Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d20f
(574 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 29 8.8
U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein. 29 8.8
U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein. 29 8.8
AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein. 29 8.8
AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein. 29 8.8
AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein. 29 8.8
AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein. 29 8.8
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 29 8.8
AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein. 29 8.8
AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein. 29 8.8
AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein. 29 8.8
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 717 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 762
>U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 607 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 652
>U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 607 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 652
>AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein.
Length = 4547
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 580 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 625
>AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein.
Length = 4551
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 584 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 629
>AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein.
Length = 4547
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 580 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 625
>AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein.
Length = 4515
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 548 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 593
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 717 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 762
>AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein.
Length = 4525
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 558 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 603
>AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein.
Length = 4533
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 566 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 611
>AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein.
Length = 4574
Score = 29.5 bits (63), Expect = 8.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 342 GQLSAIFRKLFSDCKGLFDLEMIEICLECEAMLKRIDDFYNRVQRA 479
GQLS R + DC G DL+ ++ +A L+ ++ ++ V A
Sbjct: 607 GQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHSFVAAA 652
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,063,033
Number of Sequences: 237096
Number of extensions: 1530138
Number of successful extensions: 2762
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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