Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d22f
(544 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127935-1|AAI27936.1| 241|Homo sapiens LOC440836 protein protein. 50 5e-06
BC104469-1|AAI04470.1| 289|Homo sapiens chromosome 19 open read... 47 5e-05
BC104468-1|AAI04469.1| 253|Homo sapiens C19orf19 protein protein. 47 5e-05
AK097378-1|BAC05028.1| 289|Homo sapiens protein ( Homo sapiens ... 47 5e-05
BC039862-1|AAH39862.1| 274|Homo sapiens outer dense fiber of sp... 40 0.004
X60655-1|CAA43062.1| 407|Homo sapiens EVX1 protein. 38 0.017
U68782-1|AAB07598.1| 407|Homo sapiens EVX1 protein. 38 0.017
BC127934-1|AAI27935.1| 109|Homo sapiens LOC440836 protein protein. 34 0.28
AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens ... 34 0.37
AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein. 34 0.37
BC126248-1|AAI26249.1| 254|Homo sapiens outer dense fiber of sp... 32 1.1
BC126222-1|AAI26223.1| 254|Homo sapiens outer dense fiber of sp... 32 1.1
AY713299-1|AAW83203.1| 254|Homo sapiens TISP50 protein. 32 1.1
AB067774-1|BAB70734.1| 254|Homo sapiens h-SHIPPO 1 protein. 32 1.1
L12260-1|AAB59622.1| 422|Homo sapiens recombinant glial growth ... 32 1.5
AF491780-1|AAM71140.1| 348|Homo sapiens neuregulin 1 isoform GG... 32 1.5
X83543-1|CAA58534.1| 1616|Homo sapiens APXL protein. 31 2.6
K03205-1|AAA60186.1| 198|Homo sapiens PRB1 protein. 31 2.6
AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activ... 31 2.6
AC002365-1|AAC32592.1| 1561|Homo sapiens APXL protein. 31 2.6
BC141917-1|AAI41918.1| 198|Homo sapiens PRB1 protein protein. 31 3.4
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 30 4.6
D86980-1|BAA13216.1| 336|Homo sapiens KIAA0227 protein. 30 4.6
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 30 4.6
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 30 4.6
AK026162-1|BAB15380.1| 327|Homo sapiens protein ( Homo sapiens ... 30 4.6
AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein. 30 4.6
AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein. 30 4.6
BX537838-1|CAD97850.1| 1410|Homo sapiens hypothetical protein pr... 30 6.0
BC012289-1|AAH12289.1| 326|Homo sapiens KIAA0515 protein protein. 30 6.0
AL358781-1|CAI40214.1| 1535|Homo sapiens KIAA0515 protein. 30 6.0
AB011087-1|BAA25441.1| 670|Homo sapiens KIAA0515 protein protein. 30 6.0
U88666-1|AAC05299.1| 686|Homo sapiens serine kinase SRPK2 protein. 29 8.0
DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein. 29 8.0
BC068547-1|AAH68547.1| 688|Homo sapiens SRPK2 protein protein. 29 8.0
BC066365-1|AAH66365.1| 388|Homo sapiens single stranded DNA bin... 29 8.0
BC035214-1|AAH35214.1| 688|Homo sapiens SFRS protein kinase 2 p... 29 8.0
BC004335-1|AAH04335.2| 216|Homo sapiens SSBP3 protein protein. 29 8.0
BC003605-1|AAH03605.1| 368|Homo sapiens single stranded DNA bin... 29 8.0
AY700780-1|AAU10087.1| 268|Homo sapiens KIAA0515 protein protein. 29 8.0
AY354201-1|AAQ63886.1| 546|Homo sapiens SFRS protein kinase 2 i... 29 8.0
AY026310-2|AAK21985.1| 361|Homo sapiens single stranded DNA bin... 29 8.0
AY026310-1|AAK21984.1| 388|Homo sapiens single stranded DNA bin... 29 8.0
AL354778-1|CAI22988.1| 283|Homo sapiens single stranded DNA bin... 29 8.0
AL161644-7|CAI23563.1| 368|Homo sapiens single stranded DNA bin... 29 8.0
AL161644-6|CAI23562.1| 388|Homo sapiens single stranded DNA bin... 29 8.0
AL161644-5|CAI23561.1| 169|Homo sapiens single stranded DNA bin... 29 8.0
AL161644-4|CAI23560.1| 156|Homo sapiens single stranded DNA bin... 29 8.0
AL161644-3|CAI23559.1| 283|Homo sapiens single stranded DNA bin... 29 8.0
AL035415-2|CAI22488.1| 368|Homo sapiens single stranded DNA bin... 29 8.0
AL035415-1|CAI22487.1| 388|Homo sapiens single stranded DNA bin... 29 8.0
AK001217-1|BAA91561.1| 278|Homo sapiens protein ( Homo sapiens ... 29 8.0
AF500116-1|AAM22101.1| 368|Homo sapiens single-stranded DNA-bin... 29 8.0
AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protei... 29 8.0
AC005070-2|AAC29140.1| 675|Homo sapiens serine kinase SRPK2 pro... 29 8.0
AC005070-1|AAC29141.1| 675|Homo sapiens WUGSC:H_RG152G17.1a pro... 29 8.0
AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein. 29 8.0
>BC127935-1|AAI27936.1| 241|Homo sapiens LOC440836 protein protein.
