Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e04r
(747 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage sti... 82 9e-16
AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA... 82 9e-16
BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p pro... 81 1e-15
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei... 31 1.3
X87141-1|CAA60619.1| 722|Drosophila melanogaster VND (ventral n... 30 2.9
AL031883-2|CAA21410.1| 723|Drosophila melanogaster EG:118B3.1,F... 30 2.9
AE014298-61|AAF45521.1| 723|Drosophila melanogaster CG6172-PA, ... 30 2.9
AE014298-60|ABI30961.1| 577|Drosophila melanogaster CG6172-PB, ... 30 2.9
AY069490-1|AAL39635.1| 576|Drosophila melanogaster LD21931p pro... 30 3.9
AE014297-3088|AAF55949.1| 576|Drosophila melanogaster CG6015-PA... 30 3.9
AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p pro... 29 8.9
AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-P... 29 8.9
AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-P... 29 8.9
AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-P... 29 8.9
AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-P... 29 8.9
AE014297-3571|ABI31204.1| 814|Drosophila melanogaster CG13624-P... 29 8.9
AE014297-3570|ABI31203.1| 814|Drosophila melanogaster CG13624-P... 29 8.9
>AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage
stimulation factor 64kilodalton subunit protein.
Length = 419
Score = 81.8 bits (193), Expect = 9e-16
Identities = 41/49 (83%), Positives = 45/49 (91%)
Frame = -2
Query: 191 IPSGASDQEKAALIMQVLQLSDEQIALLPPEQRASILLLKEQIAKSTQQ 45
+PS ASDQEKAALIMQVLQLSDEQIA LP EQR SI++LKEQIAKSTQ+
Sbjct: 371 LPSDASDQEKAALIMQVLQLSDEQIAQLPSEQRVSIVMLKEQIAKSTQR 419
Score = 66.1 bits (154), Expect = 5e-11
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -2
Query: 746 NEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPSNPVPPILLPGDKPAQ 585
+EAR ML+ NPQLAYALLQA V+MRIVDP A+ ML +N +PP+L G P Q
Sbjct: 155 SEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVL--GGNPHQ 206
>AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA
protein.
Length = 419
Score = 81.8 bits (193), Expect = 9e-16
Identities = 41/49 (83%), Positives = 45/49 (91%)
Frame = -2
Query: 191 IPSGASDQEKAALIMQVLQLSDEQIALLPPEQRASILLLKEQIAKSTQQ 45
+PS ASDQEKAALIMQVLQLSDEQIA LP EQR SI++LKEQIAKSTQ+
Sbjct: 371 LPSDASDQEKAALIMQVLQLSDEQIAQLPSEQRVSIVMLKEQIAKSTQR 419
Score = 66.1 bits (154), Expect = 5e-11
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -2
Query: 746 NEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPSNPVPPILLPGDKPAQ 585
+EAR ML+ NPQLAYALLQA V+MRIVDP A+ ML +N +PP+L G P Q
Sbjct: 155 SEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVL--GGNPHQ 206
>BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p
protein.
Length = 437
Score = 81.4 bits (192), Expect = 1e-15
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = -2
Query: 191 IPSGASDQEKAALIMQVLQLSDEQIALLPPEQRASILLLKEQIAKSTQ 48
+PS ASDQEKAALIMQVLQLSDEQIA LP EQR SI++LKEQIAKSTQ
Sbjct: 371 LPSDASDQEKAALIMQVLQLSDEQIAQLPSEQRVSIVMLKEQIAKSTQ 418
Score = 66.1 bits (154), Expect = 5e-11
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -2
Query: 746 NEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPSNPVPPILLPGDKPAQ 585
+EAR ML+ NPQLAYALLQA V+MRIVDP A+ ML +N +PP+L G P Q
Sbjct: 155 SEARQMLMLNPQLAYALLQAMVVMRIVDPQQALGMLFKANQMPPVL--GGNPHQ 206
>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
protein.
Length = 4167
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = -2
Query: 194 GIPSGASDQEKAALIMQVLQLSDEQIALLPPEQRASILLLKEQIAKSTQQR*K 36
G+ + QEK +L+ + L+ S EQ+ +L E I +++ Q +++T+Q+ K
Sbjct: 2755 GLSKISETQEKVSLMSEELKASSEQVKILARECEDFISMIEIQKSEATEQKEK 2807
>X87141-1|CAA60619.1| 722|Drosophila melanogaster VND (ventral
nervous system defective)protein.
Length = 722
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 568 HPIHHQHNHRYTIIPDRHPTSTTIPV 491
HP H QH+H + ++P +H P+
Sbjct: 297 HPHHQQHHHPHLLLPQQHHQQAVAPL 322
>AL031883-2|CAA21410.1| 723|Drosophila melanogaster
EG:118B3.1,FBgn0003986;vnd protein.
