Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11d15f
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       25   0.37 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   6.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.1  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 108 GTARHRHEQHSESTENNGLH 49
           G    RHE+H ES+  N LH
Sbjct: 86  GDKHDRHERHFESSFGNNLH 105


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 574 ISFTVTTFLFKRRQENVKH 518
           ISF+V + L K+  E V+H
Sbjct: 12  ISFSVESLLSKKEDEEVEH 30


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 445 WNFFIATSINDVTFCCYCIYKKIKNVL 525
           W F +   I    F C  I KK+ ++L
Sbjct: 157 WLFILWVGILSTIFLCDTILKKVDDIL 183


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 268 RNCSCS*HTRFRMTWVSLLSFQRR*G 191
           RNCS      +R+ W+SL    ++ G
Sbjct: 217 RNCSAYIIAHYRVLWLSLSDLLQKMG 242


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 268 RNCSCS*HTRFRMTWVSLLSFQRR*G 191
           RNCS      +R+ W+SL    ++ G
Sbjct: 217 RNCSAYIIAHYRVLWLSLSDLLQKMG 242


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 478 VTFCCYCIYKKIKNVLRF 531
           + F C+ + K + NVLRF
Sbjct: 365 IGFNCFWVMKLLYNVLRF 382


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 268 RNCSCS*HTRFRMTWVSLLSFQRR*G 191
           RNCS      +R+ W+SL    ++ G
Sbjct: 217 RNCSAYIIAHYRVLWLSLSDLLQKMG 242


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 414 VILAYKTCFLLEFFY 458
           + LAY  CFLL  +Y
Sbjct: 1   MFLAYIACFLLLLYY 15


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 42  FQYEDHYFLCFRCVV 86
           FQ + H F C R +V
Sbjct: 290 FQLDAHEFACLRAIV 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,808
Number of Sequences: 336
Number of extensions: 2844
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)