Length = 241
Score = 50.0 bits (114), Expect = 5e-06
Identities = 39/114 (34%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKA--GPGP-ASYNTEGMTAKAPNTYSMPPVLGE 380
K PP + R P + FG P A + PGP S T P + P
Sbjct: 6 KRPPPALWARTPGWAFGGHTGPAAPSRRTTEAPGPNTSCRPTPQTTCGPGPGHLVPARMT 65
Query: 381 AKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPR 542
+ APA+SI GR + S A L PGPG Y +RA A P T+APR
Sbjct: 66 VR--GTDGAPAYSIYGRPRRS-APFLTPGPGRYFPERAGNATYPSAPRHTIAPR 116
>BC104469-1|AAI04470.1| 289|Homo sapiens chromosome 19 open reading
frame 19 protein.
Length = 289
Score = 46.8 bits (106), Expect = 5e-05
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Frame = +3
Query: 177 SVGDNIDPSQGKPPPESRKPRA----PAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKA 344
S G + P G PE P PAFT G +L PL + + P A
Sbjct: 115 SRGPEVTPGPGAYSPEKVPPARHRTPPAFTLGCRL-PLKPLDTSAP-------------A 160
Query: 345 PNTYSMPPVLGEAKEGSKRAAPAFSITGR---GKFSEAKGLMPGPGTYTTDRAAAALTKR 515
PN Y+MPP+ G ++ +K ++P++++ GR + + +PGPG Y + A +R
Sbjct: 161 PNAYTMPPLWG-SQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSP-DANTYRQR 218
Query: 516 PPAFTMAPR 542
PAFTM R
Sbjct: 219 LPAFTMLGR 227
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 396 KRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPR 542
+ PA+S+ GR K S + PGPG Y+ ++ A + PPAFT+ R
Sbjct: 101 RSCTPAYSMQGRAK-SRGPEVTPGPGAYSPEKVPPARHRTPPAFTLGCR 148
>BC104468-1|AAI04469.1| 253|Homo sapiens C19orf19 protein protein.
Length = 253
Score = 46.8 bits (106), Expect = 5e-05
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Frame = +3
Query: 177 SVGDNIDPSQGKPPPESRKPRA----PAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKA 344
S G + P G PE P PAFT G +L PL + + P A
Sbjct: 79 SRGPEVTPGPGAYSPEKVPPARHRTPPAFTLGCRL-PLKPLDTSAP-------------A 124
Query: 345 PNTYSMPPVLGEAKEGSKRAAPAFSITGR---GKFSEAKGLMPGPGTYTTDRAAAALTKR 515
PN Y+MPP+ G ++ +K ++P++++ GR + + +PGPG Y + A +R
Sbjct: 125 PNAYTMPPLWG-SQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSP-DANTYRQR 182
Query: 516 PPAFTMAPR 542
PAFTM R
Sbjct: 183 LPAFTMLGR 191
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 396 KRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPR 542
+ PA+S+ GR K S + PGPG Y+ ++ A + PPAFT+ R
Sbjct: 65 RSCTPAYSMQGRAK-SRGPEVTPGPGAYSPEKVPPARHRTPPAFTLGCR 112
>AK097378-1|BAC05028.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ40059 fis, clone TCOLN2000139. ).
