Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d22f
(544 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 33 0.19
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 31 0.59
03_06_0705 + 35647838-35647850,35647966-35648105,35648439-356488... 31 0.59
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 31 0.79
10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257 30 1.4
06_03_0683 - 23490215-23490997 29 1.8
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 29 1.8
12_02_0674 - 21745321-21746223,21746229-21747608 29 2.4
10_08_0802 + 20680685-20681059,20681218-20681353,20682047-206821... 29 2.4
06_01_0336 + 2427017-2427121,2427585-2427662,2427889-2427960,242... 29 2.4
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 29 2.4
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 29 2.4
05_05_0375 + 24486056-24487333 29 3.2
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 29 3.2
07_03_0520 + 19014731-19015795 28 4.2
02_02_0138 + 7114949-7115656,7116388-7116435,7116830-7117988,711... 28 4.2
06_03_1470 + 30371391-30372353 28 5.5
05_05_0315 - 24030695-24030787,24030896-24030995,24031120-240312... 28 5.5
03_05_1081 + 30235677-30236474 28 5.5
02_05_0063 - 25523140-25524405 28 5.5
01_06_1403 - 37059177-37060499,37060898-37061177,37061263-370616... 28 5.5
11_06_0610 - 25449085-25453284 27 7.3
05_03_0557 - 15441039-15442730 27 7.3
05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570 27 7.3
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 27 7.3
01_01_0880 + 6903535-6903932,6904931-6905022,6905601-6905680,690... 27 7.3
11_04_0212 - 14919074-14919433,14919444-14920514 27 9.7
09_04_0430 + 17502387-17503505 27 9.7
03_05_0442 - 24369904-24370578 27 9.7
02_01_0126 + 924691-924839,925103-925220,925303-925389,925482-92... 27 9.7
01_06_1322 - 36290275-36291693,36291837-36291954,36292485-36292516 27 9.7
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 32.7 bits (71), Expect = 0.19
Identities = 37/131 (28%), Positives = 49/131 (37%), Gaps = 13/131 (9%)
Frame = +3
Query: 168 YTISVGDNIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAK-- 341
++ S + PS PP SRKP P QK L I + GP PA T T K
Sbjct: 22 FSFSSSSSPSPSPS-PPSSSRKPPLPPRRSPQKRPGLPTIPENGP-PAGMATATATPKRT 79
Query: 342 -APNTYSMPPVLGEAKE----------GSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTD 488
P + PP A+ GS+ + P GRG+ E P +T
Sbjct: 80 RTPTSTCAPPPPPHARHAPMTGQTPVAGSRSSRPP---RGRGQM-EVDSPQPSRALHTPP 135
Query: 489 RAAAALTKRPP 521
+T+ PP
Sbjct: 136 TGQRQVTRHPP 146
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 31.1 bits (67), Expect = 0.59
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +3
Query: 303 GPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYT 482
G A+Y KAP ++GEA+EGSK +A A G FS + + +
Sbjct: 756 GEAAYAMTDAVKKAPPKVLDLKIVGEAREGSKVSATATVKGGTEGFSRVQWFIGSSSKFL 815
Query: 483 TDRAAAALT 509
+ LT
Sbjct: 816 NENELRVLT 824
>03_06_0705 +
35647838-35647850,35647966-35648105,35648439-35648824,
35648930-35649110,35649498-35649590,35649667-35649806,
35649906-35650005
Length = 350
Score = 31.1 bits (67), Expect = 0.59
Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 6/125 (4%)
Frame = +3
Query: 177 SVGDNIDPSQGKPPPESRKPRAPAFTFGQKL----DP-LANIAKAGPGPASYNTEGMTAK 341
S + P PPP P A F F + DP + +A+ ++ TE M +
