Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e04f
(561 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 222 2e-58
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 71 5e-13
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 70 2e-12
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 67 8e-12
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 66 1e-11
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 57 9e-09
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 56 3e-08
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 54 6e-08
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 52 2e-07
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 52 2e-07
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 52 3e-07
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 52 3e-07
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 51 6e-07
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 51 7e-07
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 50 1e-06
SB_2275| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 50 1e-06
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 50 2e-06
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 48 4e-06
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 48 7e-06
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 45 4e-05
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 45 5e-05
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 44 6e-05
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 43 1e-04
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 43 1e-04
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 42 3e-04
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 42 3e-04
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 42 5e-04
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 41 8e-04
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 41 8e-04
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 33 0.001
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 40 0.001
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 38 0.004
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.017
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 36 0.017
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 36 0.023
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 34 0.091
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 33 0.12
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 33 0.21
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 32 0.28
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 32 0.37
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69) 31 0.49
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_1889| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 31 0.85
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 30 1.5
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_27469| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-08) 29 3.4
SB_4283| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28) 28 4.5
SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11) 28 4.5
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 28 6.0
SB_2341| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 222 bits (542), Expect = 2e-58
Identities = 101/145 (69%), Positives = 129/145 (88%), Gaps = 1/145 (0%)
Frame = +3
Query: 129 KSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYG 308
++++K+ D+S+RSVFVGNIPYEA+EE+LK+IFSEVGPV+SF+LVFDRETGKPKGYG
Sbjct: 10 QAQQKQSSGAADRSLRSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYG 69
Query: 309 FCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE-NPYGDPVE 485
FCEYKDQETALSAMRNLNGYE+ GR+LRVD+A +EK++ E++++ + E +PYG PV
Sbjct: 70 FCEYKDQETALSAMRNLNGYELNGRALRVDSAASEKNKEEIKSMEMTARPEVSPYGQPVP 129
Query: 486 PEKAPEAISKAVATLPPEQMFELMK 560
PE+APEAI++AVA+LPPEQMFELMK
Sbjct: 130 PEEAPEAITQAVASLPPEQMFELMK 154
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/94 (32%), Positives = 55/94 (58%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
++VG++ + TE +K +F G V S +L++D ET + KGYGF ++++ E A AM +
Sbjct: 244 LYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQM 303
Query: 360 NGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVE 461
NG+E+ GR L++ TE+ + + + E
Sbjct: 304 NGFELAGRPLKI-GPVTERGDSSAYSFLDDEEYE 336
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/125 (28%), Positives = 62/125 (49%)
Frame = +3
Query: 165 KSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALS 344
K +++ ++ + E+ +K +F G V+ L + TGK KGYGF EY++Q++A
Sbjct: 196 KKYARIYIASVHPDLLEDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSAND 255
Query: 345 AMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISKAVA 524
A+ ++N +++GG+ LRV A T + M A+ P P + I
Sbjct: 256 AIASMNLFDLGGQFLRVGRAITPPTSSAMAAINTTPPGTLPAAAAIAAAAVSAKIQAEER 315
Query: 525 TLPPE 539
+PPE
Sbjct: 316 GIPPE 320
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/75 (37%), Positives = 42/75 (56%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
M V+VG+I +E EE ++ F GP+ L +D K KG+ F EY E A A+
Sbjct: 101 MCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLAL 160
Query: 351 RNLNGYEIGGRSLRV 395
+NG +GGR+++V
Sbjct: 161 EQMNGVLLGGRNIKV 175
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 67.3 bits (157), Expect = 8e-12
