Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d19f
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   1.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.9  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 30  KITFYDFTKKNYLTNVLK 83
           ++TF D T  +YL NV K
Sbjct: 230 RLTFVDKTASDYLINVFK 247


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 327 SYFQRSSVQEFMTFVS 374
           SYF+ S  + F TFV+
Sbjct: 33  SYFRLSKAKSFCTFVA 48


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -2

Query: 452 HIHLQHILSFLN*LP*CWMCPLYHSFTNKSHKFLH 348
           H H Q    +++ +P    CP++   T + H  +H
Sbjct: 136 HGHHQKNSPYMDGVPFVTQCPIHPGMTFRYHFNVH 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,636
Number of Sequences: 336
Number of extensions: 2294
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)