Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d17r
         (685 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    77   1e-16
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    69   3e-14
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   9.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   9.4  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 77.0 bits (181), Expect = 1e-16
 Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
 Frame = -1

Query: 685 VRQPRLNHKPFT--VTIDIKSDVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFV 512
           VR   L H+PFT  +T++ +S+       ++FL PK DE G P+   D  + F ELD F 
Sbjct: 472 VRFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPWLFRDQKIMFIELDKFT 531

Query: 511 QKVNPGQSQITRSSTDFAFFKEDSLPMAEIYKLLD----QGKIPTDMFNSSDT-MPSRLM 347
             +  GQ+ ITR+S+  +     ++P    ++ LD    QG      FN      P  ++
Sbjct: 532 VNLKQGQNTITRASSQSSV----TIPFERTFRNLDLNRPQGGEELAQFNFCGCGWPQHML 587

Query: 346 LPKGTYDGFPFQLFVFVYPYEPTPKESEP-------------FKSVVPDNKPFGYPFDR 209
           +PKGT +G   QLFV +  Y+    +                   + PD +  GYPFDR
Sbjct: 588 IPKGTPEGMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKLYPDRRSMGYPFDR 646


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
            subunit 1 protein.
          Length = 682

 Score = 69.3 bits (162), Expect = 3e-14
 Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 25/203 (12%)
 Frame = -1

Query: 685  VRQPRLNHKPFTVTIDIKSDVATN-AVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQ 509
            VR   L ++ FT  I + +         ++FL P++DE G P+   +    F ELD F  
Sbjct: 472  VRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDMFIELDRFAV 531

Query: 508  KVNPGQSQITRSSTDFAFFKEDSLPMAEIYKLLDQGKIPT-----DMFNSSDT-MPSRLM 347
             +  G + ITR ST+ +     ++P    ++ LD  + PT       FN      P  ++
Sbjct: 532  SLKQGTNTITRHSTESSL----TIPFERTFRNLDANR-PTGGDALSEFNFCGCGWPQHML 586

Query: 346  LPKGTYDGFPFQLFVFVYPY---------EPTPKESEPF----KSVVPDNKPFGYPFDRP 206
            LPKGT  G+P  LFV +  Y           T  + + F      + PD +  GYPFDR 
Sbjct: 587  LPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSMGYPFDRM 646

Query: 205  VLP-----QYFKQPNMFFKKVLV 152
                    Q F  PNM  ++V++
Sbjct: 647  PRDGVDTLQQFLTPNMRVQEVVI 669


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 444 SSLKNAKSVDERVI*DWP 497
           S L+NAK VDE ++ + P
Sbjct: 471 SQLRNAKKVDEAILEERP 488


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 676 PRLNHKPFTVTI 641
           P LNHKP  +TI
Sbjct: 259 PDLNHKPLNLTI 270


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 676 PRLNHKPFTVTI 641
           P LNHKP  +TI
Sbjct: 151 PDLNHKPLNLTI 162


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
 Frame = +2

Query: 353 PRRHSVRG---VEHVSRNLSLVQELVDFGHR*RVF 448
           P    +RG   V H   N S VQ+L   GH   VF
Sbjct: 214 PNGCQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVF 248


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
 Frame = +2

Query: 353 PRRHSVRG---VEHVSRNLSLVQELVDFGHR*RVF 448
           P    +RG   V H   N S VQ+L   GH   VF
Sbjct: 221 PNGCQIRGTFFVSHKYTNYSAVQDLHRRGHEIAVF 255


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = -1

Query: 175 MFFKKVLVYHEGELFPYLFNI 113
           ++F +++VY    + P L+N+
Sbjct: 333 LYFCRIMVYLNSAINPILYNL 353


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = -2

Query: 198 LSTSNNLTCSSRRSWSTMKENYSPIYLTFLTIHQIKRNYNA 76
           L   N +T     SW+ +    SP+Y + L     + N NA
Sbjct: 193 LDVINVMTYDFHGSWAGVTAQNSPLYASPLDGEWQRDNLNA 233


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 90  RNYNALIRKSKRTLTITSI 34
           RNY + I   KR + +TS+
Sbjct: 154 RNYGSSINMKKRFVVMTSV 172


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,318
Number of Sequences: 336
Number of extensions: 3403
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)