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Frame = +3
Query: 123 MDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG 302
M K + E+ K +V+V N + +E++K+I +E G ++S K++ D E GK KG
Sbjct: 92 MSKKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKG 150
Query: 303 YGFCEYKDQETALSAMRNLNGYEIGGRSL-------RVDNAC-----TEKSRMEMQALMQ 446
+GF ++ E A A+ LNG EIGGR L R + A EK R E Q
Sbjct: 151 FGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQ 210
Query: 447 GPQVE-NPYGDPVEPEKAPEAIS 512
G + DP++ E+ E S
Sbjct: 211 GVNLYIKNLDDPIDDERLREEFS 233
Score = 47.2 bits (107), Expect = 9e-06
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKD--QETALSAM 350
S++VG++ + TE L + FS G VLS ++ D T + GY + ++ + AL A+
Sbjct: 14 SLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHDAALEAI 73
Query: 351 RNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPY----GDPVEPEKAPEAISKA 518
++G + + + V ++K R+E Q + N Y GD ++ E+ E ++A
Sbjct: 74 ARVDGMLLNDKKVFVGRWMSKKERIEKMG-TQPKKFTNVYVKNFGDDMDDEQMKEICAEA 132
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/102 (25%), Positives = 54/102 (52%)
Frame = +3
Query: 117 IKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKP 296
+K + K+++E+ + + ++++ N+ +E+L++ FS G + S K++ D + G
Sbjct: 194 VKAEIEKKRQERINRFQGV-NLYIKNLDDPIDDERLREEFSPYGTISSAKVMKD-DKGNS 251
Query: 297 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
KG+GF + E A A+ +NG + + L V A + R
Sbjct: 252 KGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQRREER 293
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/93 (34%), Positives = 58/93 (62%)
Frame = +3
Query: 117 IKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKP 296
I D ++K + ++FV N+P++A E +++++FS+ G V +LV +R GKP
Sbjct: 152 ITEDHLRDKFSKFPTSLDKHTLFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNR-AGKP 210
Query: 297 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 395
KGYG+ EY+ + +A +A+ L+ E+ GR++ V
Sbjct: 211 KGYGYVEYEQESSASTAVLTLDKTEVKGRTISV 243
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +3
Query: 129 KSKEKEEQSIMDKSM--RSVFVGNIPYEATEEKLKDIFSE 242
+++E+E +D+S R VF+ N+ + TE+ L+D FS+
Sbjct: 124 QTEEEELPKHLDRSSDPRKVFISNLLFSITEDHLRDKFSK 163
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/74 (39%), Positives = 51/74 (68%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
RSVF+GN+P++ EE L+++F+ G V S +L+ DR+TG KG+G+ ++ ++ + A++
Sbjct: 56 RSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALK 115
Query: 354 NLNGYEIGGRSLRV 395
+N E GR +RV
Sbjct: 116 -MNNAEFKGRKIRV 128
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +3
Query: 153 SIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQE 332
+++ S +F+G +P E+++K++ S G + +F LV D TG KGY FCEY D
Sbjct: 666 TVVPDSPHKIFIGGLPNYLNEDQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLG 725
Query: 333 TALSAMRNLNGYEIGGRSLRVDNA 404
A++ LNG ++G + L V A
Sbjct: 726 ITDVAIQGLNGMQLGDKKLIVQRA 749
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +3
Query: 153 SIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKL-----VFDRETGKPKGYGFCE 317
S M + R ++VGNIP+ TE + + F+ V + + + F E
Sbjct: 556 SQMTRQARRLYVGNIPFGVTENLMIEFFNAKMKEAKLNTAPGNPVIAAQINTEQNFAFIE 615
Query: 318 YKDQETALSAMRNLNGYEIGGRSLRV 395
+ E AM +G + G++L++
Sbjct: 616 LRSVEETTQAMA-FDGIILQGQALKI 640
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSA---M 350
+FVGN+P+E TE + D+ S G + LV TG KGYGF EY +E A+ A +
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 351 RNLNGYEIGGRSLRV 395
N IGGR LRV
Sbjct: 175 LNTASKYIGGRILRV 189
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 60.1 bits (139), Expect = 1e-09
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FV NI EA E+ + ++FS+ G + + + DR TG KGY EY+ + A SA+ L
Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354
Query: 360 NGYEIGGRSLRVDNAC----TEKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISKAVAT 527
NG E+ G+++ VD A ++KSR +QA+ P + +P++ + S V T
Sbjct: 355 NGAEMLGQNISVDWAFIRGPSKKSR-SLQAVTSLP-LSKRIANPLQITMNTTSASVPVMT 412
Query: 528 LPP 536
P
Sbjct: 413 TSP 415
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
S+ V N+ Y+ T + L F + K++FDRE+G+ +G+GF +Y D ETA +
Sbjct: 290 SLIVRNLSYDTTTDSLGAAFEGCS---NAKVIFDRESGESRGFGFVDYDDVETAKKVLSE 346
Query: 357 LNGYEIGGRSLRVDNA 404
+ G E+ GR +R+D A
Sbjct: 347 MAGAEVDGRQVRLDFA 362
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/99 (28%), Positives = 56/99 (56%)
Frame = +3
Query: 126 DKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGY 305
D+ ++++ K SVF+GN+ ++A EE L F E G + +++ + G+ +G+
Sbjct: 164 DEETPTPKKTVPAKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVI--TQEGRSRGF 221
Query: 306 GFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
G+ ++ +E A+ LNG + GR +R++ A ++ SR
Sbjct: 222 GYADFTSKEDYNKAL-ELNGEDCCGREIRINPANSKPSR 259
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/76 (35%), Positives = 44/76 (57%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++ + +P ++E +K IF VG V S KL+ DR TG+ GY F Y + + A A+R
Sbjct: 28 NLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVRE 87
Query: 357 LNGYEIGGRSLRVDNA 404
+NG + ++L+V A
Sbjct: 88 MNGARLQNKTLKVSFA 103
Score = 37.1 bits (82), Expect = 0.010
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FV +P EAT L +FS G + + +L D KGYGF + E A A+ L
Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIELKLD------KGYGFVNMSNYEEACHAICCL 327
Query: 360 NGYEIGGRSLR 392
NG G+ R
Sbjct: 328 NGTPQHGKYSR 338
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/73 (32%), Positives = 46/73 (63%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
++F+ ++P E T+ L F G V+S K+ D++T K +GF Y + +A +A+++
Sbjct: 278 NLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQH 337
Query: 357 LNGYEIGGRSLRV 395
+NG++IG + L+V
Sbjct: 338 MNGFQIGAKRLKV 350
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/71 (32%), Positives = 43/71 (60%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
+K VF+G +P + E++L +F E G + F+L+ D +G KG+ FC + +++ A
Sbjct: 148 EKVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQ 207
Query: 342 SAMRNLNGYEI 374
+A++ L+ EI
Sbjct: 208 NAVKKLDNKEI 218
Score = 41.9 bits (94), Expect = 3e-04
Identities = 30/113 (26%), Positives = 54/113 (47%)
Frame = +3
Query: 111 TIIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETG 290
T+ D +E ++ ++ K ++ V++ N+ TEEKLK+ +S+ G V DR
Sbjct: 310 TVDWADPQEEPDDDAM--KKVKVVYLRNLSPSITEEKLKEEYSQYGAV-------DR-VK 359
Query: 291 KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQG 449
K K Y F + +++ AL A+ +G E+ G + A + + Q G
Sbjct: 360 KLKDYAFVHFTERDHALKAIEETDGKEMDGLKIEASLAKPQPGNKDRQRGQSG 412
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVF--DRETGKPKGYGFCEYKDQETALSAMR 353
+FVG+IP +++++ + FS+V L +V+ + GK +G+ F EY+ + A A R
Sbjct: 235 LFVGSIPKTKSKQEILEEFSKVTNGLDDVIVYLSADQKGKNRGFAFLEYESHQAASLARR 294
Query: 354 NL 359
L
Sbjct: 295 RL 296
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/80 (31%), Positives = 48/80 (60%)
Frame = +3
Query: 183 FVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLN 362
++GN+ ++ E L+D FS V+ +++ DRET +P+G+ F + ++ A+ L+
Sbjct: 233 YIGNLDFKVNEADLQDRFSRYD-VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELD 291
Query: 363 GYEIGGRSLRVDNACTEKSR 422
G E GRS++V+ A + + R
Sbjct: 292 GQEFDGRSMKVNQARSREQR 311
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 186 VGNIPYEATEEKLKDIFSEVGP--VLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
V +IP E + +F G +LS K++ DRETG+P+G+GF + ++ A+
Sbjct: 11 VASIPLCFVESEADVLFLRNGSKFLLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKF 70
Query: 360 NGYEIGGRSLRVDNA 404
+G ++ GR ++V+ A
Sbjct: 71 DGEDLDGRPMKVNKA 85
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 56.4 bits (130), Expect = 1e-08
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +3
Query: 246 GPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
G +++ LV D++TGK KG+ F Y+DQ + + A+ N NG ++GGR++RVD+ C+ R
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRVDH-CSNYRR 60
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
++S VF+G IP + E++L + + G + F+L D TG KG+ FC + +Q +A
Sbjct: 149 EESGTEVFIGKIPRDCLEDELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAY 208
Query: 342 SAMRNLNGYEI-GGRSLRVDNACTEKSRMEMQALMQG 449
A+ LN +I GR L + C KSR + ++G
Sbjct: 209 QAITTLNDKDIRPGRRLAI---C--KSRSNSRLFVKG 240
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/74 (32%), Positives = 44/74 (59%)
Frame = +3
Query: 183 FVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLN 362
++GN+ Y E+ L++ F V+ K++ DRETG+P+G+GF + +E A+ +
Sbjct: 8 YIGNLSYSVDEQALEEKFHGCD-VVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFD 66
Query: 363 GYEIGGRSLRVDNA 404
G + GR ++V+ A
Sbjct: 67 GQDFDGRPMKVNQA 80
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 54.4 bits (125), Expect = 6e-08
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETA 338
D + +FVG + YE T+E LK+ FS+ G ++ + D TG+P+G+ F ++K Q A
Sbjct: 25 DDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEA 83
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/91 (20%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEV-GPVLSFKLVFDRETGKPKGYGFCEYKDQETALSA 347
++ +FVG + E ++EK+++ F + PV + + + + + +G+ F + D E +
Sbjct: 102 VKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSF-DSEDTVDK 160
Query: 348 MRNLNGYEIGGRSLRVDNACTEKSRMEMQAL 440
+ + I G + V A ++ + + AL
Sbjct: 161 ICETQFHNIEGNKVEVKRALPKEVQQQQAAL 191
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/75 (30%), Positives = 45/75 (60%)
Frame = +3
Query: 168 SMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSA 347
S +V+VGN+PY T L +F G V+ ++ D+ET + +G F + D+++A +A
Sbjct: 8 SKSTVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNA 67
Query: 348 MRNLNGYEIGGRSLR 392
+ +N ++ GR+++
Sbjct: 68 VAAVNKKQMFGRTIK 82
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/87 (27%), Positives = 51/87 (58%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
+++VG + + +E + ++F + GPV++ + DR T +GYGF E+ +E A A++
Sbjct: 14 TIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKV 73
Query: 357 LNGYEIGGRSLRVDNACTEKSRMEMQA 437
+N ++ G+ +RV+ A +++ A
Sbjct: 74 MNMIKVYGKPIRVNKASAHNKNLDVGA 100
Score = 50.0 bits (114), Expect = 1e-06
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSF-KLVFDRETGKPKGYGFCEYKDQETALSAMR 353
++F+GN+ E E+ L D FS G +L K++ D +TG KG+ F + + + +A+
Sbjct: 101 NLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIE 160
Query: 354 NLNGYEIGGRSLRVDNACTEKSRME 428
+NG + R + V A ++S+ E
Sbjct: 161 AMNGQYLCNRPITVSYAFKKESKGE 185
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+F G++ E T+E L F++ L K+V D+++ K KGYGF +KD + AMR +