Length = 289
Score = 46.8 bits (106), Expect = 5e-05
Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Frame = +3
Query: 177 SVGDNIDPSQGKPPPESRKP----RAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKA 344
S G + P G PE P PAFT G +L PL + + P A
Sbjct: 115 SRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRL-PLKPLDTSAP-------------A 160
Query: 345 PNTYSMPPVLGEAKEGSKRAAPAFSITGR---GKFSEAKGLMPGPGTYTTDRAAAALTKR 515
PN Y+MPP+ G ++ +K ++P++++ GR + + +PGPG Y + A +R
Sbjct: 161 PNAYTMPPLWG-SQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSP-DANTYRQR 218
Query: 516 PPAFTMAPR 542
PAFTM R
Sbjct: 219 LPAFTMLGR 227
Score = 40.3 bits (90), Expect = 0.004
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 396 KRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPR 542
+ PA+S+ GR K S + PGPG Y+ ++ + PPAFT+ R
Sbjct: 101 RSCTPAYSMQGRAK-SRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCR 148
>BC039862-1|AAH39862.1| 274|Homo sapiens outer dense fiber of sperm
tails 3-like 1 protein.
Length = 274
Score = 40.3 bits (90), Expect = 0.004
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 342 APNTYSMPPVLGEAKEGSKRAAPAFSITGRGK---FSEAKGLMPGPGTYTTDRAAAALTK 512
APN Y MP +LG S RAAP +S+ R K + E PGP TY +
Sbjct: 157 APNQYQMPLLLGPNTPVS-RAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPE-PSIYQN 214
Query: 513 RPPAFTMAPR 542
R P ++MA R
Sbjct: 215 RSPTYSMAKR 224
>X60655-1|CAA43062.1| 407|Homo sapiens EVX1 protein.
Length = 407
Score = 38.3 bits (85), Expect = 0.017
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 189 NIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
N+ + G P PE + P + P A + G GP +G+ A + P
Sbjct: 26 NLSEAVGSPLPEPPEKMVPRGCLSPRAVPPATRERGGGGPEEEPVDGLAGSAAGPGAEPQ 85
Query: 369 VLGEAKEGSKRAAPAF-SITGRGKFSEA 449
V G A G AP+ S++G+G+ S +
Sbjct: 86 VAGAAMLGPGPPAPSVDSLSGQGQPSSS 113
>U68782-1|AAB07598.1| 407|Homo sapiens EVX1 protein.
Length = 407
Score = 38.3 bits (85), Expect = 0.017
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 189 NIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
N+ + G P PE + P + P A + G GP +G+ A + P
Sbjct: 26 NLSEAVGSPLPEPPEKMVPRGCLSPRAVPPATRERGGGGPEEEPVDGLAGSAAGPGAEPQ 85
Query: 369 VLGEAKEGSKRAAPAF-SITGRGKFSEA 449
V G A G AP+ S++G+G+ S +
Sbjct: 86 VAGAAMLGPGPPAPSVDSLSGQGQPSSS 113
>BC127934-1|AAI27935.1| 109|Homo sapiens LOC440836 protein protein.
Length = 109
Score = 34.3 bits (75), Expect = 0.28
Identities = 29/81 (35%), Positives = 35/81 (43%)
Frame = +3
Query: 231 KPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAP 410
+PRAPAFTFG + GPGP MT + + AP
Sbjct: 25 RPRAPAFTFGARFP--TQQTTCGPGPGHLVPARMTVRGTD-----------------GAP 65
Query: 411 AFSITGRGKFSEAKGLMPGPG 473
A+SI GR + S A L PGPG
Sbjct: 66 AYSIYGRPRRS-APFLTPGPG 85
>AK127255-1|BAC86902.1| 1007|Homo sapiens protein ( Homo sapiens
cDNA FLJ45322 fis, clone BRHIP3006294, moderately
similar to Mus musculus Cdc42 GTPase-activating protein
(Cdgap). ).
Length = 1007
Score = 33.9 bits (74), Expect = 0.37
Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +3
Query: 198 PSQGKP-PPESRKPRAPAFTFGQKLDPLANIAKAGP-GPASYNTEGMTAKAPNTYSMPPV 371
P+ G P PP S P APA F ++ P A I+ GP PAS + P S+PP
Sbjct: 614 PTPGDPAPPASPAPPAPASAFPPRVTPQA-ISPRGPTSPAS--PAALDISEPLAVSVPPA 670
Query: 372 LGEAKEGSKRAAPAFSITGRGKFSEAKGLMP 464
+ E APA S T S + L P
Sbjct: 671 VLELLGAG--GAPA-SATPTPALSPGRSLRP 698
>AC002398-4|AAB81198.1| 903|Homo sapiens F25965_3 protein.
