Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e06r
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 31 0.90
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 30 1.6
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 30 2.1
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 30 2.1
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 30 2.1
AF003137-7|AAN84856.1| 433|Caenorhabditis elegans Hypothetical ... 30 2.1
AF003137-6|AAB93644.1| 497|Caenorhabditis elegans Hypothetical ... 30 2.1
AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical ... 29 2.8
AC024821-4|AAF60787.1| 300|Caenorhabditis elegans Hypothetical ... 29 2.8
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 29 3.6
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical pr... 29 4.8
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL021503-7|CAI79271.1| 277|Caenorhabditis elegans Hypothetical ... 29 4.8
AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical ... 29 4.8
Z70038-3|CAA93883.2| 541|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z81125-2|CAD56600.1| 507|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z81125-1|CAB03382.1| 501|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z70754-5|CAA94775.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.4
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 359 TIPCSVLLNTAAENNVTEAPIVENEKVEIDTINSTTSPFSDDPN 228
T P ++ + AEN V E P V + ++ +T T S DD N
Sbjct: 666 TDPTTLTCSMEAENEVCETPAVVSVEIRDETNGETNSDLKDDEN 709
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.6
Identities = 28/102 (27%), Positives = 35/102 (34%), Gaps = 6/102 (5%)
Frame = -2
Query: 398 VTVITKTAKEYMTTIPCSVLLNTAAENNV------TEAPIVENEKVEIDTINSTTSPFSD 237
V T T T C+ T V T+ P V K + +PF D
Sbjct: 33 VDPFTMTIASGFQTTQCTTCSETKTSQRVNPLKTTTKTPAVTTTKSIVPLQCQKFTPFKD 92
Query: 236 DPNQAVALKLTTEGNYGGISQNNLNCTPEHGSIRDPINPCFA 111
N A TT N G S+ ++ CT G D I C A
Sbjct: 93 PMNAAAKCTATTGMNSAGCSKLSVKCTINPGFECD-ITKCMA 133
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 359 TIPCSVLLNTAAENNVTEAPIVENEKVEIDTINSTTSPFSDDPN 228
T P + + AEN V E P V + ++ +T T S DD N
Sbjct: 151 TDPTTPTCSMEAENEVCETPAVVSVEIRDETNGETNSDLKDDEN 194
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 359 TIPCSVLLNTAAENNVTEAPIVENEKVEIDTINSTTSPFSDDPN 228
T P + + AEN V E P V + ++ +T T S DD N
Sbjct: 663 TDPTTPTCSMEAENEVCETPAVVSVEIRDETNGETNSDLKDDEN 706
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 359 TIPCSVLLNTAAENNVTEAPIVENEKVEIDTINSTTSPFSDDPN 228
T P + + AEN V E P V + ++ +T T S DD N
Sbjct: 666 TDPTTPTCSMEAENEVCETPAVVSVEIRDETNGETNSDLKDDEN 709
>AF003137-7|AAN84856.1| 433|Caenorhabditis elegans Hypothetical
protein C27A12.7b protein.
Length = 433
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 642 ISSRSSQVPEC*SSKKSSYPGSCNPXTCKRTSC 740
I+S + + P+C ++ + + G CN TCK T C
Sbjct: 214 INSNTKECPKCMATIEKN--GGCNQITCKNTGC 244
>AF003137-6|AAB93644.1| 497|Caenorhabditis elegans Hypothetical
protein C27A12.7a protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 642 ISSRSSQVPEC*SSKKSSYPGSCNPXTCKRTSC 740
I+S + + P+C ++ + + G CN TCK T C
Sbjct: 278 INSNTKECPKCMATIEKN--GGCNQITCKNTGC 308
>AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical
protein Y54F10BM.6 protein.
Length = 280
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 242 SDDPNQAVALKLTTEGNYGGISQNNLNCTPEHGSIRDPINPCFAVN 105
SD + + LT EG GGI++N P + +IRD + F++N
Sbjct: 179 SDFTQKKRVVCLTCEGRSGGITENWKPHVPINYAIRDLLKDSFSIN 224
>AC024821-4|AAF60787.1| 300|Caenorhabditis elegans Hypothetical
protein Y55B1AR.3 protein.