Sbjct: 219 IFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMREM 278
Query: 360 N 362
N
Sbjct: 279 N 279
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/65 (36%), Positives = 37/65 (56%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
VFVG IP + E++L +F GP+ +L+ D G+ +GY F Y ++ A ++ L
Sbjct: 76 VFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGYAFVVYTSKDDAKRCVKTL 134
Query: 360 NGYEI 374
N YEI
Sbjct: 135 NNYEI 139
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Frame = +3
Query: 120 KMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRET-GKP 296
K SK+ + ++ K+ ++FV N+PY T+ + K F E+GP+ +V D++ +
Sbjct: 4 KASPSKKASKTPVISKT--TIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRC 61
Query: 297 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 398
+G+G+ + +E AL A N+ I GR + +D
Sbjct: 62 RGFGYVTFALEEDALKAKDNIK--SIKGRPIHLD 93
Score = 32.7 bits (71), Expect = 0.21
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 23/124 (18%)
Frame = +3
Query: 192 NIPYEATEEKLKDIFSEVG--------PVLSFKLVFDRE------TGKPKGYGFCEYKDQ 329
N+P + E++L +FS+ G V+S L+ +E G+P G+ F E+ +
Sbjct: 575 NLPLKLNEKELSKVFSKAGTLDNHKPAKVVSVLLMRSKERLDSSGKGRPLGFAFVEFTNH 634
Query: 330 ETALSAMRNLNGY-EIGGRSLR------VDNACTEKSRMEMQA--LMQGPQVENPYGDPV 482
+ AL+A+R N E+ G R ++N+ K++ + Q + Q+E+ G +
Sbjct: 635 KEALAALRATNNNPELFGPDRRPIVEFSIENSVALKAKQQRQQRNKQKHKQMESQSGQDL 694
Query: 483 EPEK 494
+ K
Sbjct: 695 QTNK 698
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/81 (34%), Positives = 41/81 (50%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
D +FVG IPYE+ ++ L+ F++ G + ++ DR T K KGYGF + A
Sbjct: 6 DTKFTKLFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
Query: 342 SAMRNLNGYEIGGRSLRVDNA 404
A +N I GR V+ A
Sbjct: 66 LACKNKRPM-IEGRQANVNLA 85
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 50.8 bits (116), Expect = 7e-07
Identities = 25/77 (32%), Positives = 42/77 (54%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R +VG + E E+ L F G + ++ D T K +G+GF E++ E +A+
Sbjct: 5 RVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAID 64
Query: 354 NLNGYEIGGRSLRVDNA 404
N+N E+ GR++RV+ A
Sbjct: 65 NMNESELFGRTIRVNLA 81
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 50.8 bits (116), Expect = 7e-07
Identities = 25/86 (29%), Positives = 46/86 (53%)
Frame = +3
Query: 138 EKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCE 317
++ E +S ++ V IP + T++ + +F V + + K+V + +G G+GF +
Sbjct: 35 QQPEPQEAQESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVD 94
Query: 318 YKDQETALSAMRNLNGYEIGGRSLRV 395
Y E A A+ LNG+ IG + L+V
Sbjct: 95 YNTTEDAQKAIDKLNGFTIGNKVLKV 120
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/101 (24%), Positives = 50/101 (49%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
+++V NIP + E + + F G +++ +L+ D+ TG PKG GF Y + A +A+ +
Sbjct: 134 NLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISS 193
Query: 357 LNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPYGDP 479
L+G G ++ + + + +++ P G P
Sbjct: 194 LSGTFFPGSTMGLQIRYADDNSAKVRPPNNVPNFGQQMGGP 234
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/85 (27%), Positives = 44/85 (51%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRN 356
+++V NI Y+A +E + +F + G V +++D + + KG+ F QE A +A++
Sbjct: 276 TLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQT 335
Query: 357 LNGYEIGGRSLRVDNACTEKSRMEM 431
LNG+ + L+ T R +
Sbjct: 336 LNGFMYTNKPLQSSRIRTLNRRSRL 360
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/91 (25%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Frame = +3
Query: 147 EQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLV--------FDRETGKPKG 302
+Q ++ V+ GN+P++ T+++LK +F ++ L+ + ++ + +G
Sbjct: 41 DQKMVFADPNKVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRG 100
Query: 303 YGFCEYKDQETALSAMRNLNGYEIGGRSLRV 395
+GF + + E A +A+++LNG E+ GR+L++
Sbjct: 101 FGFVTFANPEDAQTAVKSLNGKEVQGRTLKI 131
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 50.0 bits (114), Expect = 1e-06
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +3
Query: 117 IKMDKSKEKEEQSIMDKSMRSV-FVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGK 293
IK +++++ + K R + FVGN+P++ T EK+ D F G SF+L+ +
Sbjct: 54 IKTEETEDVITKEQDGKKQRYILFVGNLPFDLTTEKVLDHFRCAGS-SSFRLLTKKTDNS 112
Query: 294 PKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNAC 407
KG GF E D A+ NL+ +GGR + V+ C
Sbjct: 113 SKGCGFLEIDDSIGYTKAL-NLHHSYLGGRKINVEVTC 149
>SB_2275| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/25 (84%), Positives = 25/25 (100%)
Frame = +3
Query: 189 GNIPYEATEEKLKDIFSEVGPVLSF 263
GNIPYEA+EE+LK+IFSEVGPV+SF
Sbjct: 2 GNIPYEASEEQLKEIFSEVGPVISF 26
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/59 (32%), Positives = 39/59 (66%)
Frame = +3
Query: 183 FVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
++GN+ Y E+ L++ F + V+ +++ DRETG+P+G+GF + ++T + ++NL
Sbjct: 85 YIGNLSYSVDEQALEEKFHDCN-VVDVRVITDRETGRPRGFGFVTLEAKKTRIKPLKNL 142
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
V+VGN+P + E+ L DIF + G + L R G P + F E++D A A++
Sbjct: 263 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPP--FAFVEFEDPRDAEDAVKGR 320
Query: 360 NGYEIGGRSLRVD 398
+G+E G +RV+
Sbjct: 321 DGHEFDGYRIRVE 333
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 168 SMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRE---TGKPKGYGFCEYKDQETA 338