Sbjct: 17 SAAEEQPPQAAAPPPRRGVPPANPFDFSTMMNLLNDPSIKEMAEQIAKDPAF-TE-MAEQ 74
Query: 342 APNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPG-TYTTDRAAAALTKRP 518
T PP G A+E + AAPA + S + LM P +R +AL + P
Sbjct: 75 LQKTVQSPPARGAAQEAAAAAAPA--LDPSKYVSTMQQLMQNPQFVAMAERLGSALMQDP 132
Query: 519 PAFTM 533
+M
Sbjct: 133 AMSSM 137
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 30.7 bits (66), Expect = 0.79
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLG 377
PS PP + AP+ + P AN G P S+ + KA + P G
Sbjct: 1163 PSTPSAPPTNSSGSAPSPPSPSQSAPPANTGGGGSPPPSHGSP-PAPKAVQSQPAPKRSG 1221
Query: 378 E--AKEGSKRAAPAFSITGRGKFSEAKGLMPGP 470
+ + S + S + RGK SE+ G PGP
Sbjct: 1222 DGGSSSDSGSSKEGGSSSDRGK-SESNGNRPGP 1253
>10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257
Length = 421
Score = 29.9 bits (64), Expect = 1.4
Identities = 36/105 (34%), Positives = 38/105 (36%)
Frame = +3
Query: 225 SRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRA 404
SR P P LD A I G AS NT T A N PPV A
Sbjct: 262 SRPPPPPPIA-ASTLDK-APITSTDHG-ASTNTSAATPVANNKPPPPPVAATA------- 311
Query: 405 APAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAP 539
T GK E KG P T +TD A + T PPA P
Sbjct: 312 ------TTLGKKGEGKG--KAPTTTSTDHAGSTNTSAPPAANYQP 348
>06_03_0683 - 23490215-23490997
Length = 260
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTA 338
P + +PPP ++ P AP T + P IA A P P + ++ + A
Sbjct: 2 PPRKRPPPPAKAPEAPPETKPKISPPAKPIAAAPPPPKAVLSDTVLA 48
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Frame = +3
Query: 207 GKPPPESRKPRAPAFTFGQKLDPLANIAKAGPG-PASYNTEGMTAKAPNTYS-MPPVLGE 380
G PPP P A +GQ+ G PA+Y+TE TA A S P G
Sbjct: 673 GAPPPYPGAPAASHPGYGQQQSYGDPYGSGSYGQPAAYSTEATTAAASQDQSASAPATGA 732
Query: 381 AKEGSKRAAP 410
A + AP
Sbjct: 733 APATTAAPAP 742
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 29.1 bits (62), Expect = 2.4
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLG 377
PS KP P+ P P PL + + P P+ Y ++ P + +PPV
Sbjct: 406 PSSSKPAPKKITPTPPTLA----PPPLISPKEETPSPSPYIEPPKSSPPPVKFPLPPV-- 459
Query: 378 EAKEGSKRAAPAFSITGRGKFSEAK-GLMPGP 470
S P + TG + S A G +P P
Sbjct: 460 -PLSSSTSEIP--TTTGTSELSTASTGELPSP 488
>10_08_0802 +
20680685-20681059,20681218-20681353,20682047-20682180,
20682722-20682827,20683227-20683312,20683648-20683836,
20684349-20684522,20684638-20684751,20684887-20685141
Length = 522
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 213 PPPESRKPRAPAFTF-GQKLDPLANIAKAGPGPA 311
PPP+ PR P+FT + ++ A A P PA
Sbjct: 27 PPPQPHHPRRPSFTLNAHQAAASSSAASAAPAPA 60
>06_01_0336 +
2427017-2427121,2427585-2427662,2427889-2427960,
2428105-2428671,2428822-2428935,2431308-2432246
Length = 624
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/84 (26%), Positives = 30/84 (35%)
Frame = +3
Query: 273 PLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAK 452
P +G GP+S G + + + P G K S A SI G +
Sbjct: 439 PSTGFTFSGSGPSSAPWPGYLSYGASLSAHPYNAGGGKSSSSFEAALSSINGSRQQGGGG 498
Query: 453 GLMPGPGTYTTDRAAAALTKRPPA 524
G P Y + AAA PP+
Sbjct: 499 GGGSAPPLYQMQQKAAAAAPPPPS 522
>04_04_0293 -
24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAFTFGQKLDPLANI-AKAGPGPASYNTEGMTAKAPNTYSMPP 368
P+ P P++ P PA P A AGP P + T ++KAP+ + P
Sbjct: 13 PAAAGPAPKATAPAGPARKAPAAAGPAPKATAPAGPAPKATATAAPSSKAPSPAAPSP 70