Length = 903
Score = 33.9 bits (74), Expect = 0.37
Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +3
Query: 198 PSQGKP-PPESRKPRAPAFTFGQKLDPLANIAKAGP-GPASYNTEGMTAKAPNTYSMPPV 371
P+ G P PP S P APA F ++ P A I+ GP PAS + P S+PP
Sbjct: 395 PTPGDPAPPASPAPPAPASAFPPRVTPQA-ISPRGPTSPAS--PAALDISEPLAVSVPPA 451
Query: 372 LGEAKEGSKRAAPAFSITGRGKFSEAKGLMP 464
+ E APA S T S + L P
Sbjct: 452 VLELLGAG--GAPA-SATPTPALSPGRSLRP 479
>BC126248-1|AAI26249.1| 254|Homo sapiens outer dense fiber of sperm
tails 3 protein.
Length = 254
Score = 32.3 bits (70), Expect = 1.1
Identities = 32/117 (27%), Positives = 49/117 (41%)
Frame = +3
Query: 192 IDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPV 371
I P+ G K RAPA++F + P+ PGP YN P +
Sbjct: 32 IPPTTGFMKHTPTKLRAPAYSF--RGAPMLLAENCSPGPR-YNVN------------PKI 76
Query: 372 LGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPR 542
L K+ PA+SI GR + L PGPG Y +++ + P+ +++ R
Sbjct: 77 LRTGKD----LGPAYSILGR--YQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISAR 127
>BC126222-1|AAI26223.1| 254|Homo sapiens outer dense fiber of sperm
tails 3 protein.
Length = 254
Score = 32.3 bits (70), Expect = 1.1
Identities = 32/117 (27%), Positives = 49/117 (41%)
Frame = +3
Query: 192 IDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPV 371
I P+ G K RAPA++F + P+ PGP YN P +
Sbjct: 32 IPPTTGFMKHTPTKLRAPAYSF--RGAPMLLAENCSPGPR-YNVN------------PKI 76
Query: 372 LGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPR 542
L K+ PA+SI GR + L PGPG Y +++ + P+ +++ R
Sbjct: 77 LRTGKD----LGPAYSILGR--YQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISAR 127
>AY713299-1|AAW83203.1| 254|Homo sapiens TISP50 protein.
Length = 254
Score = 32.3 bits (70), Expect = 1.1
Identities = 32/117 (27%), Positives = 49/117 (41%)
Frame = +3
Query: 192 IDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPV 371
I P+ G K RAPA++F + P+ PGP YN P +
Sbjct: 32 IPPTTGFMKHTPTKLRAPAYSF--RGAPMLLAENCSPGPR-YNVN------------PKI 76
Query: 372 LGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPR 542
L K+ PA+SI GR + L PGPG Y +++ + P+ +++ R
Sbjct: 77 LRTGKD----LGPAYSILGR--YQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISAR 127
>AB067774-1|BAB70734.1| 254|Homo sapiens h-SHIPPO 1 protein.
Length = 254
Score = 32.3 bits (70), Expect = 1.1
Identities = 32/117 (27%), Positives = 49/117 (41%)
Frame = +3
Query: 192 IDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPV 371
I P+ G K RAPA++F + P+ PGP YN P +
Sbjct: 32 IPPTTGFMKHTPTKLRAPAYSF--RGAPMLLAENCSPGPR-YNVN------------PKI 76
Query: 372 LGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAPR 542
L K+ PA+SI GR + L PGPG Y +++ + P+ +++ R
Sbjct: 77 LRTGKD----LGPAYSILGR--YQTKTMLTPGPGDYFPEKSTKYVFDSAPSHSISAR 127
>L12260-1|AAB59622.1| 422|Homo sapiens recombinant glial growth
factor 2 protein.
Length = 422
Score = 31.9 bits (69), Expect = 1.5
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +3
Query: 207 GKPPPESRKPRAPAFTFGQ-KLDPLANI---AKAGPGPASYNTEGMTAKAPNTYSMPPVL 374
G+P P +++P + A + L PL + A PG A+ N E A A YS PP +
Sbjct: 11 GRPGPRAQRPGSAARSSPPLPLLPLLLLLGTAALAPGAAAGN-EAAPAGASVCYSSPPSV 69
Query: 375 GEAKEGSKRAA 407
G +E ++RAA
Sbjct: 70 GSVQELAQRAA 80
>AF491780-1|AAM71140.1| 348|Homo sapiens neuregulin 1 isoform GGF2
protein.