S R +++GN+ +E + I + G + F+ +F G+P+GY F E+K +E A
Sbjct: 385 SERKLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDA 444
Query: 339 LSAMRNLNGYEIGGRSLRVDNACTEKS 419
A+R LN + R+L VD A KS
Sbjct: 445 RKALRGLNKKIVLSRALVVDWAHHHKS 471
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/91 (27%), Positives = 48/91 (52%)
Frame = +3
Query: 120 KMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPK 299
K+ K K K ++ + + +++G+IP+ E ++K F + G V +L +++ + K
Sbjct: 82 KVKKIKPKGDEDELSPGV--IYLGHIPHGFFENEIKKFFEQFGTVNRIRLSRSKKSARSK 139
Query: 300 GYGFCEYKDQETALSAMRNLNGYEIGGRSLR 392
GY F E+ E A A ++ Y + GR L+
Sbjct: 140 GYAFVEFACDEVAKIAADTMHNYMMFGRLLK 170
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/59 (33%), Positives = 37/59 (62%)
Frame = +3
Query: 219 KLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 395
+L F G V+S K+ D++T K +GF Y + +A +A++++NG++IG + L+V
Sbjct: 277 RLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKV 335
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 48.0 bits (109), Expect = 5e-06
Identities = 20/74 (27%), Positives = 43/74 (58%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMR 353
R +++GN+ + + E +++ F E G V ++ D+E+G+ +G+GF + + A+
Sbjct: 9 RKLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIE 67
Query: 354 NLNGYEIGGRSLRV 395
+N +GGR++ V
Sbjct: 68 KMNQSSVGGRNITV 81
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
D + +VFV N+ Y+ +KLKD F G V+ +++ D E K KG G +++ A+
Sbjct: 181 DPAASTVFVTNLDYKVNWQKLKDTFKCAGHVIRAEIMEDDEK-KSKGMGTVQFETPMEAM 239
Query: 342 SAMRNLNGYEIGGRSLRV 395
+A+ L+G + R+LRV
Sbjct: 240 NAVNLLHGKMLMDRALRV 257
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPK 299
+ VFV NIP+E+ + LKD ++V ++F +F+ E G+ K
Sbjct: 93 KKVFVSNIPFESRWQNLKDHMNKVVGDVAFAEIFEDEKGRSK 134
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKD----IFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
+++++ N+ + +E+LK IFS+ GP+L + +T K +G F +KD +A
Sbjct: 7 QTIYIKNLNEKIKKEELKKSLYAIFSQFGPILD---IVALKTLKMRGQAFVVFKDIGSAT 63
Query: 342 SAMRNLNGYEIGGRSLRVDNACTEKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISKAV 521
+A+R++ G+ + +R+ A K + + A +G V P E KAPE ++
Sbjct: 64 NALRSMQGFPFYDKPMRIQYA---KGKSDAVAKAEGTFVPRE-KKPKEKRKAPENAARPA 119
Query: 522 ATLP 533
+P
Sbjct: 120 KKVP 123
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/84 (29%), Positives = 45/84 (53%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
++S++V N+P +E +LK +F++ G + + + D YGF + +E+A+ A+
Sbjct: 1 VKSIYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRD--------YGFVYFAKRESAVQAI 52
Query: 351 RNLNGYEIGGRSLRVDNACTEKSR 422
+NG I G L V A + SR
Sbjct: 53 DGINGAYIDGCKLEVSLAIPQSSR 76
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +3
Query: 165 KSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALS 344
+ +R +F+G + + TEE LKD FS+ G ++ V + G+ +G+GF Y+ ++
Sbjct: 47 EKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVD--CVIMKRDGRSRGFGFVTYESSDSVNE 104
Query: 345 AMR 353
++
Sbjct: 105 VLK 107
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 44.4 bits (100), Expect = 6e-05
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FV + T+E L+ IFS G +LS +++ D++TG+ Y F E++ E A +
Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181
Query: 360 NGYEIGGRSLRVD-NACTEKSRMEMQ 434
+ I R + VD + K +++M+
Sbjct: 182 DNVLIDDRRIHVDFSQSVSKIKLQMR 207
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/76 (27%), Positives = 38/76 (50%)
Frame = +3
Query: 141 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
KE+ ++ V N+ E E L+++F +GP+ L D+ T + KG+ F +
Sbjct: 170 KEDDGSGQHETATIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
Query: 321 KDQETALSAMRNLNGY 368
+E A A+ L+G+
Sbjct: 230 VHREDAARAIEVLSGF 245
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 267 LVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 404
++ DRETG+P+G+GF + +E A+ +G ++ GR ++V+ A
Sbjct: 127 IITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEA 172
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +3
Query: 267 LVFDRETGKPKGYGFCEYKDQETALSAMRNL-----NGYEIGGRSLRVDNAC-TEKSRME 428
+V+DRET + + +G+ ++D++ A AM+ + G EI GR+L ++ A E S
Sbjct: 7 VVYDRETRRSRNFGYVTFRDEQDAADAMKQMGGESGKGKEIFGRALNIEYAQEKESSAPR 66
Query: 429 MQALMQGPQVENPYGDPVEPEKAP 500
GP P G P+ AP
Sbjct: 67 RGGYGGGPPRGPPRGHPMRGRGAP 90
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +3
Query: 138 EKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCE 317
E +++ + +FVG + E T E L++ F G + ++ D T K +G+G+
Sbjct: 2 ENRQENTNNDPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVT 61
Query: 318 YKDQETALSAMRNL--NG-YEIGGRSLRVDNA 404
+ D + + +++ NG + I G+ + V A
Sbjct: 62 FADYKVTRNVLKDKVENGAHRIDGKEVEVKRA 93
>SB_16080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/95 (27%), Positives = 46/95 (48%)
Frame = +3
Query: 114 IIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGK 293
II+++ + K+ ++F+ N+ + EE L +F + KLVF G+
Sbjct: 94 IIRIECASYKKGPLSETNFAETLFLKNLSNKVKEEDLIRLFLRFQQNGAPKLVFRLMKGR 153
Query: 294 PKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 398
KG F + D E A+ A +NGY + GR + ++
Sbjct: 154 MKGQAFVTFPDSEVAIKAHSLVNGYRLKGRPVIIE 188
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/78 (30%), Positives = 42/78 (53%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
M V++GNI A++ +++ F GP+ + + P G+ FC ++D+ A A+
