Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d19f
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY059454-1|AAL13360.1|  199|Drosophila melanogaster LD34211p pro...   155   3e-38
AE014298-1086|AAF46294.1|  199|Drosophila melanogaster CG1515-PA...   155   3e-38
U57314-1|AAB49926.1|  624|Drosophila melanogaster LAMA protein.        29   4.5  
BT001475-1|AAN71230.1|  658|Drosophila melanogaster LD13253p pro...    29   4.5  
AE014296-945|AAN12118.2|  658|Drosophila melanogaster CG10645-PC...    29   4.5  
AE014296-944|AAF50787.3|  658|Drosophila melanogaster CG10645-PB...    29   4.5  
AE014296-943|AAG22333.2|  658|Drosophila melanogaster CG10645-PA...    29   4.5  

>AY059454-1|AAL13360.1|  199|Drosophila melanogaster LD34211p
           protein.
          Length = 199

 Score =  155 bits (377), Expect = 3e-38
 Identities = 74/106 (69%), Positives = 88/106 (83%)
 Frame = +3

Query: 240 MVKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSV 419
           MVK++AL + +KG + A +LK A DL+SFS+FQR +V EFMTF SKT+VERT PA RQSV
Sbjct: 1   MVKLFALSIFHKGASEARLLKTASDLQSFSFFQRGTVNEFMTFASKTIVERTQPALRQSV 60

Query: 420 KEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
           K+  YM  VYVRADNLAGVLI+DHEYP+RVAHTLITK LD+FTA V
Sbjct: 61  KQDAYMCHVYVRADNLAGVLIADHEYPHRVAHTLITKILDDFTAKV 106


>AE014298-1086|AAF46294.1|  199|Drosophila melanogaster CG1515-PA
           protein.
          Length = 199

 Score =  155 bits (377), Expect = 3e-38
 Identities = 74/106 (69%), Positives = 88/106 (83%)
 Frame = +3

Query: 240 MVKVYALLVLYKGINNASILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSV 419
           MVK++AL + +KG + A +LK A DL+SFS+FQR +V EFMTF SKT+VERT PA RQSV
Sbjct: 1   MVKLFALSIFHKGASEARLLKTASDLQSFSFFQRGTVNEFMTFASKTIVERTQPALRQSV 60

Query: 420 KEGEYMLQVYVRADNLAGVLISDHEYPNRVAHTLITKTLDEFTAAV 557
           K+  YM  VYVRADNLAGVLI+DHEYP+RVAHTLITK LD+FTA V
Sbjct: 61  KQDAYMCHVYVRADNLAGVLIADHEYPHRVAHTLITKILDDFTAKV 106


>U57314-1|AAB49926.1|  624|Drosophila melanogaster LAMA protein.
          Length = 624

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 291 SILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGE 431
           SI  G  DL+ FSY  R  + +F  F     +   H   R    EG+
Sbjct: 492 SIAYGNIDLKLFSYNARLGISDFHAFAGPVFLRFQHTQPRTLEDEGQ 538


>BT001475-1|AAN71230.1|  658|Drosophila melanogaster LD13253p
           protein.
          Length = 658

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 291 SILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGE 431
           SI  G  DL+ FSY  R  + +F  F     +   H   R    EG+
Sbjct: 526 SIAYGNIDLKLFSYNARLGISDFHAFAGPVFLRFQHTQPRTLEDEGQ 572


>AE014296-945|AAN12118.2|  658|Drosophila melanogaster CG10645-PC,
           isoform C protein.
          Length = 658

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 291 SILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGE 431
           SI  G  DL+ FSY  R  + +F  F     +   H   R    EG+
Sbjct: 526 SIAYGNIDLKLFSYNARLGISDFHAFAGPVFLRFQHTQPRTLEDEGQ 572


>AE014296-944|AAF50787.3|  658|Drosophila melanogaster CG10645-PB,
           isoform B protein.
          Length = 658

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 291 SILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGE 431
           SI  G  DL+ FSY  R  + +F  F     +   H   R    EG+
Sbjct: 526 SIAYGNIDLKLFSYNARLGISDFHAFAGPVFLRFQHTQPRTLEDEGQ 572


>AE014296-943|AAG22333.2|  658|Drosophila melanogaster CG10645-PA,
           isoform A protein.
          Length = 658

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +3

Query: 291 SILKGAYDLRSFSYFQRSSVQEFMTFVSKTMVERTHPASRQSVKEGE 431
           SI  G  DL+ FSY  R  + +F  F     +   H   R    EG+
Sbjct: 526 SIAYGNIDLKLFSYNARLGISDFHAFAGPVFLRFQHTQPRTLEDEGQ 572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,187,337
Number of Sequences: 53049
Number of extensions: 377784
Number of successful extensions: 820
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)