Length = 348
Score = 31.9 bits (69), Expect = 1.5
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +3
Query: 207 GKPPPESRKPRAPAFTFGQ-KLDPLANI---AKAGPGPASYNTEGMTAKAPNTYSMPPVL 374
G+P P +++P + A + L PL + A PG A+ N E A A YS PP +
Sbjct: 11 GRPGPRAQRPGSAARSSPPLPLLPLLLLLGTAALAPGAAAGN-EAAPAGASVCYSSPPSV 69
Query: 375 GEAKEGSKRAA 407
G +E ++RAA
Sbjct: 70 GSVQELAQRAA 80
>X83543-1|CAA58534.1| 1616|Homo sapiens APXL protein.
Length = 1616
Score = 31.1 bits (67), Expect = 2.6
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAFTFGQKLD-PLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVL 374
P+ +PPP R+PR T G D P+ + + P P+ + + A+ ++S P V
Sbjct: 1060 PAPQRPPPPKREPRRYRATDGAPADAPVGVLGRPFPTPSPASLDVYVARLSLSHS-PSVF 1118
Query: 375 GEAKEGSKRAAPAFS-----ITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAP 539
A+ A ++G + L+P + + A T R P+ AP
Sbjct: 1119 SSAQPQDTPKATVCERGSQHVSGDASRPLPEALLPPKQQHLRLQTATMETSRSPSPQFAP 1178
Query: 540 R 542
+
Sbjct: 1179 Q 1179
>K03205-1|AAA60186.1| 198|Homo sapiens PRB1 protein.
Length = 198
Score = 31.1 bits (67), Expect = 2.6
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +3
Query: 198 PSQGKP---PPESRKPRAPAFTFGQKLDPLANIAK-AGPGPASYNTEGMTAKAPNTYSMP 365
P GKP PP+ K R+P G+ P K GP P N + P P
Sbjct: 72 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGN-KPQGPPPPGKPQGP 130
Query: 366 PVLGEAKEGSKRAAP 410
P G +K S RA P
Sbjct: 131 PAQGGSKSQSARAPP 145
>AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activated,
cyclic nucleotide-gated channel 2 protein.
Length = 889
Score = 31.1 bits (67), Expect = 2.6
Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 2/92 (2%)
Frame = +3
Query: 201 SQGKPPPESRKPRAPAFTFGQKLDPLANIAKAG-PGPASYNTEGMTAKAPNTYSMPPVLG 377
S G PPP S P APA + P + A GPA A P + S P +
Sbjct: 771 SPGPPPPAS-PPGAPASPRAPRTSPYGGLPAAPLAGPALPARRLSRASRPLSASQPSLPH 829
Query: 378 EAKEGSKRAAPAFSITGR-GKFSEAKGLMPGP 470
A + PA S T R G A+ P P
Sbjct: 830 GAPGPAASTRPASSSTPRLGPTPAARAAAPSP 861
>AC002365-1|AAC32592.1| 1561|Homo sapiens APXL protein.
Length = 1561
Score = 31.1 bits (67), Expect = 2.6
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAFTFGQKLD-PLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVL 374
P+ +PPP R+PR T G D P+ + + P P+ + + A+ ++S P V
Sbjct: 1005 PAPQRPPPPKREPRRYRATDGAPADAPVGVLGRPFPTPSPASLDVYVARLSLSHS-PSVF 1063
Query: 375 GEAKEGSKRAAPAFS-----ITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPAFTMAP 539
A+ A ++G + L+P + + A T R P+ AP
Sbjct: 1064 SSAQPQDTPKATVCERGSQHVSGDASRPLPEALLPPKQQHLRLQTATMETSRSPSPQFAP 1123
Query: 540 R 542
+
Sbjct: 1124 Q 1124
>BC141917-1|AAI41918.1| 198|Homo sapiens PRB1 protein protein.
Length = 198
Score = 30.7 bits (66), Expect = 3.4
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Frame = +3
Query: 198 PSQGKP---PPESRKPRAPAFTFGQKLDPLANIAK-AGPGPASYNTEGMTAKAPNTYSMP 365
P GKP PP+ K R+P G+ P K GP P N + P P
Sbjct: 72 PPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGN-KPQGPLPPGKPQGP 130
Query: 366 PVLGEAKEGSKRAAP 410
P G +K S RA P
Sbjct: 131 PAQGGSKSQSARAPP 145
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 30.3 bits (65), Expect = 4.6
Identities = 26/107 (24%), Positives = 38/107 (35%)
Frame = +3
Query: 204 QGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEA 383
Q +PPP+ P+ P P + + P P +++ + A+ P P +G A
Sbjct: 69 QQQPPPQQPPPQQPP-PHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGP---APGVGSA 124
Query: 384 KEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPA 524
S A PA T G P P T A PP+
Sbjct: 125 PPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPS 171
>D86980-1|BAA13216.1| 336|Homo sapiens KIAA0227 protein.
