Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d18r
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.8  
AY745227-1|AAU93494.1|   99|Anopheles gambiae cytochrome P450 pr...    25   2.4  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   3.1  
AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450 pr...    25   3.1  
AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein prot...    24   4.1  
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    23   7.2  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +3

Query: 522 RQCSSMFQWLQRKGILRIS*NFQ*EQMQRFLPQAGIDP 635
           R+C S+ + +QRK  +R++  F+  + +  +  AG+ P
Sbjct: 816 RECRSLLKRVQRKAAIRVARTFRTVRYETAVLPAGLVP 853


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -1

Query: 162  EYKYAKNDIIMCGKNRGINTNEFVPKDEANVR 67
            +  Y  N + +CG N G   ++F+  D+  +R
Sbjct: 1824 DQSYFNNFVGLCGTNNGEGEDDFITPDQCVMR 1855


>AY745227-1|AAU93494.1|   99|Anopheles gambiae cytochrome P450
           protein.
          Length = 99

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = +2

Query: 455 KCPAPIYKCERRSKNFGSYFIATAMFVNVPMVTTERDPSYF 577
           +C  P      + +    Y I   M + +P+    RDP YF
Sbjct: 18  QCTLPEGSTGYKLEPLHDYVIPNGMPIMIPIYAIHRDPKYF 58


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 522 RQCSSMFQWLQRKGILRIS*NFQ*EQMQRFLPQAGIDP 635
           R+C  M Q +QRK  +R++  F+  + +     AG+ P
Sbjct: 861 RECRRMLQRVQRKAAIRVARAFRTVRYETATLLAGLVP 898


>AY745210-1|AAU93477.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 396 HVVMQKADPEKVTILPFSQGRLHC 325
           +VV ++A+P    +LPF  GR  C
Sbjct: 47  NVVNKRAEPGASVVLPFGIGRRMC 70


>AJ302656-1|CAC35521.1|  385|Anopheles gambiae gSG1b protein
           protein.
          Length = 385

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/52 (23%), Positives = 26/52 (50%)
 Frame = -1

Query: 537 LTNIAVAMKYDPKFLDRLSHLYIGAGHLYSKEDPKPEFNALMDVEAYHVVMQ 382
           + N+   ++  P   DR++  +    H+ + +D +    AL   +A+HVV +
Sbjct: 166 IANLLEFIRIVPARDDRVAFYHELKKHMVASKDYESYLGALFAADAFHVVYE 217


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 17/54 (31%), Positives = 21/54 (38%)
 Frame = -1

Query: 504 PKFLDRLSHLYIGAGHLYSKEDPKPEFNALMDVEAYHVVMQKADPEKVTILPFS 343
           PKF   +  L+ GA    S E       AL D+E Y         E +TI   S
Sbjct: 109 PKFFGTIGALFSGAATEISDEMKTTTQKALTDLEHYLTRNDYFAGENLTIADLS 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,373
Number of Sequences: 2352
Number of extensions: 18299
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)