Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11d19f
(573 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U95735-1|AAB81131.1| 198|Homo sapiens SNARE protein Ykt6 protein. 131 1e-30
CR456989-1|CAG33270.1| 198|Homo sapiens YKT6 protein. 131 1e-30
BT007078-1|AAP35741.1| 198|Homo sapiens SNARE protein Ykt6 prot... 131 1e-30
BC007319-1|AAH07319.1| 198|Homo sapiens YKT6 v-SNARE homolog (S... 131 1e-30
AK223488-1|BAD97208.1| 198|Homo sapiens SNARE protein Ykt6 vari... 131 1e-30
AF091079-1|AAC72948.1| 191|Homo sapiens SNARE protein Ykt6 prot... 131 1e-30
CR542008-1|CAG46805.1| 198|Homo sapiens YKT6 protein. 130 3e-30
>U95735-1|AAB81131.1| 198|Homo sapiens SNARE protein Ykt6 protein.
Length = 198
Score = 131 bits (317), Expect = 1e-30
Identities = 63/105 (60%), Positives = 82/105 (78%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y+L VLYKG +LK AYD+ SFS+FQRSSVQEFMTF S+ +VER+ +R SVK
Sbjct: 1 MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
E +Y+ VYVR D+LAGV+I+D+EYP+RVA TL+ K LDEF+ V
Sbjct: 61 EQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQV 105
>CR456989-1|CAG33270.1| 198|Homo sapiens YKT6 protein.
Length = 198
Score = 131 bits (317), Expect = 1e-30
Identities = 63/105 (60%), Positives = 82/105 (78%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y+L VLYKG +LK AYD+ SFS+FQRSSVQEFMTF S+ +VER+ +R SVK
Sbjct: 1 MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
E +Y+ VYVR D+LAGV+I+D+EYP+RVA TL+ K LDEF+ V
Sbjct: 61 EQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQV 105
>BT007078-1|AAP35741.1| 198|Homo sapiens SNARE protein Ykt6
protein.
Length = 198
Score = 131 bits (317), Expect = 1e-30
Identities = 63/105 (60%), Positives = 82/105 (78%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y+L VLYKG +LK AYD+ SFS+FQRSSVQEFMTF S+ +VER+ +R SVK
Sbjct: 1 MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
E +Y+ VYVR D+LAGV+I+D+EYP+RVA TL+ K LDEF+ V
Sbjct: 61 EQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQV 105
>BC007319-1|AAH07319.1| 198|Homo sapiens YKT6 v-SNARE homolog (S.
cerevisiae) protein.
Length = 198
Score = 131 bits (317), Expect = 1e-30
Identities = 63/105 (60%), Positives = 82/105 (78%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y+L VLYKG +LK AYD+ SFS+FQRSSVQEFMTF S+ +VER+ +R SVK
Sbjct: 1 MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
E +Y+ VYVR D+LAGV+I+D+EYP+RVA TL+ K LDEF+ V
Sbjct: 61 EQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQV 105
>AK223488-1|BAD97208.1| 198|Homo sapiens SNARE protein Ykt6 variant
protein.
Length = 198
Score = 131 bits (317), Expect = 1e-30
Identities = 63/105 (60%), Positives = 82/105 (78%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y+L VLYKG +LK AYD+ SFS+FQRSSVQEFMTF S+ +VER+ +R SVK
Sbjct: 1 MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
E +Y+ VYVR D+LAGV+I+D+EYP+RVA TL+ K LDEF+ V
Sbjct: 61 EQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQV 105
>AF091079-1|AAC72948.1| 191|Homo sapiens SNARE protein Ykt6
protein.
Length = 191
Score = 131 bits (317), Expect = 1e-30
Identities = 63/105 (60%), Positives = 82/105 (78%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y+L VLYKG +LK AYD+ SFS+FQRSSVQEFMTF S+ +VER+ +R SVK
Sbjct: 1 MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
E +Y+ VYVR D+LAGV+I+D+EYP+RVA TL+ K LDEF+ V
Sbjct: 61 EQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQV 105
>CR542008-1|CAG46805.1| 198|Homo sapiens YKT6 protein.
Length = 198
Score = 130 bits (315), Expect = 3e-30
Identities = 63/105 (60%), Positives = 81/105 (77%)
Frame = +3
Query: 243 VKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVK 422
+K+Y+L VLYKG +LK AYD+ SFS+FQRSSVQEFMTF S+ +VER+ +R SVK
Sbjct: 1 MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK 60
Query: 423 EGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
E Y+ VYVR D+LAGV+I+D+EYP+RVA TL+ K LDEF+ V
Sbjct: 61 EQNYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQV 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,042,789
Number of Sequences: 237096
Number of extensions: 1152827
Number of successful extensions: 6171
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6171
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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