Sbjct: 1 MSRVYIGNIGDNASKREIEREFETFGPLRDVWVARN-----PPGFAFCVFEDRRDAEDAV 55
Query: 351 RNLNGYEIGGRSLRVDNA 404
R L+G I G+ RV+ A
Sbjct: 56 RELDGRYICGQRARVELA 73
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/79 (31%), Positives = 41/79 (51%)
Frame = +3
Query: 159 MDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETA 338
++K+ RSVFVG + EE LKD F + G V S + + G + YGF +KD +
Sbjct: 75 IEKNSRSVFVGGLASGTDEEGLKDYFEQFGEVESVR-IMRTFLGYSRNYGFVLFKDDGPS 133
Query: 339 LSAMRNLNGYEIGGRSLRV 395
++ + I G+++ V
Sbjct: 134 KEVLK--KSHVINGKTVDV 150
Score = 35.1 bits (77), Expect = 0.040
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +3
Query: 141 KEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEY 320
+E+Q + + R++FV N+ + E + F G V ++ DRETGK KG G +
Sbjct: 311 EEKQGVRE---RTLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKL 367
Query: 321 KDQET 335
+ T
Sbjct: 368 RHPGT 372
Score = 32.3 bits (70), Expect = 0.28
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +3
Query: 165 KSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQE 332
++ R ++VG +P TE+ +++ F + G + + K + + G G E +DQE
Sbjct: 154 RNFRVIYVGGLPSHFTEQTVREHFKKFGVIEAVKFIENTSVGAKTGXXXXE-EDQE 208
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 41.9 bits (94), Expect = 3e-04
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
V++G +PY TE+ ++ F G + R+ YGF E++D A A+
Sbjct: 5 VYLGRLPYGTTEDDVRRFFRSYGRL--------RDINLKNNYGFVEFEDDRDADDAVYEC 56
Query: 360 NGYEIGGRSLRVDN----ACTEKSRMEMQALMQGPQVENPYGDPVE 485
NG E+ G + V++ A + SR GP V P+ +E
Sbjct: 57 NGKEMLGERILVEHSRGGARSSSSRPSRGRDKYGPPVRTPWRMTIE 102
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
V++G + + TE L ++F++ GPV ++ D E+GK + GF + + A +A +
Sbjct: 526 VWIGGLSEDVTENVLLELFNKFGPVKDVVILRD-ESGKSRQSGFVHFWSSDVAEAANVGM 584
Query: 360 NGYEIGGR 383
NG +I G+
Sbjct: 585 NGCDILGK 592
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 40.7 bits (91), Expect = 8e-04
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +3
Query: 129 KSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYG 308
K E + + + + V +PY TE ++K+ F+ G + ++ D T + +G+G
Sbjct: 100 KEPETKITKVEGVDVGDLIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFG 159
Query: 309 FCEYKDQETALSAMRNLNGYEIGGRSLRV 395
F +K E A + + + I GR V
Sbjct: 160 FVRFKKDEDAKNVLS--TSHRIQGRLCEV 186
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 246 GPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNG 365
G +++ LV D++TGK KG+ F Y+DQ + + A+ N NG
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNG 42
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 40.7 bits (91), Expect = 8e-04
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 111 TIIKMDKSKEKEEQ-SIMDKSMR--SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDR 281
TI +K K+ + ++ K+M+ +P+ A + LK +FSE G VL L +
Sbjct: 64 TIASFNKIKQMTDDIKLVKKAMKLSQQLEEKLPFHADHDWLKKVFSEFGKVLYVSLPRFK 123
Query: 282 ETGKPKGYGFCEYKDQETALSAMRNLN 362
G+ KG+ F E++ ++ A ++ N
Sbjct: 124 HNGEIKGFAFIEFESKQQAEHVVQMFN 150
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/78 (28%), Positives = 43/78 (55%)
Frame = +3
Query: 171 MRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAM 350
M V++G++ A++ ++++ F GP+ + + P G+ FC + D+ A A+
Sbjct: 31 MTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARN-----PPGFAFCIFDDRRDAEDAV 85
Query: 351 RNLNGYEIGGRSLRVDNA 404
R L+G I G+ +RV+ A
Sbjct: 86 RELDGRYICGQRVRVELA 103
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 33.5 bits (73), Expect(2) = 0.001
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 231 IFSEVGPVLSFKLVFDRETG-KPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 404
+ EV + +++ +RE + +G+GF ++QE R +G+E GR L+V A
Sbjct: 60 LVKEVSLSILARVIMEREQPERSRGFGFVTLENQEDLEDVTRKFDGFEYEGRRLKVAEA 118
Score = 25.8 bits (54), Expect(2) = 0.001
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVG 248
V+ GN+P+ ++ L+ +F + G
Sbjct: 11 VYAGNLPFSLNDDSLRQLFEDSG 33
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 126 DKSKEKEEQSIM-DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG 302
D+S+E+ S D ++FV N+ +E+TEE LK F+ VGPV S + ++ KP G
Sbjct: 517 DQSEEQNAGSDEEDTEGVTLFVKNLSFESTEEALKQKFAAVGPVKSATIAKKKDPKKPGG 576
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/52 (32%), Positives = 33/52 (63%)
Frame = +3
Query: 243 VGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 398
+G ++S +V++ + KP+GY F EY+ + +A ++ +G +I GR + VD
Sbjct: 31 IGRIIS--MVYNSKASKPRGYAFIEYEHERDMHAAYKHADGKKIDGRRIVVD 80
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPV--LSFKLVFDRETGKPKGYGFCEYKDQ 329
+ +F+G + E +EE +K + + P L K+V DRET K KGY F + ++
Sbjct: 104 KKLFIGGLKDEHSEEDVKTALAPLSPFAPLEIKMVRDRETNKFKGYCFVNFPNE 157
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 38.3 bits (85), Expect = 0.004
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
++VGN+ A +L+ F + G + K+ R P G+ F EY+D A A+R L
Sbjct: 6 LYVGNLGRNADSSELERAFEKFGRLS--KVWVARN---PPGFAFVEYEDYRDAEEAVREL 60
Query: 360 NGYEIGGRSLRVD 398
+G + R++RV+
Sbjct: 61 DGANVCDRTIRVE 73
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 303 YGFCEYKDQETALSAMRNLNGYEIGGRSLRV 395
+GFCEY D E +L A+R L+ ++G +SL V
Sbjct: 88 FGFCEYSDPEASLRAIRLLHNLQVGDKSLVV 118
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = +3
Query: 132 SKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG 302
