Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d20r
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.7  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 40  LLFFYKYLLLNCFIRFNFNSITFILLFVIF 129
           +LF    LLL C   F +  + F   F+IF
Sbjct: 246 ILFTVHLLLLVCIYYFYYMHLLFCCAFIIF 275



 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 46  FFYKYLLLNC-FIRFNFNSITFILLFVIFY 132
           F+Y +LL  C FI F  + + F+L    FY
Sbjct: 261 FYYMHLLFCCAFIIFTMH-LLFLLCIYYFY 289


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
 Frame = +2

Query: 614 VERNFLTSRDPPKSPLKSLRKRP-PFY*DY----IIFHPITXHISFHARFI 751
           + +  L     PK PL  L K P P    Y    II  PI+ H SF +RF+
Sbjct: 32  LNKYLLVKHSKPKMPL--LPKTPLPLTLLYKLLGIIQFPISAHFSFMSRFL 80


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 701 IIFHPITXHISFHARFI 751
           II  PI+ H SF +RF+
Sbjct: 20  IIQFPISAHFSFMSRFL 36


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 187 TCCQLNFTLCLLADYKN 137
           T   L+F L LLA++KN
Sbjct: 1   TSAALSFALMLLANHKN 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,636
Number of Sequences: 336
Number of extensions: 3584
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)