Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d22f
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    26   0.19 
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   0.99 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   5.3  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   5.3  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   5.3  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   5.3  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   5.3  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   5.3  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   5.3  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   5.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.0  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   7.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   7.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.2  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 490 LSVVYVPGPGINPLASENFP 431
           +S+ Y+PGP +N + S N P
Sbjct: 34  ISLSYLPGPPVNDIISGNIP 53


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 129 NTLTLKSLKISPA*FALLLFVLNCQYLVSV 40
           N   LK  KI    + LLLFV+N  Y++++
Sbjct: 86  NLKLLKGRKIRKNLYYLLLFVINVLYVLTL 115


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 291 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPA 413
           ++ PG   YN    +   P  YS PP +         AAPA
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYS-PPQVAPQYPQHPYAAPA 61


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 291 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPA 413
           ++ PG   YN    +   P  YS PP +         AAPA
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYS-PPQVAPQYPQHPYAAPA 61


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 291 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPA 413
           ++ PG   YN    +   P  YS PP +         AAPA
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYS-PPQVAPQYPQHPYAAPA 61


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 291 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPA 413
           ++ PG   YN    +   P  YS PP +         AAPA
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYS-PPQVAPQYPQHPYAAPA 61


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 291 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPA 413
           ++ PG   YN    +   P  YS PP +         AAPA
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYS-PPQVAPQYPQHPYAAPA 61


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 291 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPA 413
           ++ PG   YN    +   P  YS PP +         AAPA
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYS-PPQVAPQYPQHPYAAPA 61


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 291 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPA 413
           ++ PG   YN    +   P  YS PP +         AAPA
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYS-PPQVAPQYPQHPYAAPA 61


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +3

Query: 291 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPA 413
           ++ PG   YN    +   P  YS PP +         AAPA
Sbjct: 22  QSSPGTDYYNPNANSTYPPACYS-PPQVAPQYPQHPYAAPA 61


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 447 AKGLMPGPGTYTTDRAAAALTKRPP 521
           A  L+  PG+ TT   + A+   PP
Sbjct: 96  ASPLVQEPGSSTTSATSGAVMASPP 120


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 271 SSFCPKVKAGALGFL 227
           S FCPK K G   F+
Sbjct: 101 SLFCPKAKPGERKFI 115


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 12/50 (24%), Positives = 19/50 (38%)
 Frame = +3

Query: 378 EAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAF 527
           +AK   +       ++ R     + G+ PG          AA+  RPP F
Sbjct: 169 KAKRLQEAELEKLRLSARPLLPPSFGIFPGGAPPLVSPFLAAMAHRPPHF 218


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +3

Query: 186 DNIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPA 311
           +  DP +  P  +  +  +P         P+ N++K+G G A
Sbjct: 183 ERCDPDRPLPLDQKARDLSPRNGSPTDHSPVLNLSKSGGGSA 224


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 434  STTCDTESRCSSFTPFFRFTKYRWHRISIG 345
            STT       S F     FT + W+R  +G
Sbjct: 1811 STTQSLVDPKSEFKVVCYFTNWAWYRQGVG 1840


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,826
Number of Sequences: 336
Number of extensions: 2851
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)