Length = 300
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -2
Query: 308 EAPIVENEKVEIDTINSTTSPFSDDPNQAVALKLTTEGNYGGISQNNLNCTPEHGSIR 135
+ P + +K E NST+ P DD + +++ G+ I ++LN P+ S +
Sbjct: 42 KGPKIGIKKTEGSAPNSTSDPTGDDKTRIKEIRIHQRGDQWIIDMDSLNVKPDSCSTK 99
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = -2
Query: 491 IPCAIATSFSPDANTKNINSNNNGQDGTKCIVTVITKTAKEYMTTIPCSVLLNTAAENNV 312
IP AT SPD+ ++ SNN+ D + IT M + ++ AA+ V
Sbjct: 844 IPSCFATPDSPDSQLQSFVSNNSDLDADTSVNLSITTDGVHLM------MCVDKAAQGVV 897
Query: 311 TEAPIVENEKVEIDTINSTTSPF 243
EA V + I+ + F
Sbjct: 898 VEATHVGESENTIEVVEDAEKSF 920
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = -2
Query: 491 IPCAIATSFSPDANTKNINSNNNGQDGTKCIVTVITKTAKEYMTTIPCSVLLNTAAENNV 312
IP AT SPD+ ++ SNN+ D + IT M + ++ AA+ V
Sbjct: 844 IPSCFATPDSPDSQLQSFVSNNSDLDADTSVNLSITTDGVHLM------MCVDKAAQGVV 897
Query: 311 TEAPIVENEKVEIDTINSTTSPF 243
EA V + I+ + F
Sbjct: 898 VEATHVGESENTIEVVEDAEKSF 920
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.8
Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 1/155 (0%)
Frame = -2
Query: 551 SDLVNCTLTISGEKATEVLAIPCAIATSFSPDANTKNINSNNNGQDGTKCIVTVITKTAK 372
S+ +C +S +ATE CA T+ S K++N + + V + K
Sbjct: 22 SNRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVNIRDLVKYRALEFVGCQDRLLK 81
Query: 371 EYMTTIPCSVLLNTAAENNVTEAPIVENEKVEIDTINSTTSPFSDDPNQAVALKLTTEGN 192
E + +L+N A + P E P S + ++ AL+ E
Sbjct: 82 EVVDFESLQILVNEDARECFEKLPESSKRVEEFTDSCDYVQPVSRNASKGDALQCLIEFK 141
Query: 191 YG-GISQNNLNCTPEHGSIRDPINPCFAVNQNLTV 90
++ L C P+H + +N QN V
Sbjct: 142 QDREYCESLLECCPDHTRCGERMNAVSLSYQNARV 176
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 28.7 bits (61), Expect = 4.8
Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 1/155 (0%)
Frame = -2
Query: 551 SDLVNCTLTISGEKATEVLAIPCAIATSFSPDANTKNINSNNNGQDGTKCIVTVITKTAK 372
S+ +C +S +ATE CA T+ S K++N + + V + K
Sbjct: 22 SNRTSCFHYVSCLEATEANLKQCAGGTAISLTLEAKDVNIRDLVKYRALEFVGCQDRLLK 81
Query: 371 EYMTTIPCSVLLNTAAENNVTEAPIVENEKVEIDTINSTTSPFSDDPNQAVALKLTTEGN 192
E + +L+N A + P E P S + ++ AL+ E
Sbjct: 82 EVVDFESLQILVNEDARECFEKLPESSKRVEEFTDSCDYVQPVSRNASKGDALQCLIEFK 141
Query: 191 YG-GISQNNLNCTPEHGSIRDPINPCFAVNQNLTV 90
++ L C P+H + +N QN V
Sbjct: 142 QDREYCESLLECCPDHTRCGERMNAVSLSYQNARV 176
>Z49069-1|CAA88864.1| 1696|Caenorhabditis elegans Hypothetical protein
K12D12.2 protein.
Length = 1696
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = -2
Query: 554 LSDLVNCTLTISGEKATEVLAIPCAIATSFSPD-ANTKNINSNNNGQDGTKCIVTVITK- 381
LSD ++C +T +G + T+ I C +F P A+TK + ++ G ++ +I +
Sbjct: 966 LSDAIDCQVTRTGNRLTDTNNI-CYYLLAFRPSKAHTKELYQADDVLTGLHYVLYIIEQF 1024
Query: 380 TAKEYMTTIPCSVLLNTA 327
+ +P S LL A
Sbjct: 1025 VMSKKPFDLPFSALLEPA 1042
>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical protein
W03A3.2 protein.
