSRSRG-RPTNASRLSASTPSASSTSVKRSR 119
Query: 305 STANTP 322
S TP
Sbjct: 120 SVTKTP 125
>Z27079-12|CAD44154.1| 92|Caenorhabditis elegans Hypothetical
protein T05G5.12 protein.
Length = 92
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 206 TERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITNR*SHRYISSQ 361
+E+Q++ + +P +++R ++ ++ STA+T T S RY SSQ
Sbjct: 20 SEKQNTFNYQKLSESETMPVHQKTRKGSNHSNASTASTCSTTSSSKRYTSSQ 71
>AF098995-3|AAC67483.1| 276|Caenorhabditis elegans F-box b protein
protein 17 protein.
Length = 276
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 373 LISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTE 528
L + C + +H +++++L H G N + +ICV S + G E
Sbjct: 204 LTTNCTNLEIHYQSLSDRNLNLFMKHWIRGSNPNLQSICVNFSREMRSFGAE 255
>Z81073-8|CAN86905.1| 271|Caenorhabditis elegans Hypothetical
protein F30F8.5b protein.
Length = 271
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 122 RASSPLLRGRSCRMNYLHSERQS-SMASRTERQHSRGIRSSDSRR-LVPPPERSRSTADQ 295
RA SP + + + E+Q+ ++ + + +S R +DS + L PPP+R R T+
Sbjct: 22 RAHSPEIDVEVIKSDCSTPEKQNGAVGNEQQMNNSTSTRRTDSNKNLSPPPQRLR-TSSS 80
Query: 296 ASNSTAN 316
S+ T N
Sbjct: 81 TSDGTEN 87
>Z81073-7|CAB03032.2| 248|Caenorhabditis elegans Hypothetical
protein F30F8.5a protein.
Length = 248
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 122 RASSPLLRGRSCRMNYLHSERQS-SMASRTERQHSRGIRSSDSRR-LVPPPERSRSTADQ 295
RA SP + + + E+Q+ ++ + + +S R +DS + L PPP+R R T+
Sbjct: 22 RAHSPEIDVEVIKSDCSTPEKQNGAVGNEQQMNNSTSTRRTDSNKNLSPPPQRLR-TSSS 80
Query: 296 ASNSTAN 316
S+ T N
Sbjct: 81 TSDGTEN 87
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 361 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 531
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1515 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1568
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 361 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 531
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1540 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1593
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical protein
T01G1.1c protein.
Length = 1580
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 361 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 531
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1515 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1568
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical protein
T01G1.1a protein.
Length = 1605
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 361 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 531
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1540 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1593
>Z82271-5|CAI46599.1| 378|Caenorhabditis elegans Hypothetical
protein T01G1.1b protein.
Length = 378
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 361 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 531
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 313 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 366
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 361 GTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEG 531
G L+S C D ++ W++ S ++L + + I+ +C S K+ L G
Sbjct: 1544 GKELLVSACKDGTIRFWDVGSSSRMKLVEEYSKAHQEGINDMC---STKSMLFTASG 1597
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 182 RQSSMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITN 331
RQS A R +R+ S G + VPPPE S + ++S N T+
Sbjct: 16 RQSPAAVRFQRKVSTGSAPTVPPPAVPPPESSADEEEPRASSNNNYSSTS 65
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 182 RQSSMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITN 331
RQS A R +R+ S G + VPPPE S + ++S N T+
Sbjct: 16 RQSPAAVRFQRKVSTGSAPTVPPPAVPPPESSADEEEPRASSNNNYSSTS 65
>U80438-1|AAB37631.1| 400|Caenorhabditis elegans Hypothetical
protein T19B4.5 protein.
Length = 400
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 134 PLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPE 271
P LRG ++ + RQS+ A + +Q S+ IR R + P P+
Sbjct: 48 PQLRGNPMHHHH-YDNRQSAPAYQVPQQQSQSIRRGVGRPMAPRPQ 92
>AL031633-14|CAA21032.1| 903|Caenorhabditis elegans Hypothetical
protein Y39A1A.15c protein.
Length = 903
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 191 SMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITNR 334
S ++R H RG + PP SR+ ++++ ++ TP NR
Sbjct: 248 SNSTRRNTVHHRGEHPQQQQYQQQPPSSSRTASERSMSAMLGTPYGNR 295
>AL031633-13|CAA21027.1| 951|Caenorhabditis elegans Hypothetical
protein Y39A1A.15b protein.
Length = 951
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 191 SMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITNR 334
S ++R H RG + PP SR+ ++++ ++ TP NR
Sbjct: 296 SNSTRRNTVHHRGEHPQQQQYQQQPPSSSRTASERSMSAMLGTPYGNR 343
>AL031633-12|CAA21026.2| 1107|Caenorhabditis elegans Hypothetical
protein Y39A1A.15a protein.
Length = 1107
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 191 SMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITNR 334
S ++R H RG + PP SR+ ++++ ++ TP NR
Sbjct: 452 SNSTRRNTVHHRGEHPQQQQYQQQPPSSSRTASERSMSAMLGTPYGNR 499
>AJ132701-1|CAA10737.1| 1107|Caenorhabditis elegans centaurin gamma
1B protein.
Length = 1107
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 191 SMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITNR 334
S ++R H RG + PP SR+ ++++ ++ TP NR
Sbjct: 452 SNSTRRNTVHHRGEHPQQQQYQQQPPSSSRTASERSMSAMLGTPYGNR 499
>AJ132700-1|CAA10736.1| 952|Caenorhabditis elegans centaurin gamma
1A protein.
Length = 952
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 191 SMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITNR 334
S ++R H RG + PP SR+ ++++ ++ TP NR
Sbjct: 296 SNSTRRNTVHHRGEHPQQQQYQQQPPSSSRTASERSMSAMLGTPYGNR 343
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/97 (22%), Positives = 40/97 (41%)
Frame = +1
Query: 277 KVYGRPGVELYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVF 456
+++G+P + ++ V + F L+S DD + +W NE EL S
Sbjct: 190 ELFGQPDAVVKHVLEGHDRGVNWVAFHHTNPILVSGSDDRQVKIWRYNETKAWELDS--C 247
Query: 457 EGKNKKISAICVESSAKNALLGTEGGNIYSLDLSAFT 567
G +S++ +A L +E +I D+ T
Sbjct: 248 RGHYNNVSSVIFHPNADLILSNSEDKSIRVWDMQKRT 284
>Z82080-4|CAC70117.1| 1125|Caenorhabditis elegans Hypothetical
protein W09G3.6 protein.
Length = 1125
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 469 KKISAICVESSAKNALLGTEGGNIY 543
K++ CV S++K+ LGT G++Y
Sbjct: 44 KRVKYTCVASTSKSLCLGTSTGSVY 68
>U23516-9|AAG38884.1| 1203|Caenorhabditis elegans Hypothetical protein
B0416.1 protein.
Length = 1203
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/60 (28%), Positives = 24/60 (40%)
Frame = +2
Query: 176 SERQSSMASRTERQHSRGIRSSDSRRLVPPPERSRSTADQASNSTANTPITNR*SHRYIS 355
S+ + S S + + I+S D S+ST SNS IT H YI+
Sbjct: 954 SDDEDSEKSNRDMSYRTAIQSFDQNSQSASASSSKSTTTAPSNSEMRIEITENPLHTYIT 1013
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/76 (23%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +1
Query: 304 LYGQHTNYESIVTQIHFITGTGRLISLCDDNSLHLWEINEKS----LVELKSHVFEGKNK 471
++ H + ES VTQ+ F+ G +IS D+ + W I +S +++ ++ ++
Sbjct: 138 MFRLHGHKES-VTQMKFVRGDRFIISTSKDSLIKFWSIASQSCFYTVMDSRNEIYSMSLH 196
Query: 472 KISAICVESSAKNALL 519
+ + V ++A+ LL
Sbjct: 197 RDETVLVAATAELELL 212
>AL032653-3|CAA21713.1| 861|Caenorhabditis elegans Hypothetical
protein Y54E5B.2 protein.
Length = 861
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 355 ITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVE 495
+T + R+ ++ DD ++ +W I+++ L + VF G + AICV+
Sbjct: 147 VTDSTRIFTISDDRTIRMWPIDDRESGPLCT-VF-GHTARPFAICVD 191
>AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical
protein Y45F10D.7 protein.
Length = 893
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 301 ELYGQHTNYESI-VTQIHFITGTGRLISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKI 477
EL G+ T S + ++F+ G ++S DNSL LW + + + EG +K
Sbjct: 264 ELIGKITGIHSDEINCLYFVPGEPIMLSASLDNSLRLWIFDSADGMPRELVRLEGHSKPC 323
Query: 478 SAI 486
++I
Sbjct: 324 ASI 326
>AC006645-6|AAF39847.1| 462|Caenorhabditis elegans Hypothetical
protein F56A4.9 protein.
Length = 462
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 340 TQIHFITGTGRLISLCDDNS-LHLWEINEKSLVELKSHVFEG 462
+ I+F+ T RL++L + L W+I + +L E+K ++F+G
Sbjct: 155 SNIYFLRNTVRLLNLPNLKVILKNWKIAQCTLCEMKKNIFKG 196
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +1
Query: 373 LISLCDDNSLHLWEINEKSLVELKSHVFEGKNKKISAICVESSAKNALLGTEGGNI 540
+IS DD+ + +W+ K+ V+ +G + +S++C + G+E +
Sbjct: 202 IISGADDHLVKIWDYQNKTCVQ----TLDGHAQNVSSVCFHPELPLIITGSEDSTV 253
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/56 (37%), Positives = 24/56 (42%)
Frame = +2
Query: 116 AARASSPLLRGRSCRMNYLHSERQSSMASRTERQHSRGIRSSDSRRLVPPPERSRS 283
A R S L R S HS R S + R +HSR S R+ P RSRS
Sbjct: 312 ARRRSRHLSRSGSRTPAQRHSRRSESTSRRRSGRHSRSRSRSPPRK--RPVRRSRS 365
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,872,367
Number of Sequences: 27780
Number of extensions: 277607
Number of successful extensions: 925
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -