Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d19f
(573 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O15498 Cluster: Synaptobrevin homolog YKT6; n=35; Eumet... 131 1e-29
UniRef50_Q9TXZ9 Cluster: Putative uncharacterized protein; n=4; ... 109 5e-23
UniRef50_O60073 Cluster: Synaptobrevin homolog ykt6; n=4; Fungi/... 107 1e-22
UniRef50_Q5DDT8 Cluster: SJCHGC05685 protein; n=3; Bilateria|Rep... 107 2e-22
UniRef50_P36015 Cluster: Synaptobrevin homolog YKT6; n=7; Saccha... 98 1e-19
UniRef50_Q6BSL0 Cluster: Synaptobrevin homolog YKT6; n=19; Ascom... 97 3e-19
UniRef50_UPI00005A965B Cluster: PREDICTED: similar to SNARE prot... 83 6e-15
UniRef50_Q5K9S1 Cluster: Putative uncharacterized protein; n=2; ... 83 6e-15
UniRef50_Q9ZRD6 Cluster: VAMP-like protein YKT61; n=2; Viridipla... 81 2e-14
UniRef50_A7PRF3 Cluster: Chromosome chr14 scaffold_27, whole gen... 77 3e-13
UniRef50_Q54ES8 Cluster: Putative uncharacterized protein; n=1; ... 69 6e-11
UniRef50_A4HYF0 Cluster: Vesicle-associated membrane protein; n=... 68 1e-10
UniRef50_Q0ZAG4 Cluster: SNARE protein; n=7; Plasmodium|Rep: SNA... 59 8e-08
UniRef50_Q54BK5 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q0V1J8 Cluster: Putative uncharacterized protein; n=1; ... 56 8e-07
UniRef50_UPI00006D0055 Cluster: hypothetical protein TTHERM_0077... 52 1e-05
UniRef50_Q3SEQ5 Cluster: Synaptobrevin 7-1; n=2; Paramecium tetr... 51 2e-05
UniRef50_Q0ZAF8 Cluster: SNARE protein; n=4; Plasmodium|Rep: SNA... 51 2e-05
UniRef50_UPI0000498DF0 Cluster: isoprenylated v-SNARE protein; n... 45 0.001
UniRef50_Q5CXM1 Cluster: Synaptobrevin/VAMP-like protein; n=2; C... 44 0.003
UniRef50_Q1EPZ1 Cluster: V-SNARE protein VampA; n=1; Entamoeba h... 38 0.22
UniRef50_Q8SW56 Cluster: Putative uncharacterized protein ECU03_... 36 0.51
UniRef50_A0CXN6 Cluster: Chromosome undetermined scaffold_30, wh... 36 0.68
UniRef50_Q5CSD5 Cluster: MRNA 3' end processing protein RNA14, H... 34 2.7
UniRef50_UPI0000499331 Cluster: dolichol monophosphate mannose s... 33 4.8
UniRef50_Q0J6J6 Cluster: Os08g0307300 protein; n=2; Oryza sativa... 33 4.8
UniRef50_Q7R452 Cluster: GLP_254_29935_28196; n=1; Giardia lambl... 32 8.3
UniRef50_Q54J31 Cluster: Putative uncharacterized protein; n=1; ... 32 8.3
>UniRef50_O15498 Cluster: Synaptobrevin homolog YKT6; n=35;
Eumetazoa|Rep: Synaptobrevin homolog YKT6 - Homo sapiens
(Human)
Length = 198
Score = 131 bits (317), Expect = 1e-29
Identities = 63/105 (60%), Positives = 82/105 (78%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y+L VLYKG +LK AYD+ SFS+FQRSSVQEFMTF S+ +VER+ +R SVK
Sbjct: 1 MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
E +Y+ VYVR D+LAGV+I+D+EYP+RVA TL+ K LDEF+ V
Sbjct: 61 EQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQV 105
>UniRef50_Q9TXZ9 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 201
Score = 109 bits (262), Expect = 5e-23
Identities = 51/110 (46%), Positives = 76/110 (69%), Gaps = 2/110 (1%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASI--LKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQS 416
