Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d18f
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.0  
AY745227-1|AAU93494.1|   99|Anopheles gambiae cytochrome P450 pr...    25   1.8  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.4  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    24   3.1  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   3.1  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.2  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = -2

Query: 508 RQCSSMFQWLQRKGILRIS*NFQ*EQMQRFLPQAGIDP 395
           R+C S+ + +QRK  +R++  F+  + +  +  AG+ P
Sbjct: 816 RECRSLLKRVQRKAAIRVARTFRTVRYETAVLPAGLVP 853


>AY745227-1|AAU93494.1|   99|Anopheles gambiae cytochrome P450
           protein.
          Length = 99

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -1

Query: 575 KCPAPIYKCERRSKNFGSYFIATAMFVNVPMVTTERDPSYF 453
           +C  P      + +    Y I   M + +P+    RDP YF
Sbjct: 18  QCTLPEGSTGYKLEPLHDYVIPNGMPIMIPIYAIHRDPKYF 58


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 508 RQCSSMFQWLQRKGILRIS*NFQ*EQMQRFLPQAGIDP 395
           R+C  M Q +QRK  +R++  F+  + +     AG+ P
Sbjct: 861 RECRRMLQRVQRKAAIRVARAFRTVRYETATLLAGLVP 898


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 304 YRGSAEALVSPFGNVWYYGLDGLGDNNDSYTDLFPP 411
           +RG+   L  P G V  Y + G+ D  D      PP
Sbjct: 285 FRGARAILSGPAGGVVGYAVTGMRDAGDDDPAAGPP 320


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +1

Query: 304 YRGSAEALVSPFGNVWYYGLDGLGDNNDSYTDLFPP 411
           +RG+   L  P G V  Y + G+ D  D      PP
Sbjct: 285 FRGARAILSGPAGGVVGYAVTGMRDAGDDDPAAGPP 320


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = +1

Query: 43  HNYFWIVFCLSICCCVSATTNRPKYIIDNDA 135
           H++  +V CL +   + +    P ++ID+ A
Sbjct: 35  HSFTQLVLCLILSATLVSCNRAPVFLIDDHA 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,919
Number of Sequences: 2352
Number of extensions: 12191
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)