Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11e06r
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    24   1.2  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.2  

>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 18/75 (24%), Positives = 36/75 (48%)
 Frame = -2

Query: 482 AIATSFSPDANTKNINSNNNGQDGTKCIVTVITKTAKEYMTTIPCSVLLNTAAENNVTEA 303
           A   S+SPD   KN+  N++      C V V  + A+ +  ++  S + N     N+ + 
Sbjct: 14  AFTASWSPDTLAKNLGINSSFVHKEHCYVLV--RLAR-FRDSVKLSKIPNNV---NLMDV 67

Query: 302 PIVENEKVEIDTINS 258
              E +K+++  ++S
Sbjct: 68  VAREFDKIQVGDVSS 82


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 225 LVWVI*KRACGAVYSINLDFLVFDYRCLSNIIFCCRI 335
           LV+ I   AC ++   N+    F Y CL  I   C I
Sbjct: 166 LVYFILAFACISIAYTNVSTDAFFYTCLIQIETQCEI 202


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,797
Number of Sequences: 336
Number of extensions: 3686
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)