Length = 1540
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -2
Query: 446 KNINSNNNGQDGTKCIVTVITKTAKEYMTTIPCS-VLLNTAAENNVTEAPIVENEKVEID 270
++INSN + + VT TK+AKE I + + +T +P++++ K+EI+
Sbjct: 907 ESINSNASDNNSFDVFVTPPTKSAKEEKRRIAVKHPRVGNIIYSPLTSSPVIKHPKLEIN 966
>AL021503-7|CAI79271.1| 277|Caenorhabditis elegans Hypothetical
protein Y68A4A.10b protein.
Length = 277
Score = 28.7 bits (61), Expect = 4.8
Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Frame = -2
Query: 386 TKTAKEYMTTIPCSVLLNTAAE----NNVTEAPIVENEKVEIDTINSTTSPFSDDPNQAV 219
T T + T C+ T T+AP + V + T PF D N A
Sbjct: 35 TTTIASGIQTTQCNTCTKTPQRVDPVKTTTKAPAATTKAVPLQCQKCT--PFKDPMNAAA 92
Query: 218 ALKLTTEGNYGGISQNNLNCTPEHGSIRDPINPCFA 111
TT N G S ++ CT G D I C A
Sbjct: 93 KCTATTGMNSPGCSTLSVKCTINAGFECD-ITKCMA 127
>AL021503-6|CAA16424.2| 459|Caenorhabditis elegans Hypothetical
protein Y68A4A.10a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.8
Identities = 27/96 (28%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Frame = -2
Query: 386 TKTAKEYMTTIPCSVLLNTAAE----NNVTEAPIVENEKVEIDTINSTTSPFSDDPNQAV 219
T T + T C+ T T+AP + V + T PF D N A
Sbjct: 35 TTTIASGIQTTQCNTCTKTPQRVDPVKTTTKAPAATTKAVPLQCQKCT--PFKDPMNAAA 92
Query: 218 ALKLTTEGNYGGISQNNLNCTPEHGSIRDPINPCFA 111
TT N G S ++ CT G D I C A
Sbjct: 93 KCTATTGMNSPGCSTLSVKCTINAGFECD-ITKCMA 127
>Z70038-3|CAA93883.2| 541|Caenorhabditis elegans Hypothetical
protein ZK1067.4 protein.
Length = 541
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 305 APIVENEKVEIDTINSTTSPFSDDPNQAVALKLTTEGNYGGISQNNLNCTPEH 147
AP+ E + I + ++ S S +++ LK ++ N S NN N PEH
Sbjct: 488 APLYERLRRSISSRLASISHSSSKDLKSLTLKSSSSNNNNNNSNNNNNDDPEH 540
>Z81125-2|CAD56600.1| 507|Caenorhabditis elegans Hypothetical
protein T22A3.4b protein.
Length = 507
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -2
Query: 539 NCTLTISGEKATEVL-AIPCAIATSFSPDANTKNINSNNNGQDGTKCIVTVIT-KTAKEY 366
NC T + + L AI CA +P ++ N + K IV T K A+EY
Sbjct: 266 NCECTRCMDPEDDALTAIRCANPACDAPILTSETEEPMNIACEKCKTIVEEDTVKAAQEY 325
Query: 365 MTTIPCS 345
M T+P S
Sbjct: 326 MKTLPAS 332
>Z81125-1|CAB03382.1| 501|Caenorhabditis elegans Hypothetical
protein T22A3.4a protein.
Length = 501
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -2
Query: 539 NCTLTISGEKATEVL-AIPCAIATSFSPDANTKNINSNNNGQDGTKCIVTVIT-KTAKEY 366
NC T + + L AI CA +P ++ N + K IV T K A+EY
Sbjct: 266 NCECTRCMDPEDDALTAIRCANPACDAPILTSETEEPMNIACEKCKTIVEEDTVKAAQEY 325
Query: 365 MTTIPCS 345
M T+P S
Sbjct: 326 MKTLPAS 332
>Z70754-5|CAA94775.1| 304|Caenorhabditis elegans Hypothetical
protein F58E6.5 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 365 MTTIPCSVLLNTAAENNVTEAPIVENEKVEIDTINSTTS 249
MTT P + +VT AP+ + + V I+ IN++TS
Sbjct: 1 MTTAPDLTKVVFNPSKSVTFAPVEKKQAVSIEVINNSTS 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,575,747
Number of Sequences: 27780
Number of extensions: 340800
Number of successful extensions: 1172
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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