Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d18r
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   2.5  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.6  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 499 FRVVLHCHGNVRQC 540
           FR+   CHGN++ C
Sbjct: 343 FRMPHRCHGNLQSC 356


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 274 FSVNSTQNIFSPTRTEV 324
           F VNS++ + +PT T++
Sbjct: 23  FEVNSSEQLTTPTPTDI 39


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 720 GSAEALVSPFGNVWYYGLDGLGDNND 643
           G +E +V   G +    +D LG+NND
Sbjct: 64  GESEMMVVTSGVIPGVAVDFLGENND 89


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 24/77 (31%), Positives = 33/77 (42%)
 Frame = +2

Query: 221 LTFLVKEILSCLF*AFIILVSIAPKTFFLQLALKLQWSLPCENGKIVTFSGSAFCITT** 400
           L++   EI+  L   F IL     +  FL   L+L+      N ++   S S  C     
Sbjct: 177 LSYKASEIVVMLRSRFAILNK---QIRFLNQYLRLKPEGRISNRRVF-ISFSKICYLHQH 232

Query: 401 ASTSIKALNSGFGSSLL 451
            S S+K  N  FG SLL
Sbjct: 233 LSKSVKLFNEVFGVSLL 249


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 24/77 (31%), Positives = 33/77 (42%)
 Frame = +2

Query: 221 LTFLVKEILSCLF*AFIILVSIAPKTFFLQLALKLQWSLPCENGKIVTFSGSAFCITT** 400
           L++   EI+  L   F IL     +  FL   L+L+      N ++   S S  C     
Sbjct: 195 LSYKASEIVVMLRSRFAILNK---QIRFLNQYLRLKPEGRISNRRVF-ISFSKICYLHQH 250

Query: 401 ASTSIKALNSGFGSSLL 451
            S S+K  N  FG SLL
Sbjct: 251 LSKSVKLFNEVFGVSLL 267


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,081
Number of Sequences: 336
Number of extensions: 4304
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)