+K+Y++LV +K ++ + + K DL SFS+FQR SVQEFMTF +K +VER+ +R S
Sbjct: 1 MKLYSILVFHKNVDTSDVKLFKSECDLSSFSFFQRGSVQEFMTFTAKLLVERSGLGARSS 60
Query: 417 VKEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVPSS 566
VKE EY++ YVR D L+ V ++D EY RVA + + + LD+FT VP++
Sbjct: 61 VKENEYLVHCYVRNDGLSAVCVTDAEYQQRVAMSFLGRVLDDFTTRVPAT 110
>UniRef50_O60073 Cluster: Synaptobrevin homolog ykt6; n=4;
Fungi/Metazoa group|Rep: Synaptobrevin homolog ykt6 -
Schizosaccharomyces pombe (Fission yeast)
Length = 197
Score = 107 bits (258), Expect = 1e-22
Identities = 52/106 (49%), Positives = 70/106 (66%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y++ +L +L A DL SFS+FQRSS+ EFM F +KT+ ERT+P RQ V+
Sbjct: 1 MKLYSVSILRFDPKPVQLLCTASDLSSFSFFQRSSIGEFMNFFTKTVAERTNPGQRQDVE 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVP 560
+ Y+ VY R+D L GV+ SD EYP RVA+TL+ K LDEF P
Sbjct: 61 QSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTKNP 106
>UniRef50_Q5DDT8 Cluster: SJCHGC05685 protein; n=3; Bilateria|Rep:
SJCHGC05685 protein - Schistosoma japonicum (Blood
fluke)
Length = 198
Score = 107 bits (257), Expect = 2e-22
Identities = 50/109 (45%), Positives = 71/109 (65%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+ AL +LYK +A++L+ AYDL+ YFQR ++ + + F SK + ERT R ++
Sbjct: 1 MKLLALQILYKTDTSANLLQSAYDLKDIGYFQRPALMQLINFSSKLVCERTGRCQRALIR 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVPSST 569
E Y+ VYVR DNL GVLI D EYP RVA TL+TK ++F+ P+ T
Sbjct: 61 EKIYVCHVYVRHDNLCGVLICDEEYPERVAQTLLTKATEDFSTQYPADT 109
>UniRef50_P36015 Cluster: Synaptobrevin homolog YKT6; n=7;
Saccharomycetales|Rep: Synaptobrevin homolog YKT6 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 200
Score = 98.3 bits (234), Expect = 1e-19
Identities = 47/106 (44%), Positives = 67/106 (63%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+++Y + V G A L DL F +F+RSSV +FMTF ++T+ RT RQS++
Sbjct: 1 MRIYYIGVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAGQRQSIE 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVP 560
EG Y+ VY R++ + GVLI+D EYP R A+TL+ K LDE+ A P
Sbjct: 61 EGNYIGHVYARSEGICGVLITDKEYPVRPAYTLLNKILDEYLVAHP 106
>UniRef50_Q6BSL0 Cluster: Synaptobrevin homolog YKT6; n=19;
Ascomycota|Rep: Synaptobrevin homolog YKT6 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 200
Score = 97.1 bits (231), Expect = 3e-19
Identities = 47/106 (44%), Positives = 69/106 (65%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y + +L G A L A DL FS+F+R+ V +FMTF S+T+ +RT RQS++
Sbjct: 1 MKIYYIGILRIGGEKALELTSARDLSQFSFFERNGVSQFMTFFSETVSQRTQAGQRQSIE 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVP 560
EG Y+ Y R++ LA V+I+D EYP R A+TLI K L+E+ + P
Sbjct: 61 EGNYIGHTYTRSEGLACVIITDKEYPVRPAYTLINKILEEYLSLHP 106
>UniRef50_UPI00005A965B Cluster: PREDICTED: similar to SNARE protein
Ykt6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to SNARE protein Ykt6 - Canis familiaris
Length = 112
Score = 82.6 bits (195), Expect = 6e-15
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +3
Query: 345 SVQEFMTFVSKTMVERTHPASRQSVKEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLI 524
SVQEFMTF S+ +VER+ SR SVKE EY+ VYVR D+LAGV+I+D EYP+RVA TL+
Sbjct: 6 SVQEFMTFTSQLIVERSAKGSRASVKEQEYLCHVYVRNDSLAGVVIADSEYPSRVAFTLL 65
Query: 525 TK 530
K
Sbjct: 66 EK 67
>UniRef50_Q5K9S1 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 233
Score = 82.6 bits (195), Expect = 6e-15
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 6/115 (5%)
Frame = +3
Query: 237 KMVKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQS 416
K+ + L V A++L A DL SF+++QRSSV EF+TF +KT+ ERT S
Sbjct: 2 KVFSISLLAVAQTAPPTATLLGTAQDLSSFTFYQRSSVGEFLTFFTKTVAERTPANQPSS 61
Query: 417 VKEGEYMLQVYVRA------DNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVPS 563
V+E + V+V A LA V+I+D EYP R A +L+TK LDE TA + S
Sbjct: 62 VEENNHKAHVFVTAGRTPGGPGLAAVMITDLEYPLRPAFSLLTKILDEHTALLAS 116
>UniRef50_Q9ZRD6 Cluster: VAMP-like protein YKT61; n=2;
Viridiplantae|Rep: VAMP-like protein YKT61 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 199
Score = 80.6 bits (190), Expect = 2e-14
Identities = 48/104 (46%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Frame = +3
Query: 243 VKVYALLVLYKGINNAS---ILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQ 413
+K+ ALLVL K AS IL A D+ F YFQRSSV+EF+ FV +T+ RT P+ RQ
Sbjct: 1 MKITALLVL-KCAPEASDPVILSNASDVSHFGYFQRSSVKEFVVFVGRTVASRTPPSQRQ 59
Query: 414 SVKEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEF 545
SV+ EY + Y R + L V D YP R A +L+ + LDE+
Sbjct: 60 SVQHEEYKVHAYNR-NGLCAVGFMDDHYPVRSAFSLLNQVLDEY 102
>UniRef50_A7PRF3 Cluster: Chromosome chr14 scaffold_27, whole genome
shotgun sequence; n=4; Viridiplantae|Rep: Chromosome
chr14 scaffold_27, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 224
Score = 77.0 bits (181), Expect = 3e-13
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Frame = +3
Query: 243 VKVYALLVL-YKGIN-NASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQS 416
+K+ ALLV+ ++G + + IL A D+ F YFQRS +EF+ FV +T+ +RT PA RQS
Sbjct: 1 MKITALLVMKWQGDSIDPVILANACDVSQFGYFQRSGAKEFIVFVGRTVAKRTPPAQRQS 60
Query: 417 VKEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEF 545
V+ EY + Y R + L + D YP R A +L+ K L+E+
Sbjct: 61 VQHQEYKVHSYNR-NGLCALGFMDDNYPVRSAFSLLNKVLEEY 102
>UniRef50_Q54ES8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 202
Score = 69.3 bits (162), Expect = 6e-11
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Frame = +3
Query: 243 VKVYALLVLYKGI--NNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQS 416
+KVY++ L+K + N +L Y+L SF +FQR SV+E FVS+ V RT+ R S
Sbjct: 1 MKVYSI-GLFKVVPGNKPVLLNIVYELSSFGFFQRGSVKEVSLFVSRETVGRTNVGERVS 59
Query: 417 VKEGEYMLQVYVRADN--LAGVLISDHEYPNRVAHTLITKTLDEFTAAVPSS 566
++ + + D+ L +++D EYP RVAHTLI L+EF P S
Sbjct: 60 MEHTQTQKVCHTTVDSKGLGCSVLTDSEYPGRVAHTLIRICLEEFYKVHPES 111
>UniRef50_A4HYF0 Cluster: Vesicle-associated membrane protein; n=6;
Trypanosomatidae|Rep: Vesicle-associated membrane
protein - Leishmania infantum
Length = 261
Score = 68.1 bits (159), Expect = 1e-10
Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
Frame = +3
Query: 231 LTKMVKVYALLVLYK---GINNASILK-GAYDLRSFSYFQRSSVQEFMTFVSKTMVERTH 398
L ++K+Y LL+L G+ ++ A D+ SF +FQRSS +EF+ F+S+T+ +R
Sbjct: 53 LRYIMKLYGLLILKPHPPGVEKDPVICCSAVDVSSFGFFQRSSAREFIVFLSRTVAKRVA 112
Query: 399 PASRQSVKEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEF 545
++ + E ++ + D L + +SD EY RVA TL+T+ + +F
Sbjct: 113 LGAKTQITENGNVVYAHATLDGLVAIAVSDIEYNARVAFTLLTELMLQF 161
>UniRef50_Q0ZAG4 Cluster: SNARE protein; n=7; Plasmodium|Rep: SNARE
protein - Plasmodium falciparum
Length = 221
Score = 58.8 bits (136), Expect = 8e-08
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Frame = +3
Query: 210 RPSDKNYLTKMVKVYALLVL-YKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMV 386
R N +K + +Y++L+ Y+ N L A DL SF +F RSS++E + F ++ +
Sbjct: 6 RDMSNNENSKKIALYSILIYKYESSNQPIFLTSALDLSSFPFFHRSSLKEHIYFHARLVC 65
Query: 387 ERTHPASRQSVK--EGEYMLQVYVRADNLAGVLI-SDHEYPNRVAHTLITKT 533
RT +R+ ++ G L +Y +N VL+ S YP R+A +LI T
Sbjct: 66 GRTQKGTREVIELESGIGHLHIYTNKENNISVLVLSTSSYPLRIAFSLIDLT 117
>UniRef50_Q54BK5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 187
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/96 (30%), Positives = 54/96 (56%)
Frame = +3
Query: 258 LLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGEYM 437
L+ + +L+ A DL F +F++ +V+E + SK + + P +R SV +Y+
Sbjct: 3 LVAMVLAKRKGDLLEIACDLSQFGFFEKGTVKEVIIAASKIFINKFDPNTRHSVPYEDYI 62
Query: 438 LQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEF 545
+ VRA+ GV+ +D EYP RVA L+++ ++ +
Sbjct: 63 CFIDVRAE-FGGVVFTDKEYPERVAARLLSEMMNGY 97
>UniRef50_Q0V1J8 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 209
Score = 55.6 bits (128), Expect = 8e-07
Identities = 31/93 (33%), Positives = 49/93 (52%)
Frame = +3
Query: 288 ASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGEYMLQVYVRADNL 467
A L A +++S +YF R++V +F+TF + T+ R P + V E + V + +
Sbjct: 26 ADELAAATNVKSLNYFARATVAQFITFTAATIAARQAP-GKAIVNEKDAAFHVLANSAGV 84
Query: 468 AGVLISDHEYPNRVAHTLITKTLDEFTAAVPSS 566
V ++ EY RVA +L+ K LDEF P S
Sbjct: 85 CVVAATNDEYNARVAQSLLRKVLDEFITKYPPS 117
>UniRef50_UPI00006D0055 Cluster: hypothetical protein
TTHERM_00773190; n=2; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00773190 - Tetrahymena
thermophila SB210
Length = 201
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+++ ++ VL N L AY+L S++QR +E + F +TM R R V+
Sbjct: 1 MRLISMHVLKWDPENPIFLSSAYELGFISWYQRPFFKETLNFGVRTMTARVQKGDRTVVQ 60
Query: 423 EGEYMLQVYVRADN-LAGVLISDHEYPNRVAHTLITKTLDEF 545
E YV N +A V++ D EYP + +I + EF
Sbjct: 61 LDEAKAMAYVVVSNDIAVVIVCDEEYPQKTPFVIIREVFSEF 102
>UniRef50_Q3SEQ5 Cluster: Synaptobrevin 7-1; n=2; Paramecium
tetraurelia|Rep: Synaptobrevin 7-1 - Paramecium
tetraurelia
Length = 202
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+++ A+ +L N + Y+L ++FQR +E + F ++T R P +R +V
Sbjct: 1 MRIIAMYLLKYHPENPLFVSQNYELSFVNWFQRPFFKETLNFGARTCAARAKPGTRCAVT 60
Query: 423 EGEYMLQVYVRAD--NLAGVLISDHEYPNRVAHTLITKTLDEF 545
E Y+ D NLA ++I+D +YP +VA +I E+
Sbjct: 61 NQEAHAVSYICIDKNNLAALVIADDQYPEKVAFMVIQNMYQEY 103
>UniRef50_Q0ZAF8 Cluster: SNARE protein; n=4; Plasmodium|Rep: SNARE
protein - Plasmodium falciparum
Length = 199
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/100 (24%), Positives = 52/100 (52%)
Frame = +3
Query: 261 LVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGEYML 440
+ L K + + L A DL S+S+ ++ + +E FV++T+ R +++ + +
Sbjct: 6 IFLTKYVEDVIFLCNATDLNSYSFIKKKAFKEAAFFVARTIPSRIEYNTKEIITHENNTV 65
Query: 441 QVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAVP 560
+ DN+ ++I+ +YP RVA +I + +F + +P
Sbjct: 66 FAFKYEDNICPIVIATDDYPERVAFYMINEIYRDFISTIP 105
>UniRef50_UPI0000498DF0 Cluster: isoprenylated v-SNARE protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: isoprenylated
v-SNARE protein - Entamoeba histolytica HM-1:IMSS
Length = 207
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Frame = +3
Query: 240 MVKVYALLVLY-KGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQS 416
M ++YAL V++ + + IL DL F FQ ++++EF+ F M +R R
Sbjct: 1 MARLYALTVIHIEDDSKTKILYCKSDLGCFGLFQSNTIKEFIRFGFIEMSQRCERDKRMV 60
Query: 417 VKEGEY---MLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEF 545
+K EY + + V+ D L ++++ +YP +I ++ + F
Sbjct: 61 IKSNEYGGVLFNLLVKPDGLGIGILTNLDYPKNTITYIIHRSFELF 106
>UniRef50_Q5CXM1 Cluster: Synaptobrevin/VAMP-like protein; n=2;
Cryptosporidium|Rep: Synaptobrevin/VAMP-like protein -
Cryptosporidium parvum Iowa II
Length = 225
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Frame = +3
Query: 261 LVLYKGINNASILKGA-YDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGEYM 437
++LYK IL + Y+L+ +++FQR ++QE + F S+ + R +R +V + +
Sbjct: 6 VLLYKWDKEHPILLTSNYNLQDYNFFQRKTIQEHIAFHSRLLCSRVQQGNRVTVTFPQDI 65
Query: 438 --LQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEF 545
+Y+ + L I+ +YP R A +L+ + L +
Sbjct: 66 GHCHIYISNNGLGICCITSPDYPVRCAFSLLNEYLKTY 103
>UniRef50_Q1EPZ1 Cluster: V-SNARE protein VampA; n=1; Entamoeba
histolytica|Rep: V-SNARE protein VampA - Entamoeba
histolytica
Length = 208
Score = 37.5 bits (83), Expect = 0.22
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +3
Query: 312 DLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGE---YMLQVYVRADNLAGVLI 482
D +F+R + + + F ++ + +R R + E + VY+ D LA V I
Sbjct: 33 DFSQMGFFERMNAEGPLKFSARQIAQRAITNKRMCITLQEPSTFKGHVYMENDGLAVVAI 92
Query: 483 SDHEYPNRVAHTLITKTLDEF 545
+ YP+RVA +++K + F
Sbjct: 93 TTKSYPDRVATVVLSKMMQAF 113
>UniRef50_Q8SW56 Cluster: Putative uncharacterized protein
ECU03_0530; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU03_0530 - Encephalitozoon
cuniculi
Length = 176
Score = 36.3 bits (80), Expect = 0.51
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Frame = +3
Query: 249 VYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSV--- 419
+ +L+V+ ++ + A+ L FS+F R V+E + F+SK + E+ Q
Sbjct: 3 IISLVVI--NVHTRKVKAKAFSLGQFSFFTRGKVRETLMFISKELAEKLETYEFQEYTHE 60
Query: 420 --KEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLI 524
+ Y L V D LA + +D +YP VA L+
Sbjct: 61 FNDKKTYRLFSLVHND-LAYIACADDDYPGIVALKLL 96
>UniRef50_A0CXN6 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_30,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 212
Score = 35.9 bits (79), Expect = 0.68
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Frame = +3
Query: 240 MVKVYALLVLYKGINNASI-LKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPAS--- 407
M + L+ Y + I L Y+L S F R++V++ M F+ + V +
Sbjct: 1 MQLIAVLIAAYNAVEKKVIMLTRYYELNSIGIFYRNTVKDSMKFICRESVIGLDKGTWQF 60
Query: 408 -----RQSVK-EGEYM-LQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
R SV E +Y +Q+ +D L D +YP R+A + L EF V
Sbjct: 61 MQLILRHSVMHEDKYCHIQMGYGSDKLEVYAFCDQDYPKRIAFAFLNVVLQEFQKKV 117
>UniRef50_Q5CSD5 Cluster: MRNA 3' end processing protein RNA14, HAT
repeats; n=2; Cryptosporidium|Rep: MRNA 3' end processing
protein RNA14, HAT repeats - Cryptosporidium parvum Iowa
II
Length = 1452
Score = 33.9 bits (74), Expect = 2.7
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 279 INNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVE 389
+NN ILK D+R F+Y+ ++ + F T + K +V+
Sbjct: 1201 VNNGDILKNIEDMRDFNYYMENTNKSFNTLLPKGIVD 1237
>UniRef50_UPI0000499331 Cluster: dolichol monophosphate mannose
synthase; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
dolichol monophosphate mannose synthase - Entamoeba
histolytica HM-1:IMSS
Length = 353
Score = 33.1 bits (72), Expect = 4.8
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 26 VKNHFLRFHEEKLSYKCIKIILRLLSDFG*SNIVARPRLYKRKIHSEGSFTTN*TTSY 199
VK+ L+ KL K KI+L +L G N+V P ++ ++H E T T+Y
Sbjct: 160 VKSSILK--RSKLEAKGYKILLEVLVKTGAKNVVEVPIIFTTRVHGESKLTGGVMTNY 215
>UniRef50_Q0J6J6 Cluster: Os08g0307300 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os08g0307300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 267
Score = 33.1 bits (72), Expect = 4.8
Identities = 23/102 (22%), Positives = 47/102 (46%)
Frame = +3
Query: 240 MVKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSV 419
MVK+ + + G+ L DL+ ++++ + F K + + H ASR S+
Sbjct: 1 MVKLTMIARVTDGLPLVEGLDDGRDLKDADFYKQQAKLLF-----KNLSKGQHEASRMSI 55
Query: 420 KEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEF 545
+ G Y+++ + + + DH YP ++A + +EF
Sbjct: 56 ETGPYIIE-----GRVCYLTMCDHSYPKKLAFQYLEDLKNEF 92
>UniRef50_Q7R452 Cluster: GLP_254_29935_28196; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_29935_28196 - Giardia lamblia
ATCC 50803
Length = 579
Score = 32.3 bits (70), Expect = 8.3
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 354 EFMT---FVSKTMVERTHPASRQSVKEGEYMLQVYVRADNLAGVLISDHEYP 500
EFM FVS ++ERT PA + +G+Y L Y D GV IS+ P
Sbjct: 511 EFMAGGDFVSGIVLERTKPAQQAQPSQGDYTLDNY--GDLSLGVTISNDTQP 560
>UniRef50_Q54J31 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 907
Score = 32.3 bits (70), Expect = 8.3
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 8 NNQGQIVK-NHFLRFHEEKLSYKCIKIILRLLSDFG*SNIVARP 136
+N +I+K N++L+F +KL Y CIKII +S+F I++ P
Sbjct: 317 DNDDEIIKINNYLKFAIKKLEYGCIKII---VSNFNKDGILSIP 357
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,184,627
Number of Sequences: 1657284
Number of extensions: 8075554
Number of successful extensions: 17389
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 17034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17380
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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