Length = 336
Score = 30.3 bits (65), Expect = 4.6
Identities = 25/89 (28%), Positives = 31/89 (34%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLG 377
P P P S PR P G + A +AG GPAS A +
Sbjct: 6 PRSASPGPASTGPRHPQVAEGGGRERAARSREAGEGPASEAAAAAAGAASGS-------- 57
Query: 378 EAKEGSKRAAPAFSITGRGKFSEAKGLMP 464
+ GS A GR + EA+G P
Sbjct: 58 SGENGSAGRQTAAGCHGRHEACEARGRRP 86
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 30.3 bits (65), Expect = 4.6
Identities = 26/107 (24%), Positives = 38/107 (35%)
Frame = +3
Query: 204 QGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEA 383
Q +PPP+ P+ P P + + P P +++ + A+ P P +G A
Sbjct: 69 QQQPPPQQPPPQQPP-PHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGP---APGVGSA 124
Query: 384 KEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPA 524
S A PA T G P P T A PP+
Sbjct: 125 PPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPS 171
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 30.3 bits (65), Expect = 4.6
Identities = 26/107 (24%), Positives = 38/107 (35%)
Frame = +3
Query: 204 QGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEA 383
Q +PPP+ P+ P P + + P P +++ + A+ P P +G A
Sbjct: 69 QQQPPPQQPPPQQPP-PHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGP---APGVGSA 124
Query: 384 KEGSKRAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAAAALTKRPPA 524
S A PA T G P P T A PP+
Sbjct: 125 PPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPS 171
>AK026162-1|BAB15380.1| 327|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22509 fis, clone HRC11803. ).
Length = 327
Score = 30.3 bits (65), Expect = 4.6
Identities = 23/93 (24%), Positives = 37/93 (39%)
Frame = +3
Query: 219 PESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSK 398
P+ P + GQ+ L + PG + + G + P S PPVL ++E S+
Sbjct: 171 PQQLTMPLPRYGSGQQPLILPQSIQLPPGQSL--SVGAPRRIPPPGSQPPVLNTSREPSQ 228
Query: 399 RAAPAFSITGRGKFSEAKGLMPGPGTYTTDRAA 497
F + + G +P P TY A+
Sbjct: 229 MEMKGFHFADSKQNVPSGGPVPSPQTYRPSSAS 261
>AF009040-1|AAC51922.1| 1575|Homo sapiens synaptojanin protein.
Length = 1575
Score = 30.3 bits (65), Expect = 4.6
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 3/99 (3%)
Frame = +3
Query: 183 GDNIDPSQGKPPPESRKPRAPAFTFGQKL---DPLANIAKAGPGPASYNTEGMTAKAPNT 353
G PS G E P++P T + P AGPGPA Y+T T P
Sbjct: 1144 GIGAPPSPGVARREMEAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTI-PPRA 1202
Query: 354 YSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGP 470
+ A+ + R P S + + S+ +P P
Sbjct: 1203 GVISAPQSHARASAGRLTPE-SQSKTSETSKGSTFLPEP 1240
>AF009039-1|AAC51921.1| 1311|Homo sapiens synaptojanin protein.
Length = 1311
Score = 30.3 bits (65), Expect = 4.6
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 3/99 (3%)
Frame = +3
Query: 183 GDNIDPSQGKPPPESRKPRAPAFTFGQKL---DPLANIAKAGPGPASYNTEGMTAKAPNT 353
G PS G E P++P T + P AGPGPA Y+T T P
Sbjct: 1144 GIGAPPSPGVARREMEAPKSPGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTI-PPRA 1202
Query: 354 YSMPPVLGEAKEGSKRAAPAFSITGRGKFSEAKGLMPGP 470
+ A+ + R P S + + S+ +P P
Sbjct: 1203 GVISAPQSHARASAGRLTPE-SQSKTSETSKGSTFLPEP 1240
>BX537838-1|CAD97850.1| 1410|Homo sapiens hypothetical protein
protein.
Length = 1410
Score = 29.9 bits (64), Expect = 6.0
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 189 NIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
N+ P P ++ ++ T + + L +A A P PAS T T P ++PP
Sbjct: 872 NMYPPPSFPTNKAATVKSAGATPAEPEELLTPLAPALPSPASTATPPPTPTHPQALALPP 931
Query: 369 VLGEAKE 389
++ E E
Sbjct: 932 LVTEGAE 938
>BC012289-1|AAH12289.1| 326|Homo sapiens KIAA0515 protein protein.