Length = 723
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 568 HPIHHQHNHRYTIIPDRHPTSTTIPV 491
HP H QH+H + ++P +H P+
Sbjct: 298 HPHHQQHHHPHLLLPQQHHQQAVAPL 323
>AE014298-61|AAF45521.1| 723|Drosophila melanogaster CG6172-PA,
isoform A protein.
Length = 723
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 568 HPIHHQHNHRYTIIPDRHPTSTTIPV 491
HP H QH+H + ++P +H P+
Sbjct: 298 HPHHQQHHHPHLLLPQQHHQQAVAPL 323
>AE014298-60|ABI30961.1| 577|Drosophila melanogaster CG6172-PB,
isoform B protein.
Length = 577
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 568 HPIHHQHNHRYTIIPDRHPTSTTIPV 491
HP H QH+H + ++P +H P+
Sbjct: 152 HPHHQQHHHPHLLLPQQHHQQAVAPL 177
>AY069490-1|AAL39635.1| 576|Drosophila melanogaster LD21931p
protein.
Length = 576
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2
Query: 665 DPATAVTMLHPSNPVPPILLPGDK 594
D ATA T PS P+P LLP DK
Sbjct: 19 DAATATTNSEPSAPIPDHLLPVDK 42
>AE014297-3088|AAF55949.1| 576|Drosophila melanogaster CG6015-PA
protein.
Length = 576
Score = 29.9 bits (64), Expect = 3.9
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2
Query: 665 DPATAVTMLHPSNPVPPILLPGDK 594
D ATA T PS P+P LLP DK
Sbjct: 19 DAATATTNSEPSAPIPDHLLPVDK 42
>AY069850-1|AAL39995.1| 755|Drosophila melanogaster SD09792p
protein.
Length = 755
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 342 SLPERSAVGQCSTVQPGSEGAFKRSTKPAETATAN 238
S PERS + Q + + PG F S T T+N
Sbjct: 443 SPPERSILSQSAALSPGGSSGFGSSASGNSTTTSN 477
>AE014297-3575|AAN14003.1| 755|Drosophila melanogaster CG13624-PD,
isoform D protein.
Length = 755
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 342 SLPERSAVGQCSTVQPGSEGAFKRSTKPAETATAN 238
S PERS + Q + + PG F S T T+N
Sbjct: 443 SPPERSILSQSAALSPGGSSGFGSSASGNSTTTSN 477
>AE014297-3574|AAN14002.1| 755|Drosophila melanogaster CG13624-PC,
isoform C protein.
Length = 755
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 342 SLPERSAVGQCSTVQPGSEGAFKRSTKPAETATAN 238
S PERS + Q + + PG F S T T+N
Sbjct: 443 SPPERSILSQSAALSPGGSSGFGSSASGNSTTTSN 477
>AE014297-3573|AAN14001.1| 755|Drosophila melanogaster CG13624-PB,
isoform B protein.
Length = 755
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 342 SLPERSAVGQCSTVQPGSEGAFKRSTKPAETATAN 238
S PERS + Q + + PG F S T T+N
Sbjct: 443 SPPERSILSQSAALSPGGSSGFGSSASGNSTTTSN 477
>AE014297-3572|AAF56314.2| 755|Drosophila melanogaster CG13624-PA,
isoform A protein.
Length = 755
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 342 SLPERSAVGQCSTVQPGSEGAFKRSTKPAETATAN 238
S PERS + Q + + PG F S T T+N
Sbjct: 443 SPPERSILSQSAALSPGGSSGFGSSASGNSTTTSN 477
>AE014297-3571|ABI31204.1| 814|Drosophila melanogaster CG13624-PF,
isoform F protein.
Length = 814
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 342 SLPERSAVGQCSTVQPGSEGAFKRSTKPAETATAN 238
S PERS + Q + + PG F S T T+N
Sbjct: 443 SPPERSILSQSAALSPGGSSGFGSSASGNSTTTSN 477
>AE014297-3570|ABI31203.1| 814|Drosophila melanogaster CG13624-PE,
isoform E protein.
Length = 814
Score = 28.7 bits (61), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 342 SLPERSAVGQCSTVQPGSEGAFKRSTKPAETATAN 238
S PERS + Q + + PG F S T T+N
Sbjct: 443 SPPERSILSQSAALSPGGSSGFGSSASGNSTTTSN 477
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,505,064
Number of Sequences: 53049
Number of extensions: 710309
Number of successful extensions: 3073
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3066
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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