SK+ + ++ + VFVGNI ++ +LKD F G V+ +++ DR + KG
Sbjct: 66 SKDISKYKVVSNKCK-VFVGNIGFKVRARELKDFFGYFGDVVYAQIIMDRVKKRSKG 121
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +3
Query: 222 LKDIFSEVGPVL----SFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSL 389
L DIFS P L ++V D K KG+GF + +E A A+ ++ IGG+ +
Sbjct: 525 LDDIFSYTVPDLFVAREVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQV 584
Query: 390 RVDNACTEKSRMEMQALM 443
+ + A + + + + L+
Sbjct: 585 KTNWAARKNNPTQTKPLV 602
Score = 33.9 bits (74), Expect = 0.091
Identities = 19/79 (24%), Positives = 41/79 (51%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
++ RS++VGN+ + T+E + IF+++ V+ K++ P Y F E++ A
Sbjct: 365 EEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGP--YCFVEFETHADAQ 422
Query: 342 SAMRNLNGYEIGGRSLRVD 398
A ++ + + L+V+
Sbjct: 423 EAKFRMDQRTVMDKKLKVN 441
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +3
Query: 177 SVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQE 332
+V+VGN+P + + +L+ +FS+ G +L K+ D KGY F + ++
Sbjct: 616 TVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD------KGYAFINARGEK 661
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 36.3 bits (80), Expect = 0.017
Identities = 20/79 (25%), Positives = 44/79 (55%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
D + R V N P + LKD+FS G ++ ++ K + +G+ ++ +++A
Sbjct: 335 DVASRLFIVCN-PAPPPDHVLKDVFSRFGNLIDVWMM------KERNFGYAKFAAKQSAD 387
Query: 342 SAMRNLNGYEIGGRSLRVD 398
+A++ L+G+++ G L++D
Sbjct: 388 AAIQGLHGHDVLGMKLKID 406
Score = 31.1 bits (67), Expect = 0.64
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 210 TEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYE 371
T+E++ +F + + L + TG+ KG+ + Y +A+ A LNG+E
Sbjct: 214 TQEQVVRLFDIIPGMQVCDLKRNYNTGESKGFAYVTYNSVGSAIYAKEKLNGFE 267
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/81 (23%), Positives = 43/81 (53%)
Frame = +3
Query: 108 HTIIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRET 287
H+I ++ KE+ +Q R++++ + + + L+ +F G + ++ +T
Sbjct: 48 HSIQELLSHKEEHDQ-------RTIYIRDFRPDIRKSSLESVFGPYGAIEDLSII-RTQT 99
Query: 288 GKPKGYGFCEYKDQETALSAM 350
GK KG+G+ Y++ E+A A+
Sbjct: 100 GKSKGFGYVTYENAESAQRAL 120
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/71 (22%), Positives = 34/71 (47%)
Frame = +3
Query: 138 EKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCE 317
+ ++++S R++FVG++ E + + FS +G + +GK KG+ F
Sbjct: 30 QSPSMDLLEQSRRTIFVGSLHPSTVESTIFEYFSTLGEQVEHVKCIRTLSGKSKGFAFVR 89
Query: 318 YKDQETALSAM 350
+ +E S +
Sbjct: 90 LRKKEAVESVL 100
Score = 31.1 bits (67), Expect = 0.64
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Frame = +3
Query: 108 HTIIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRET 287
H I D S EK++ + R V + NIP E ++ + FS G + S + + +T
Sbjct: 105 HVIDNSDVSMEKQD------TYRKVILKNIPSSIGESQILEHFSSSGEIASVYIPENLKT 158
Query: 288 GKPKGYGFCEYKDQETALSAMR----NLNGYEI 374
+ KG+ + A ++ +++GY+I
Sbjct: 159 KERKGHCIVTFASVTEAFEVVKKRKHHIHGYDI 191
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 33.9 bits (74), Expect = 0.091
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 153 SIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPK 299
S+ D + +FVG +P E+ L+ IF G + ++ D+ TG+ K
Sbjct: 163 SVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHK 211
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Frame = +3
Query: 180 VFVGNIPYEATE--EKLKDI----FSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETAL 341
+ V N+P E EKLK++ FS+ G +++ +++ +GY F E+ + A+
Sbjct: 74 IVVDNVPKVGPERVEKLKNVIRKVFSKFGQIVTEHYPMEKDL--TRGYIFLEFSNASDAV 131
Query: 342 SAMRNLNGYEI 374
A++ NGY++
Sbjct: 132 RAVKTANGYKL 142
>SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1572
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 297 KGYGFCEYKDQETALSAMRNLNGYEIGGRSLR 392
+ Y F YK AL+AMRNLNG + LR
Sbjct: 85 RSYSFVSYKSHNNALNAMRNLNGKALDEFGLR 116
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/72 (34%), Positives = 38/72 (52%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FVGN+ + EE++K++F + G V VF K KG+GF + A +A L
Sbjct: 55 LFVGNL-IDCDEEEMKEMFKKYGEVAE---VF---INKEKGFGFIRLDTRLHAEAAKAGL 107
Query: 360 NGYEIGGRSLRV 395
+ GR+LRV
Sbjct: 108 DMATRKGRTLRV 119
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 279 RETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVD 398
R+ +GYGF E+ D A A+ +LNG ++ G + V+
Sbjct: 716 RDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVE 755
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 237 SEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRV 395
S GP+ + ++ D+ TG+ + +GF E+ + A L+G + R++ V
Sbjct: 478 SNAGPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASELLDGIRLYDRAINV 530
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +3
Query: 204 EATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGR 383
+A+ E L+ F + G + ++ D T + +G+GF +KD + A+ + N E+ G+
Sbjct: 118 QASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPK-AVDVVLNSGAQELDGK 176
Query: 384 SL 389
+
Sbjct: 177 KM 178
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 31.9 bits (69), Expect = 0.37
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKP---------------KGYG 308
+ + V NIP+ + L+ +F G + +++++ K +G+G
Sbjct: 68 KRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYNERGSKHAVRFPTRPNPLNLRIEGFG 127