>01_06_1670 - 39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 541 LGAIVKAGGRFVNAAAALSVVYVPGPGINPLASENFPRPVILKAG 407
L + K GR + A SV + P P +NP+ + FPR L+AG
Sbjct: 903 LDQVCKEVGRINDRTIASSVRHFPVP-VNPMMPQLFPRIHALRAG 946
>05_05_0375 + 24486056-24487333
Length = 425
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 289 AILARGSSFCPKVKAG-ALGFLDSGGGLPWEGSMLSPTEI 173
A++AR C AG A+ FL+ G PW G +S TE+
Sbjct: 83 ALVARACRLCAAAPAGAAVEFLERGRAPPW-GRAMSVTEL 121
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/59 (32%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAF--TFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
P G PPP S P P T Q P N + P P + A +P S PP
Sbjct: 41 PVVGSPPPPSPPPPPPLDEETLAQFPSPPTNPSPPPPPPLDADAAAEAAPSPALTSPPP 99
>07_03_0520 + 19014731-19015795
Length = 354
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 343 ALAVIPSVL*EAGPGPAFAILARGSSFCPKVKAGALGFLDSG-GGLP 206
A +V P+ L G PA RG+ PKV+ G G + GG+P
Sbjct: 83 ACSVAPTKLQAEGAAPAAPPRMRGAVVAPKVRGGGGGAVTKARGGVP 129
>02_02_0138 +
7114949-7115656,7116388-7116435,7116830-7117988,
7118336-7118424,7118697-7118732
Length = 679
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -1
Query: 523 AGGRFVNAAAALSVVYVPGPGINPLASENFPRP-VILKAGAALLLPSFASPS 371
A R A +L+V P P PL +P P L AA +L S ASPS
Sbjct: 14 AAARPSPAGPSLTVTVAPTPPPTPLDPRGYPLPRRHLVCAAARILRSHASPS 65
>06_03_1470 + 30371391-30372353
Length = 320
Score = 27.9 bits (59), Expect = 5.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 132 NRLILVRKYCLLYTISVGDNIDPSQGKPPPES 227
+R+ ++YC + +S GDN+D +P P S
Sbjct: 289 DRIGFYKRYCDMLGVSYGDNLDCYNQRPYPPS 320
>05_05_0315 -
24030695-24030787,24030896-24030995,24031120-24031247,
24031350-24031517,24031626-24031741,24031773-24031896,
24032085-24032254,24032255-24032999
Length = 547
Score = 27.9 bits (59), Expect = 5.5
Identities = 25/80 (31%), Positives = 29/80 (36%)
Frame = +3
Query: 201 SQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGE 380
S+ PPP S PA + G P A P PA AP + PVLG
Sbjct: 11 SEPDPPPASSGSSRPAGSAGAAASPATISPSAAPAPAK-------PPAP----IGPVLGR 59
Query: 381 AKEGSKRAAPAFSITGRGKF 440
E K GRG+F
Sbjct: 60 PMEDVKSIYTVGKELGRGQF 79
>03_05_1081 + 30235677-30236474
Length = 265
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 213 PPPESRKPRAPAFTFGQKLDPLANIAKAGPGP-ASYNTEGMTAKAPNTYSMPPVLGEAKE 389
PP + P AP + + + + G A+ G +AP +S PP +GEA
Sbjct: 62 PPAQLHDPTAPPSPIAKAAELVTRFREQGQALIAARRPWGEVFRAP-AFSRPPSVGEAVA 120
Query: 390 GSKRAAPAF 416
++R A F
Sbjct: 121 RARRNAAYF 129
>02_05_0063 - 25523140-25524405
Length = 421
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 369 VLGEAKEGSKRAAPAFSITGRG-KFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAP 539
V G A+ R + F G +F+E G PGP ++ RAAAA A + P
Sbjct: 153 VFGPARRDLLRCSAEFLPKGPPPEFAEDPGAGPGPSSWKRKRAAAAAANTFAADAVKP 210
>01_06_1403 -
37059177-37060499,37060898-37061177,37061263-37061696,
37061782-37061889
Length = 714
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -1
Query: 262 CPKVKAGALGFLDSGGGLPWEGSMLSPTEIVYSKQ 158
C + G + GGGL W+G +SP + KQ
Sbjct: 114 CEAAEDALSGTAEPGGGLSWKGRSVSPRKARQLKQ 148
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +3
Query: 201 SQGKPPPESRKPRAPAFTFGQKLDPLA--NIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
S G PPPE P P P + + AK P PA +G+T+ P Y PP
Sbjct: 457 SHGPPPPEEESPEEPPEEPTPSPTPSSPESPAKMAPPPAP-AIKGVTS-PPAEYGAPP 512