Length = 326
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = +3
Query: 243 PAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSI 422
P + GQ+ L + PG + + G + P S PPVL ++E S+ F
Sbjct: 178 PRYGSGQQPLILPQSIQLPPGQSL--SVGAPRRIPPPGSQPPVLNTSREPSQMEMKGFHF 235
Query: 423 TGRGKFSEAKGLMPGPGTYTTDRAA 497
+ + G +P P TY A+
Sbjct: 236 ADSKQNVPSGGPVPSPQTYRPSSAS 260
>AL358781-1|CAI40214.1| 1535|Homo sapiens KIAA0515 protein.
Length = 1535
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = +3
Query: 243 PAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSI 422
P + GQ+ L + PG + + G + P S PPVL ++E S+ F
Sbjct: 1387 PRYGSGQQPLILPQSIQLPPGQSL--SVGAPRRIPPPGSQPPVLNTSREPSQMEMKGFHF 1444
Query: 423 TGRGKFSEAKGLMPGPGTYTTDRAA 497
+ + G +P P TY A+
Sbjct: 1445 ADSKQNVPSGGPVPSPQTYRPSSAS 1469
>AB011087-1|BAA25441.1| 670|Homo sapiens KIAA0515 protein protein.
Length = 670
Score = 29.9 bits (64), Expect = 6.0
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = +3
Query: 243 PAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSI 422
P + GQ+ L + PG + + G + P S PPVL ++E S+ F
Sbjct: 522 PRYGSGQQPLILPQSIQLPPGQSL--SVGAPRRIPPPGSQPPVLNTSREPSQMEMKGFHF 579
Query: 423 TGRGKFSEAKGLMPGPGTYTTDRAA 497
+ + G +P P TY A+
Sbjct: 580 ADSKQNVPSGGPVPSPQTYRPSSAS 604
>U88666-1|AAC05299.1| 686|Homo sapiens serine kinase SRPK2 protein.
Length = 686
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 189 NIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYS 359
NIDP+ + P + F+ Q+LD + + P P YN + A++ TYS
Sbjct: 371 NIDPTWIESPKTNGHIENGPFSLEQQLDDEDDDEEDCPNPEEYNLDEPNAESDYTYS 427
>DQ421853-1|ABD77575.1| 500|Homo sapiens synaptojanin 1 protein.
Length = 500
Score = 29.5 bits (63), Expect = 8.0
Identities = 24/91 (26%), Positives = 34/91 (37%)
Frame = +3
Query: 198 PSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLG 377
P PP P+ P G+ P AGPGPA Y+T T P +
Sbjct: 91 PRPVAPPTRPAPPQRPPPPSGRS-QPSPQAGLAGPGPAGYSTARPTI-PPRAGVISAPQS 148
Query: 378 EAKEGSKRAAPAFSITGRGKFSEAKGLMPGP 470
A+ + R P S + + S+ +P P
Sbjct: 149 HARASAGRLTPE-SQSKTSETSKGSTFLPEP 178
>BC068547-1|AAH68547.1| 688|Homo sapiens SRPK2 protein protein.
Length = 688
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 189 NIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYS 359
NIDP+ + P + F+ Q+LD + + P P YN + A++ TYS
Sbjct: 372 NIDPTWIESPKTNGHIENGPFSLEQQLDDEDDDEEDCPNPEEYNLDEPNAESDYTYS 428
>BC066365-1|AAH66365.1| 388|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 388
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 224 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 270
>BC035214-1|AAH35214.1| 688|Homo sapiens SFRS protein kinase 2
protein.
Length = 688
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 189 NIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYS 359
NIDP+ + P + F+ Q+LD + + P P YN + A++ TYS
Sbjct: 372 NIDPTWIESPKTNGHIENGPFSLEQQLDDEDDDEEDCPNPEEYNLDEPNAESDYTYS 428
>BC004335-1|AAH04335.2| 216|Homo sapiens SSBP3 protein protein.
Length = 216
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 52 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 98
>BC003605-1|AAH03605.1| 368|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 368
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 204 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 250
>AY700780-1|AAU10087.1| 268|Homo sapiens KIAA0515 protein protein.
