Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d22f
(544 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 0.38
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 1.5
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 2.7
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 3.5
DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein. 22 4.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 4.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.6
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 21 6.1
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 6.1
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 8.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 8.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 8.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 8.1
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.4 bits (53), Expect = 0.38
Identities = 22/85 (25%), Positives = 31/85 (36%)
Frame = +3
Query: 264 KLDPLANIAKAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAAPAFSITGRGKFS 443
K +PL + G A+ N E + PP + E A + + S
Sbjct: 241 KCEPL-ELTGGNSGNAAGNNEDSSDSGAAASDRPPASASSNE---HEAESEHTSTPNFLS 296
Query: 444 EAKGLMPGPGTYTTDRAAAALTKRP 518
EAK P PG++ AA A P
Sbjct: 297 EAKIFPPTPGSFNFSMAALATEHTP 321
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.4 bits (48), Expect = 1.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 291 KAGPGPASYNTEGMTAKAPNTYSMPPVLGEAKEGSKRAA 407
K P A T G+ +K+P P + G+A + +AA
Sbjct: 582 KRRPQRACSTTGGVPSKSPTLTHSPTMYGDALNANLQAA 620
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.6 bits (46), Expect = 2.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 189 CRPRRSYTVNNISSPILICL 130
C P R YT++ + PI L
Sbjct: 144 CHPLRVYTISGLKRPIRFIL 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 3.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 153 KYCLLYTISVGDNIDPSQGKPPPESRKPRAPAFTFGQKLDPLANIA 290
+YCL+ + + P PPP P + + KLD + +IA
Sbjct: 324 EYCLVNIVLGDSDTPPKPAPPPP----PPSSSGPDSAKLDKIFDIA 365
>DQ435338-1|ABD92653.1| 135|Apis mellifera OBP21 protein.
Length = 135
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 156 ISSPILICLNTLTLKSLKI 100
I S I +C+ LTL+ L+I
Sbjct: 6 IISAICVCVGALTLEELQI 24
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -2
Query: 438 TFHDL*Y*KPVQLFYSLLSLHQVPV 364
T H+ Y K +L+Y+++++ Q+PV
Sbjct: 322 TIHNNNYNK--KLYYNIINIEQIPV 344
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -1
Query: 460 INPLASENFPRPVILKAGAALLLPSFASPSTGGIE 356
+ PL+ E RP+I +L LP P +E
Sbjct: 1050 LRPLSMEKGTRPMIPDDNTSLALPKNEGPFRLNVE 1084
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 138 ICLNTLTLKSLKI 100
IC+N +T++ LKI
Sbjct: 12 ICVNAMTIEELKI 24
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -2
Query: 138 ICLNTLTLKSLKI 100
IC+N +T++ LKI
Sbjct: 12 ICVNAMTIEELKI 24
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.1
Identities = 5/14 (35%), Positives = 13/14 (92%)
Frame = -2
Query: 405 QLFYSLLSLHQVPV 364
+L+Y+++++ Q+PV
Sbjct: 111 KLYYNIINIEQIPV 124
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.1
Identities = 5/14 (35%), Positives = 13/14 (92%)
Frame = -2
Query: 405 QLFYSLLSLHQVPV 364
+L+Y+++++ Q+PV
Sbjct: 111 KLYYNIINIEQIPV 124
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 8.1
Identities = 5/14 (35%), Positives = 13/14 (92%)
Frame = -2
Query: 405 QLFYSLLSLHQVPV 364
+L+Y+++++ Q+PV
Sbjct: 322 KLYYNIINIEQIPV 335
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.1
Identities = 5/14 (35%), Positives = 13/14 (92%)
Frame = -2
Query: 405 QLFYSLLSLHQVPV 364
+L+Y+++++ Q+PV
Sbjct: 333 KLYYNIINIEQIPV 346
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 8.1
Identities = 5/14 (35%), Positives = 13/14 (92%)
Frame = -2
Query: 405 QLFYSLLSLHQVPV 364
+L+Y+++++ Q+PV
Sbjct: 351 KLYYNIINIEQIPV 364
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.1
Identities = 5/14 (35%), Positives = 13/14 (92%)
Frame = -2
Query: 405 QLFYSLLSLHQVPV 364
+L+Y+++++ Q+PV
Sbjct: 335 KLYYNIINIEQIPV 348
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 8.1
Identities = 5/14 (35%), Positives = 13/14 (92%)
Frame = -2
Query: 405 QLFYSLLSLHQVPV 364
+L+Y+++++ Q+PV
Sbjct: 353 KLYYNIINIEQIPV 366
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,523
Number of Sequences: 438
Number of extensions: 3580
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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