Query: 309 FCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKS 419
F + A A LNG + GR + V + C E+S
Sbjct: 128 FVTFNTAAEANKAREKLNGTIVDGRKVEV-SLCMEQS 163
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 31.5 bits (68), Expect = 0.49
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +3
Query: 159 MDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETA 338
M +S R V+ G +P + E L+ G V RE GYGF E+ D A
Sbjct: 1 MSRSTR-VYFGRLPRDCRERDLEKFVRGYGRV--------REISMKLGYGFVEFDDYRDA 51
Query: 339 LSAMRNLNGYEIGG 380
+ +LNG + G
Sbjct: 52 DDCVYDLNGRNLLG 65
>SB_24012| Best HMM Match : RRM_1 (HMM E-Value=0.69)
Length = 166
Score = 31.5 bits (68), Expect = 0.49
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +3
Query: 108 HTIIKMDKSK--EKEEQSIMDKSMRSVFVGN--IPYEATEEKLKDIFSEVGPVLSFKLVF 275
HT++ S E E+ MD+ + F+ + + + L ++ ++ ++S + V
Sbjct: 38 HTVMNSPISGLLEYPEKLCMDRIDATGFISRAFVEFVVVHKMLLNV--KLHSLMSKENVK 95
Query: 276 DRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRS 386
D ++G+ K YGF +KD+E AM N + G +S
Sbjct: 96 DLKSGRSKKYGFVFFKDEEACEKAMGNQPHFIEGQKS 132
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.5 bits (68), Expect = 0.49
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKGYGFCEYKDQETALSAMRNL 359
+FVG + E L+++F G +L L YGF EY+D A AMR
Sbjct: 8 LFVGRLSKETKLRDLENVFYLYGKLLRCDL--------KTAYGFIEYEDPRDAEEAMRRE 59
Query: 360 NGYEIGGRSLRVD 398
N ++ G + V+
Sbjct: 60 NNRKLFGSRIVVE 72
>SB_1889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 28
Score = 31.1 bits (67), Expect = 0.64
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 246 GPVLSFKLVFDRETGKPKGYGFCEYKDQ 329
G V +LV +R GKPKGYG+ EY+ +
Sbjct: 2 GVVKQVRLVTNR-AGKPKGYGYVEYEQE 28
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 30.7 bits (66), Expect = 0.85
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 174 RSVFVGNIPYEATEEKLKDIFSEVGPVLSFK 266
R+VFVGN+P ++ LK FS+ G V S +
Sbjct: 21 RTVFVGNLPLTLKKKALKKYFSKYGEVESVR 51
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 162 DKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLV 272
D+S+ +++VG + + TE+ L+D F + G + S +V
Sbjct: 300 DRSITTLYVGGLEGKVTEQDLRDHFYQFGELRSISMV 336
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 123 MDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKL 269
M K KEK E R+VF+G +P E + +IF G + S ++
Sbjct: 340 MQKQKEKPE------GCRTVFIGGLPESINEHIINEIFYVCGEITSIRI 382
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 111 TIIKMDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFD 278
T + + E + I D + F+GN+PY+ E + + FS V + K+ D
Sbjct: 256 TAPRSSRPTEVDLSKIPDNPPFTAFLGNLPYDVEREDILEFFSSVKSLRGRKVRVD 311
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 180 VFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGK 293
VF+G + + TEE LK+ FS G V K + RE G+
Sbjct: 204 VFIGGLAFGTTEEDLKEYFSTYGMVEVKKAEY-RERGQ 240
>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 270 VFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNA 404
++ G KG Y+D TA +A+ NG + G+S++V+ A
Sbjct: 209 IYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFMGQSIKVELA 253
>SB_27469| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-08)
Length = 341
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -1
Query: 462 FLPEVLALELAFPFAISLYKHYLLLTNDHQFRIH*DFSWHSKPFPGLYIHKTHNLWVYRF 283
FL ++L L F ++++ H +L+ N ++ F+W P LYI+ N+ VY F
Sbjct: 199 FLMTFVSL-LCFLPSVAIASHEILMNNGDDNKLDIHFAW-----PILYINSFINVLVYSF 252
Query: 282 R 280
R
Sbjct: 253 R 253
>SB_4283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 411 EKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISKAV 521
EK+ ME G ++NP G+PV K E+ K +
Sbjct: 15 EKTHMESGIHALGSGIQNPIGEPVMGRKKAESTKKKI 51
>SB_41561| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.28)
Length = 1643
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 276 DRETGKPKGYGFCEYKDQET 335
D+ETGK KG C + DQET
Sbjct: 1138 DQETGKTKGEKECLFPDQET 1157
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 276 DRETGKPKGYGFCEYKDQET 335
D+ETGK KG C + DQET
Sbjct: 1169 DQETGKIKGEKECLFSDQET 1188
>SB_2246| Best HMM Match : G-patch (HMM E-Value=5.5e-11)
Length = 396
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 309 FCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEKSR 422
F E+ E+A+ A+ +LNG GGR+++ + +K R
Sbjct: 351 FVEFTRMESAIKAVVDLNGRYFGGRTVKANFFNLDKFR 388
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 132 SKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVL 257
SKE + VF+GN+P + + ++FS+ G +L
Sbjct: 343 SKEGRMAARSAPDSHQVFIGNLPSGVKDADVNEVFSKYGTIL 384
>SB_2341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 27.5 bits (58), Expect = 7.9
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Frame = +3
Query: 108 HTIIKMDKSKEKEEQSIMDKSMR-------SVFVGNIPYEATEEKLKDIFSEVGPVLSFK 266
H++I+ + K K Q +M ++ R + +A+ KL ++G + +
Sbjct: 435 HSVIEQIEKKAKGTQEVMHENTRFSRNPFPDASCSGMLADASAAKLAQQQGKIG--VDGQ 492
Query: 267 LVFDRETGKPKGYGFCEYKDQETALSAMRNLNGYEIGGRSLRVDNACTEK 416
++ ET K G+GF + A + I G R+D + T K
Sbjct: 493 VIAPSETPKVNGFGFIATPSPAPGVDASPLMTWGSIDGTPFRLDGSDTPK 542
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,991,508
Number of Sequences: 59808
Number of extensions: 299328
Number of successful extensions: 1053
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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