Length = 268
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +3
Query: 243 PAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSI 422
P + GQ+ L + PG + + G + P S PPVL ++E S+ +F
Sbjct: 178 PRYGSGQQPLILPQSIQLPPGQSL--SVGAPRRIPPPGSQPPVLNTSREPSQMEMKSFHF 235
Query: 423 TGRGKFSEAKGLMPGPGTY 479
+ + G +P P TY
Sbjct: 236 ADSKQNVPSGGPVPSPQTY 254
>AY354201-1|AAQ63886.1| 546|Homo sapiens SFRS protein kinase 2
isoform c protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 189 NIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYS 359
NIDP+ + P + F+ Q+LD + + P P YN + A++ TYS
Sbjct: 372 NIDPTWIESPKTNGHIENGPFSLEQQLDDEDDDEEDCPNPEEYNLDEPNAESDYTYS 428
>AY026310-2|AAK21985.1| 361|Homo sapiens single stranded DNA
binding protein-3 protein.
Length = 361
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 197 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 243
>AY026310-1|AAK21984.1| 388|Homo sapiens single stranded DNA
binding protein-3 protein.
Length = 388
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 224 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 270
>AL354778-1|CAI22988.1| 283|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 283
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 128 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 174
>AL161644-7|CAI23563.1| 368|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 368
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 204 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 250
>AL161644-6|CAI23562.1| 388|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 388
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 224 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 270
>AL161644-5|CAI23561.1| 169|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 169
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 73 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 119
>AL161644-4|CAI23560.1| 156|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 156
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 55 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 101
>AL161644-3|CAI23559.1| 283|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 283
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 128 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 174
>AL035415-2|CAI22488.1| 368|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 368
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 204 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 250
>AL035415-1|CAI22487.1| 388|Homo sapiens single stranded DNA
binding protein 3 protein.
Length = 388
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 224 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 270
>AK001217-1|BAA91561.1| 278|Homo sapiens protein ( Homo sapiens
cDNA FLJ10355 fis, clone NT2RM2001196. ).
Length = 278
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 114 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 160
>AF500116-1|AAM22101.1| 368|Homo sapiens single-stranded
DNA-binding protein protein.
Length = 368
Score = 29.5 bits (63), Expect = 8.0
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +3
Query: 210 KPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPP 368
+PPP S P P G + P P S N+ ++ +P TY PP
Sbjct: 204 RPPPNSLGPAMPGINMGP------GAGRPWPNPNSANSIPYSSSSPGTYVGPP 250
>AF451977-1|AAL49758.1| 1431|Homo sapiens cask-interacting protein 1
protein.
Length = 1431
Score = 29.5 bits (63), Expect = 8.0
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Frame = +3
Query: 201 SQGKPPPESRKPRAPAFTFGQKLDPLANI--AKAGPGPASYNTEGMTAKAPNTYSMPPVL 374
+ G PPP S KP P T + + +A + AGP PA A PP L
Sbjct: 1263 AHGTPPPVSPKPPPPP-TAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSL 1321
Query: 375 GEA-KEGSKRAAPAFSITGR 431
G + + APA + +
Sbjct: 1322 GASPAKPPSPGAPALHVPAK 1341
>AC005070-2|AAC29140.1| 675|Homo sapiens serine kinase SRPK2
protein.
Length = 675
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 189 NIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYS 359
NIDP+ + P + F+ Q+LD + + P P YN + A++ TYS
Sbjct: 359 NIDPTWIESPKTNGHIENGPFSLEQQLDDEDDDEEDCPNPEEYNLDEPNAESDYTYS 415
>AC005070-1|AAC29141.1| 675|Homo sapiens WUGSC:H_RG152G17.1a
protein.
Length = 675
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 189 NIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAPNTYS 359
NIDP+ + P + F+ Q+LD + + P P YN + A++ TYS
Sbjct: 359 NIDPTWIESPKTNGHIENGPFSLEQQLDDEDDDEEDCPNPEEYNLDEPNAESDYTYS 415
>AB037727-1|BAA92544.1| 1154|Homo sapiens KIAA1306 protein protein.
Length = 1154
Score = 29.5 bits (63), Expect = 8.0
Identities = 23/80 (28%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Frame = +3
Query: 201 SQGKPPPESRKPRAPAFTFGQKLDPLANI--AKAGPGPASYNTEGMTAKAPNTYSMPPVL 374
+ G PPP S KP P T + + +A + AGP PA A PP L
Sbjct: 986 AHGTPPPVSPKPPPPP-TAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSL 1044
Query: 375 GEA-KEGSKRAAPAFSITGR 431
G + + APA + +
Sbjct: 1045 GASPAKPPSPGAPALHVPAK 1064
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,714,622
Number of Sequences: 237096
Number of extensions: 1902791
Number of successful extensions: 8932
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 8409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8891
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5308067764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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