Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d22r
         (801 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q45NH3 Cluster: Putative uncharacterized protein; n=1; ...    36   1.6  
UniRef50_A3LSM2 Cluster: Alpha-1,6-mannosyltransferase; n=2; Sac...    35   2.7  
UniRef50_Q5JJ39 Cluster: Hypothetical membrane protein, conserve...    35   2.7  
UniRef50_A3R6V0 Cluster: Erythrocyte membrane protein 1; n=8; ce...    34   4.8  
UniRef50_A6SS54 Cluster: Putative uncharacterized protein; n=2; ...    33   8.4  

>UniRef50_Q45NH3 Cluster: Putative uncharacterized protein; n=1;
           Medicago sativa|Rep: Putative uncharacterized protein -
           Medicago sativa (Alfalfa)
          Length = 199

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = -3

Query: 547 TLKTLMLTK-GIKRLPKKCVPTLTCSICPMVVLPKLRLRLLFEEWEQPIVQLMPRPRSLV 371
           T+ T +L +   KR+ +  +PT T   CP V   +L + +L       I+ + P P SL 
Sbjct: 3   TVSTTVLCRVSSKRVAE--IPTQTLLFCPFVPKVQLHIIILLLLLISQIIMIKPIPTSLK 60

Query: 370 PQPLLLPEIS 341
             PLLLP  S
Sbjct: 61  NHPLLLPHSS 70


>UniRef50_A3LSM2 Cluster: Alpha-1,6-mannosyltransferase; n=2;
           Saccharomycetales|Rep: Alpha-1,6-mannosyltransferase -
           Pichia stipitis (Yeast)
          Length = 711

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +3

Query: 447 FGNTTIGQMLHVSVGTHFFGSLLIPFVSISVFNVL 551
           F  T++G ++ + V +HF+G L++P +   VFNV+
Sbjct: 296 FTGTSLGGLISLGVDSHFWGRLVVPEIESFVFNVV 330


>UniRef50_Q5JJ39 Cluster: Hypothetical membrane protein, conserved;
           n=1; Thermococcus kodakarensis KOD1|Rep: Hypothetical
           membrane protein, conserved - Pyrococcus kodakaraensis
           (Thermococcus kodakaraensis)
          Length = 405

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
 Frame = -2

Query: 704 SGFTERYQNSEVVPVENGVIRTAESGERGGTCSEERSSELIKADGYEQSVVK-NVKNANA 528
           SG   R +N+ ++ + NG + T     +G  C    SS   K    +  VV   +K   A
Sbjct: 297 SGKALRVENNSILLLSNGTLLTVPL--KGAECRAYSSSVQFKEITPDVKVVPAELKVGEA 354

Query: 527 HERNQKATEEVRTDTDVQHLPNGGIAK 447
           H +  K  E  R D  +Q+  +GG AK
Sbjct: 355 HLQVTKIKEATRPDRGIQNTGDGGQAK 381


>UniRef50_A3R6V0 Cluster: Erythrocyte membrane protein 1; n=8;
           cellular organisms|Rep: Erythrocyte membrane protein 1 -
           Plasmodium falciparum
          Length = 2737

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = -2

Query: 692 ERYQNSEVVPVENGVIRTAESGERGGTCSEERSSELIKADGYEQSVVKNVKNANAHERNQ 513
           +R+   +V    +G+I+   +   GG+C+  R   +   +  E   V N KN+N    N 
Sbjct: 102 KRFDEGQVCECGSGIIKGNGNNRNGGSCAPPRRRHICDKN-LEALTVGNTKNSNDLLGNI 160

Query: 512 KATEEVRTDTDVQHLPNGG 456
             T +   ++ V++ PN G
Sbjct: 161 LVTAKYEGESIVKNHPNRG 179


>UniRef50_A6SS54 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 494

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = -2

Query: 773 QESLXSGKTSXTSRLLHYEKSDGSGFTERYQNSEVVPVENGVIRTAESGERGGTCSEERS 594
           Q+   + + S  +++L  E +D  G     + S  V VEN +I  A SG+     +EE+ 
Sbjct: 399 QQQEEAARQSILTQILEPEAADRLGRIRLVKESRAVDVENRLIMLARSGQLRSKITEEQL 458

Query: 593 SELIKADGYEQSVVKNV 543
            +L+ +    Q   + +
Sbjct: 459 KDLLSSVSEAQETKEKI 475


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,933,093
Number of Sequences: 1657284
Number of extensions: 11826767
Number of successful extensions: 34369
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34351
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)