>05_03_0557 - 15441039-15442730
Length = 563
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 301 GPAFAILARGSSFCPKVKAGALGFLDSGGGLPWEGSMLS 185
G F + ARGS+F +++AG FL L S+LS
Sbjct: 34 GRRFKLAARGSTFTTELRAGTTTFLTMAYILAVNASILS 72
>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
Length = 378
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3
Query: 213 PPPESRKPRAPAF 251
PPP R PRAPAF
Sbjct: 235 PPPTKRSPRAPAF 247
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 27.5 bits (58), Expect = 7.3
Identities = 21/58 (36%), Positives = 24/58 (41%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPV 371
P Q P P R P P T G P A I +G PA Y T P + + PPV
Sbjct: 153 PMQMAPLP--RPPTLPPPTSGA---PGAPIPNSGAPPAMYQTNPPQPAGPTSGAPPPV 205
>01_01_0880 +
6903535-6903932,6904931-6905022,6905601-6905680,
6905885-6905926,6906001-6906128,6906530-6906710,
6906801-6906979,6907469-6907717,6907950-6908193
Length = 530
Score = 27.5 bits (58), Expect = 7.3
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
Frame = -1
Query: 499 AAALSVVYVPGPGINPLASENFPRPVILKAGAALLLPSFASPSTGGIE*VLGALAVIPSV 320
A A ++ ++P P +P ++ P P L+LP +S S A A P
Sbjct: 21 AFASTLPFLPSPSPSPTSASPSPSPPAPHLAVPLILPITSSSSA-------SAAAASP-- 71
Query: 319 L*EAGPGPAFAILARGSSFCPKVKAGALGFLDSGGGLPWEG---SMLSPT 179
E+ G A A G KAG G L GGG + G +ML P+
Sbjct: 72 --ESNRGARMAAAASGG------KAGGGGGLGKGGGPAFVGQVFTMLDPS 113
>11_04_0212 - 14919074-14919433,14919444-14920514
Length = 476
Score = 27.1 bits (57), Expect = 9.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 417 SITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMA 536
+++G + A+ +PGPG T D A+A PP+ +A
Sbjct: 159 AVSGAYVMAPARRRLPGPGRPTVDDLASAPEGFPPSSPLA 198
>09_04_0430 + 17502387-17503505
Length = 372
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 204 QGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPV 371
Q +PPP+ PRA + P + +A P S + + + P T + PP+
Sbjct: 167 QPQPPPQPTPPRAAPLPTPPRAPPQSTPPRA--APQSTPPQRVAPQPPATAAAPPI 220
>03_05_0442 - 24369904-24370578
Length = 224
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 399 RAAPAFSITG-RGKFSEAKGLMPGPGTYTTDR 491
RA+ A +I RG E +GL PGPG +R
Sbjct: 85 RASAAIAIERHRGLLDELRGLKPGPGDVGAER 116
>02_01_0126 +
924691-924839,925103-925220,925303-925389,925482-925631,
925750-925809,925914-925976
Length = 208
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Frame = +3
Query: 288 AKAGPGP--ASYN-TEGMTAKAPNTYSMPPVLGEAKEGSKRAAP 410
A+A P P A Y TEGM +PP LG K+G P
Sbjct: 146 AQASPKPPAAMYTITEGMKVGGKRRVIVPPELGYGKKGMNEIPP 189
>01_06_1322 - 36290275-36291693,36291837-36291954,36292485-36292516
Length = 522
Score = 27.1 bits (57), Expect = 9.7
Identities = 25/85 (29%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Frame = +3
Query: 207 GKPPP-ESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEA 383
G PPP S + + L+P A AKA GP + P S P++G
Sbjct: 289 GLPPPLPSAATDSVQTRLSKLLNPRAVRAKASSGPITRRDGPSRVHPPVISSSCPIIGLR 348
Query: 384 KEGSKRA--------APAFSITGRG 434
G K A APA ++ G G
Sbjct: 349 PSGQKAAIDWRKLLDAPASTVGGAG 373
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,404,206
Number of Sequences: 37544
Number of extensions: 341370
Number of successful extensions: 1216
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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