Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11e01f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59357-1|CAA42007.1| 128|Homo sapiens Epstein-Barr virus small ... 104 2e-22
D17652-1|BAA04545.1| 128|Homo sapiens HBp15/L22 protein. 104 2e-22
CR456873-1|CAG33154.1| 128|Homo sapiens RPL22 protein. 104 2e-22
BC066314-1|AAH66314.1| 128|Homo sapiens ribosomal protein L22 p... 104 2e-22
BC058887-1|AAH58887.1| 128|Homo sapiens ribosomal protein L22 p... 104 2e-22
BC035566-1|AAH35566.1| 128|Homo sapiens ribosomal protein L22 p... 104 2e-22
AL031847-9|CAI19448.1| 128|Homo sapiens ribosomal protein L22 p... 104 2e-22
AF136171-1|AAP97261.1| 128|Homo sapiens heparin-binding protein... 104 2e-22
BC107708-1|AAI07709.1| 122|Homo sapiens RPL22L1 protein protein. 93 5e-19
BC062731-1|AAH62731.1| 132|Homo sapiens RPL22L1 protein protein. 93 5e-19
AB061849-1|BAB79487.1| 39|Homo sapiens ribosomal protein L22 p... 41 0.002
>X59357-1|CAA42007.1| 128|Homo sapiens Epstein-Barr virus small RNA
associated protein protein.
Length = 128
Score = 104 bits (250), Expect = 2e-22
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVV-VARDKTKVAITADIPF 341
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL VV + R K+K+ +T+++PF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPF 78
Query: 342 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
S DWLRVVA++ ++YELRYF
Sbjct: 79 SKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>D17652-1|BAA04545.1| 128|Homo sapiens HBp15/L22 protein.
Length = 128
Score = 104 bits (250), Expect = 2e-22
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVV-VARDKTKVAITADIPF 341
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL VV + R K+K+ +T+++PF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPF 78
Query: 342 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
S DWLRVVA++ ++YELRYF
Sbjct: 79 SKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>CR456873-1|CAG33154.1| 128|Homo sapiens RPL22 protein.
Length = 128
Score = 104 bits (250), Expect = 2e-22
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVV-VARDKTKVAITADIPF 341
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL VV + R K+K+ +T+++PF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPF 78
Query: 342 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
S DWLRVVA++ ++YELRYF
Sbjct: 79 SKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>BC066314-1|AAH66314.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 104 bits (250), Expect = 2e-22
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVV-VARDKTKVAITADIPF 341
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL VV + R K+K+ +T+++PF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPF 78
Query: 342 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
S DWLRVVA++ ++YELRYF
Sbjct: 79 SKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>BC058887-1|AAH58887.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 104 bits (250), Expect = 2e-22
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVV-VARDKTKVAITADIPF 341
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL VV + R K+K+ +T+++PF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPF 78
Query: 342 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
S DWLRVVA++ ++YELRYF
Sbjct: 79 SKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>BC035566-1|AAH35566.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 104 bits (250), Expect = 2e-22
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVV-VARDKTKVAITADIPF 341
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL VV + R K+K+ +T+++PF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPF 78
Query: 342 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
S DWLRVVA++ ++YELRYF
Sbjct: 79 SKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>AL031847-9|CAI19448.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 104 bits (250), Expect = 2e-22
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVV-VARDKTKVAITADIPF 341
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL VV + R K+K+ +T+++PF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPF 78
Query: 342 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
S DWLRVVA++ ++YELRYF
Sbjct: 79 SKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>AF136171-1|AAP97261.1| 128|Homo sapiens heparin-binding protein
HBp15 protein.
Length = 128
Score = 104 bits (250), Expect = 2e-22
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +3
Query: 165 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVV-VARDKTKVAITADIPF 341
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL VV + R K+K+ +T+++PF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPF 78
Query: 342 SXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
S DWLRVVA++ ++YELRYF
Sbjct: 79 SKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>BC107708-1|AAI07709.1| 122|Homo sapiens RPL22L1 protein protein.
Length = 122
Score = 93.1 bits (221), Expect = 5e-19
Identities = 44/95 (46%), Positives = 55/95 (57%)
Frame = +3
Query: 168 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVARDKTKVAITADIPFSX 347
+F +D THP ED I D GNFE++L+E VKV GKT NL N V + R K K+ + ++ FS
Sbjct: 15 RFNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSK 74
Query: 348 XXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
DWLRVVAS + YELRYF
Sbjct: 75 RYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 109
>BC062731-1|AAH62731.1| 132|Homo sapiens RPL22L1 protein protein.
Length = 132
Score = 93.1 bits (221), Expect = 5e-19
Identities = 44/95 (46%), Positives = 55/95 (57%)
Frame = +3
Query: 168 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNLSNHVVVARDKTKVAITADIPFSX 347
+F +D THP ED I D GNFE++L+E VKV GKT NL N V + R K K+ + ++ FS
Sbjct: 25 RFNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSK 84
Query: 348 XXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 452
DWLRVVAS + YELRYF
Sbjct: 85 RYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 119
>AB061849-1|BAB79487.1| 39|Homo sapiens ribosomal protein L22
protein.
Length = 39
Score = 41.1 bits (92), Expect = 0.002
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3
Query: 165 LKFTIDCTHPAEDSILDVGNF 227
LKFT+DCTHP ED I+D NF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANF 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,712,802
Number of Sequences: 237096
Number of extensions: 1106588
Number of successful extensions: 2055
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2045
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -